RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Xrcc5P27641 732 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Adamts10P58459 1104 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Taf1bP97358 586 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Ugt1a9Q62452 528 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Ehbp1Q69ZW3 1231 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 FtoQ8BGW1 502 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 HlcsQ920N2 722 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Taf1dQ9D4V4 322 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 PrameQ9D4Z5 464 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Olig1Q9JKN5 260 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Stat2Q9WVL2 923 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Mical3Q8CJ19 1993 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Myo1eE9Q634 1107 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Phka1P18826 1241 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Ctnnd1P30999 938 aaKnown RBP13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Irf6P97431 467 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 GmpsQ3THK7 693 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Capn13Q3UW68 665 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Ccdc125Q5U465 500 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 E330017A01RikQ8BU47 192 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Apol9bQ8C7I4 310 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Apol9aQ8VDU3 310 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Nudt12Q9DCN1 462 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 IydQ9DCX8 285 aa13.65□□□□□ -0.22
Rnf4-201ENSMUST00000030992 Col4a3Q9QZS0 1669 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Zgrf1Q0VGT4 1863 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Axin2O88566 840 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Wfs1P56695 890 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Adad1Q5SUE7 619 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Gcfc2Q8BKT3 769 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 BbxQ8VBW5 907 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Rhobtb2Q91V93 728 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Pcdha2Q91Y17 948 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Ccdc91Q9D8L5 442 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Cyp2s1Q9DBX6 501 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Fam171a1A2ATK9 892 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Cfap221A9Q751 836 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Pitpnm1O35954 1243 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 PrkceP16054 737 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Actr2P61161 394 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Kcna2P63141 499 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Frg1P97376 258 aaKnown RBP13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Ica1lQ3TY65 431 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Abi3bpQ59IW6 1179 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Sv2cQ69ZS6 727 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Cnot10Q8BH15 744 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Rassf2Q8BMS9 326 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Hook3Q8BUK6 718 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Ino80bQ99PT3 375 aaKnown RBP13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Ssr1Q9CY50 286 aaKnown RBP13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Zfp623Q9CY99 499 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Tmod2Q9JKK7 351 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Prmt2Q9R144 448 aa13.64□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Sbno2Q7TNB8 1349 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Clca3bE9PUL3 1044 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Vmn2r15L7N2A0 855 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Akr1b8P45377 316 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Atp8a1P70704 1164 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Retreg2Q6NS82 541 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Azin2Q8BVM4 459 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Epc2Q8C0I4 808 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Lrrc45Q8CIM1 670 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Fermt3Q8K1B8 665 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 H2-OaQ9QWV1 250 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Brca1P48754 1812 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Taf1Q80UV9 1891 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Glt1d1A4FUP9 346 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Mms22lB1AUR6 1238 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Prdm15E9Q8T2 1174 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Tgfb2P27090 414 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Fmr1P35922 614 aaKnown RBP13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Hdgfl1Q2VPR5 283 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Sema5aQ62217 1077 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Gga2Q6P5E6 603 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Fsd1lQ8BYN5 507 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Q922C1 641 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Tlr3Q99MB1 905 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 CalcbQ99MP3 130 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Snx24Q9CRB0 169 aa13.63□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Zscan4-ps3A0A1B0GRH6 506 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Zscan4-ps2A0A1C7CYU6 506 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Bpifb9bA2AJD1 591 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Rhox5P52651 210 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Wdr18Q4VBE8 431 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Sema5bQ60519 1093 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Kcnk18Q6VV64 394 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Bpifb9aQ80XI7 591 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Ppfia2Q8BSS9 1257 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Polr3fQ921X6 316 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Ndufab1Q9CR21 156 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Rab11fip1Q9D620 645 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Rilpl1Q9JJC6 406 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Trpc5Q9QX29 975 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 SisF8VQM5 1818 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Hsf3D0VYS2 492 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Rasal2E9PW37 1286 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Tbx3P70324 741 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Flt3Q00342 1000 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Mybpc2Q5XKE0 1136 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Rnf139Q7TMV1 668 aa13.62□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 42.3 ms