RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 GanQ8CA72 597 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Qtrt2B8ZXI1 415 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 InhbeO08717 350 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Ccna2P51943 422 aaKnown RBP17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Gm156Q58A37 223 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Abcf3Q8K268 709 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Pcdhb21Q91V48 774 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Rfc4Q99J62 364 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Rabgap1lA6H6A9 815 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 NfrkbQ6PIJ4 1296 aaKnown RBP17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Ip6k2Q80V72 448 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 FdpsQ920E5 353 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Cse1lQ9ERK4 971 aaKnown RBP17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Gm3371F7CQW8 167 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Rccd1Q8BTU7 377 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Irak1Q62406 710 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Clca1Q9D7Z6 913 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Arhgef37A1IGU4 676 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Eif2s1Q6ZWX6 315 aaKnown RBP17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Dnajc6Q80TZ3 938 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Fam20aQ8CID3 541 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Abca9Q8K449 1623 aa17.48■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Zc3hav1Q3UPF5 946 aaKnown RBP17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Tnfaip2Q61333 691 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Tlr13Q6R5N8 991 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Hacd3Q8K2C9 362 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Cd2apQ9JLQ0 637 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 CdylQ9WTK2 593 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Stag2O35638 1231 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Hcn2O88703 863 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Sox6P40645 827 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Mark3Q03141 753 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Gm44G3UW88 330 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Utp6Q8VCY6 597 aaKnown RBP17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Myo3aQ8K3H5 1613 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Tex28B1AYN9 409 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Krt16Q9Z2K1 469 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Arhgef26D3YYY8 869 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Ddr2Q62371 854 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Olfr1415Q7TQS4 311 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Olfr1416Q8VGU4 312 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Kbtbd12Q9D618 625 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Trpc5Q9QX29 975 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Serpind1P49182 478 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Hps5P59438 1126 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Foxred2Q3USW5 665 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 SpdyaQ5IBH7 310 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Klhl12Q8BZM0 568 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Vmn1r214Q8R279 367 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Cadm1Q8R5M8 456 aaKnown RBP17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Olfr390Q8VEZ7 311 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Msr1P30204 458 aaKnown RBP17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Lig1P37913 916 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 CiitaP79621 1155 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Dok7Q18PE0 504 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Dhx40Q6PE54 779 aaKnown RBP17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Trim47Q8C0E3 641 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Mageb16Q9CWV4 363 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Stx11Q9D3G5 287 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Speer4cG3UXD1 256 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Wdr35Q8BND3 1181 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Cib4Q9D9N5 185 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 PtsQ9R1Z7 144 aa17.47■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Trim8Q99PJ2 551 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Nfe2l3Q9WTM4 660 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Prkg1P0C605 671 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Gm10392Q3V3I3 114 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Pcdhb14Q6PB90 796 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Eif4enif1Q9EST3 983 aaKnown RBP17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 TpbpaP13438 124 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Ttc39dQ0VF76 604 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Bcap31Q61335 245 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Rbm12b1Q80YR9 836 aaKnown RBP17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 SgczQ8BX51 311 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 PccaQ91ZA3 724 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Ubxn8Q9QZ49 277 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Zfp788E9Q980 884 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Top3bQ9Z321 862 aaKnown RBP17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Gm1758F6VZZ1 202 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Gm17019K7N6W5 255 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Slc12a1P55014 1095 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Prpf18Q8BM39 342 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Ttc22Q8C159 568 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Cacna1cQ01815 2139 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Gm13023A2A8N2 498 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Acap2Q6ZQK5 770 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Ano4Q8C5H1 955 aa17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Twf1Q91YR1 350 aaKnown RBP17.46■□□□□ 0.39
Ccdc88a-201ENSMUST00000040182 Ace3D0G895 737 aa17.46■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Serpina5P70458 405 aa17.46■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Cep295nlQ497N6 533 aa17.46■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Nt5c3aQ9D020 331 aa17.46■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Mtmr2Q9Z2D1 643 aa17.46■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Efna5O08543 228 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Kcna2P63141 499 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Rpn2Q9DBG6 631 aaKnown RBP17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Gm3182K7N6T8 263 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Extl3Q9WVL6 918 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Zfp266E9Q2S7 604 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Slc27a6E9Q9W4 619 aa17.45■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms