RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Ablim1Q8K4G5 861 aa24.73■■□□□ 1.55
Upf3a-201ENSMUST00000043767 PdclQ9DBX2 301 aa24.73■■□□□ 1.55
Upf3a-201ENSMUST00000043767 FignQ9ERZ6 759 aa24.73■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Gm42715A0A087WP63 3095 aaKnown RBP24.72■■□□□ 1.55
Upf3a-201ENSMUST00000043767 ByslO54825 436 aaKnown RBP24.72■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Hoxd10P28359 340 aa24.72■■□□□ 1.55
Upf3a-201ENSMUST00000043767 rp9P97762 213 aa24.72■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Znf865Q3U3I9 1058 aa24.72■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Klra6Q60653 266 aa24.72■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Tcaf3Q6QR59 914 aa24.72■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Tmem117Q8BH18 514 aa24.72■■□□□ 1.55
Upf3a-201ENSMUST00000043767 1700020D05RikQ99PB1 294 aa24.72■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Hoxb13P70321 286 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Dpcr1Q3TNW5 500 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Tp53i13Q5F267 385 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Avpr1aQ62463 423 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Znf507Q6ZPY5 941 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Map3k11Q80XI6 850 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Pcdha2Q91Y17 948 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Castor1Q9CWQ8 331 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Med10Q9CXU0 135 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 4931423N10RikQ9D4J9 382 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 JmyQ9QXM1 983 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Tmem131O70472 1877 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Gm3409A0A0G2JE67 319 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Nr1i3O35627 358 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Map2k1P31938 393 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Clul1Q3ZRW6 464 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Xkr4Q5GH67 647 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 AsphQ8BSY0 741 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Lmo3Q8BZL8 145 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Leg1Q8C6C9 337 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Spata4Q8K3V1 295 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 NapgQ9CWZ7 312 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Mzb1Q9D8I1 188 aa24.71■■□□□ 1.55
Upf3a-201ENSMUST00000043767 Slc6a21A0A1B0GSD2 748 aa24.7■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Scarf2P59222 833 aa24.7■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Cep112Q5PR68 954 aa24.7■■□□□ 1.54
Upf3a-201ENSMUST00000043767 FntaQ61239 377 aa24.7■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Elac2Q80Y81 831 aaKnown RBP24.7■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Slc9a9Q8BZ00 644 aa24.7■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Plagl2Q925T4 496 aa24.7■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Sppl3Q9CUS9 384 aa24.7■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Drc3Q9D5E4 523 aa24.7■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Rsph3bQ9DA80 389 aa24.7■■□□□ 1.54
Upf3a-201ENSMUST00000043767 DonsonQ9QXP4 560 aa24.7■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Pds5aQ6A026 1332 aa24.7■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Kng1O08677 661 aa24.7■■□□□ 1.54
Upf3a-201ENSMUST00000043767 AfmO89020 608 aa24.7■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Cct6bQ61390 531 aa24.7■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Rnf208Q8K0W3 265 aa24.7■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Atp13a1Q9EPE9 1200 aaKnown RBP24.7■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Gon4lQ9DB00 2260 aa24.69■■□□□ 1.54
Upf3a-201ENSMUST00000043767 DgkhD3YXJ0 1156 aa24.69■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Actn4P57780 912 aaKnown RBP24.69■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Q5XFZ0 217 aa24.69■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Phlda1Q62392 405 aa24.69■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Ccpg1Q640L3 753 aa24.69■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Q66JV7 365 aa24.69■■□□□ 1.54
Upf3a-201ENSMUST00000043767 FAM120AQ6A0A9 1112 aaKnown RBP24.69■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Snd1Q78PY7 910 aaKnown RBP24.69■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Qsox1Q8BND5 748 aa24.69■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Q8C1R3 189 aa24.69■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Uap1Q91YN5 522 aa24.69■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Maged1Q9QYH6 775 aaKnown RBP24.69■■□□□ 1.54
Upf3a-201ENSMUST00000043767 IkbkbO88351 757 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Slc3a2P10852 526 aaKnown RBP24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 ItgadQ3V0T4 1168 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Skiv2lQ6NZR5 1244 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Plekha4Q8VC98 588 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Smc1bQ920F6 1248 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Grtp1Q9D3N8 359 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Gm15262A0A140LIQ5 728 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Cnbd1B1AWM0 430 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Ccdc152E9PX14 254 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Zfp408H7BX78 710 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Cyp2c37P56654 490 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Tbx3P70324 741 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Oas1fQ14AZ4 364 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Mief2Q5NCS9 454 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Cyp2c54Q6XVG2 490 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Klhl11Q8CE33 709 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Rpp40Q8R1F9 363 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Fubp1Q91WJ8 651 aaKnown RBP24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Cyp2c50Q91X77 490 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Polr3eQ9CZT4 710 aa24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Hyou1Q9JKR6 999 aaKnown RBP24.68■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Gm13084A2A8N0 494 aa24.67■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Exoc3l2D3YUP5 789 aa24.67■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Vmn2r87E9PZX4 848 aa24.67■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Arf4P61750 180 aa24.67■■□□□ 1.54
Upf3a-201ENSMUST00000043767 SpoplQ2M2N2 392 aa24.67■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Smyd5Q3TYX3 416 aa24.67■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Srebf2Q3U1N2 1130 aa24.67■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Rapgef1Q3UHC1 1224 aa24.67■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Lrrn2Q6PHP6 730 aa24.67■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Znf579Q80VM4 562 aa24.67■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Zbed4Q80WQ9 1168 aa24.67■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Trmt10bQ9D075 318 aa24.67■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Cst12Q9DAN8 128 aa24.67■■□□□ 1.54
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms