RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Pabpc6Q9D4E6 643 aaKnown RBP19.57■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Acot3Q9QYR7 432 aa19.57■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Hspa8P63017 646 aaKnown RBP19.57■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Ssxb10Q6XAR7 170 aa19.57■□□□□ 0.72
Ebf3-201ENSMUST00000033378 RubcnQ80U62 956 aa19.57■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Kbtbd4Q8R179 534 aa19.57■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Bzw1Q9CQC6 419 aaKnown RBP19.57■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Mss51Q9D5Z5 446 aa19.57■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Dip2aQ8BWT5 1523 aa19.57■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Ccdc62E9PVD1 701 aa19.57■□□□□ 0.72
Ebf3-201ENSMUST00000033378 StilQ60988 1262 aa19.57■□□□□ 0.72
Ebf3-201ENSMUST00000033378 EregQ61521 162 aa19.57■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Glis3Q6XP49 780 aa19.57■□□□□ 0.72
Ebf3-201ENSMUST00000033378 A430089I19RikQ8C9W1 407 aa19.57■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Pcdha5Q91Y15 934 aa19.57■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Usp14Q9JMA1 493 aaKnown RBP19.57■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Tjp2Q9Z0U1 1167 aaKnown RBP19.57■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Glt1d1A4FUP9 346 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Akr1b10G5E895 316 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Trim43bP86448 445 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Atp13a5Q3TYU2 1216 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 FancbQ5XJY6 703 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Dsg1aQ61495 1057 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Znf148Q61624 794 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Pim2Q62070 370 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Rnf168Q80XJ2 565 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Ttc7aQ8BGB2 858 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Hspbp1Q99P31 357 aaKnown RBP19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Psmd9Q9CR00 222 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Scgb2b11A0A087WR49 112 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Gm13084A2A8N0 494 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Mark3Q03141 753 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Gm1604bQ3TRG0 118 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Ttc16Q8C1F5 767 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Tekt1Q9DAJ2 418 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Rfx8D3YU81 596 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Gm379J3QQ19 296 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 PnocQ64387 187 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Slc39a11Q8BWY7 342 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Reep2Q8VCD6 254 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Cdk5rap3Q99LM2 503 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Hic1Q9R1Y5 733 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Entpd5Q9WUZ9 427 aa19.56■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Atp11cQ9QZW0 1129 aa19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 CtsfQ9R013 462 aa19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 SmapQ9R0P4 181 aaKnown RBP19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Prl3b1P09586 222 aa19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Lzts1P60853 599 aa19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 P2ry10Q8BFU7 328 aa19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Kirrel3Q8BR86 778 aa19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Nt5c3aQ9D020 331 aa19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 ParvaQ9EPC1 372 aa19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Kcna3P16390 528 aa19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Gdf10P97737 476 aa19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Cnksr2Q80YA9 1032 aa19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Serpina1aP07758 413 aa19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Nol4P60954 483 aa19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Psmc5P62196 406 aa19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Serpina1cQ00896 412 aa19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Serpina1dQ00897 413 aa19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Cdca2Q14B71 982 aaKnown RBP19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Khdrbs1Q60749 443 aaKnown RBP19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Atp4aQ64436 1033 aa19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 NonoQ99K48 473 aaKnown RBP19.55■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Pfdn6Q03958 127 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 FntaQ61239 377 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Baiap3Q80TT2 1134 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Myoz2Q9JJW5 264 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Gm3424L7N298 263 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Gm8246M0QWX9 263 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Heatr9Q5QNV8 569 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Peg10Q7TN75 958 aaKnown RBP19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Dnajc5gQ8C632 165 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Gga1Q8R0H9 635 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Smyd3Q9CWR2 428 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Prpf4Q9DAW6 521 aaKnown RBP19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Ercc6l2Q9JIM3 1537 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Usp31E9Q6Y8 1344 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 CluhQ5SW19 1315 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Klc1O88447 541 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 RenbpP82343 430 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Atp9bP98195 1146 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Hif1aQ61221 836 aaKnown RBP19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Snx19Q6P4T1 997 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Atp6v0d2Q80SY3 350 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 PlekQ9JHK5 350 aaKnown RBP19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Zcchc11B2RX14 1644 aaKnown RBP19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Stmn1P54227 149 aaKnown RBP19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Faf1P54731 649 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Plekha7Q3UIL6 1118 aaKnown RBP19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Rnf10Q3UIW5 804 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Gm4981Q3ULJ8 291 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Dclk2Q6PGN3 756 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Gprasp2Q8BUY8 826 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Rps6ka4Q9Z2B9 773 aa19.54■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Gm3371F7CQW8 167 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Usp10P52479 792 aaKnown RBP19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Eif3eP60229 445 aaKnown RBP19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 MtbpQ8BJS8 894 aaKnown RBP19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Cd248Q91V98 765 aa19.53■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms