RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Rasip1Q3U0S6 961 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Ptk6Q64434 451 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Fhod1Q6P9Q4 1197 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Recql4Q75NR7 1216 aaKnown RBP13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Suds3Q8BR65 328 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Nemp2Q8CB65 421 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Q8R1Y2 203 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Eno3P21550 434 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Akr1b1P45376 316 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Stip1Q60864 543 aaKnown RBP13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Arhgap15Q811M1 481 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Btbd7Q8CFE5 1130 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Grin3bQ91ZU9 1003 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Pdia6Q922R8 440 aaKnown RBP13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Plagl2Q925T4 496 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Ubxn2aQ99KJ0 258 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Trpc4Q9QUQ5 974 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Vmn2r87E9PZX4 848 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Atxn10P28658 475 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Ifnar1P33896 590 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Irf5P56477 497 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Pstpip1P97814 415 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Gsdmc4Q3TR54 480 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Mif4gdQ3UBZ5 222 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Mrgprx1Q8CIP3 322 aa13.03□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Mst1rQ62190 1378 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 LmnaP48678 665 aaKnown RBP13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Gdf10P97737 476 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Znf579Q80VM4 562 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Usp38Q8BW70 1042 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Phka2Q8BWJ3 1235 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Osbpl2Q8BX94 484 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Trpm8Q8R4D5 1104 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 MajinQ9D992 256 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Rasgrp1Q9Z1S3 795 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 A630010A05RikA9C473 232 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Hoxb8P09632 243 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Ccdc33Q3ULW6 985 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Myo19Q5SV80 963 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Itih3Q61704 889 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Creb3Q61817 404 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Lyve1Q8BHC0 318 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 A430089I19RikQ8C9W1 407 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Actl9Q8CG27 415 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Cdk17Q8K0D0 523 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Tgif2lx2Q8K5B9 231 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Stx19Q8R1Q0 292 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Cdk5rap3Q99LM2 503 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Snx2Q9CWK8 519 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Capn9Q9D805 690 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Cyp39a1Q9JKJ9 470 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Ifi202Q9R002 445 aa13.02□□□□□ -0.32
Ldb3-201ENSMUST00000022327 Hsf3D0VYS2 492 aa13.02□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Gm20721E9Q2U8 318 aa13.02□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Fam167bP17257 162 aa13.02□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Uhmk1P97343 419 aa13.02□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Olfr1415Q7TQS4 311 aa13.02□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Reep2Q8VCD6 254 aa13.02□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Olfr1416Q8VGU4 312 aa13.02□□□□□ -0.33
Ldb3-201ENSMUST00000022327 MlphQ91V27 590 aa13.02□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Scrn1Q9CZC8 414 aa13.02□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Tktl2Q9D4D4 627 aa13.02□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Dnajc7Q9QYI3 494 aa13.02□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Abcc10Q8R4P9 1501 aa13.02□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Cyth2P63034 400 aaKnown RBP13.02□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Ckap2lQ7TS74 745 aa13.02□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Llgl1Q80Y17 1036 aa13.02□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Fgd4Q91ZT5 766 aa13.02□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Atp13a1Q9EPE9 1200 aaKnown RBP13.02□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Ing2Q9ESK4 281 aa13.02□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Atp2c2A7L9Z8 944 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Erich2E9Q1A6 463 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Gm3893E9Q1I1 302 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Trappc3O55013 180 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Eif3eP60229 445 aaKnown RBP13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Ap5z1Q3U829 807 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Rab3ipQ68EF0 428 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Ube3cQ80U95 1083 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Pgm1Q9D0F9 562 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Psmd10Q9Z2X2 231 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Serpinb6cW4VSP4 379 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Pramel3A2AHA7 463 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Gm7903A2AWL1 463 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 AV320801A2AWL3 467 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Rad51ap2G3UW63 976 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Gm15023L7MUB4 467 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Cacna2d1O08532 1103 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Hmx1O70218 332 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Gbp10Q000W5 611 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Rpusd2Q149F1 553 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Serpinb6dQ3UWK8 375 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Mrpl47Q8K2Y7 252 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 OtoaQ8K561 1137 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Lrrc14Q8VC16 493 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Mtmr6Q8VE11 617 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Ddx56Q9D0R4 546 aaKnown RBP13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 GgcxQ9QYC7 757 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Zfyve9A2A8R0 1397 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Satb1Q60611 764 aa13.01□□□□□ -0.33
Ldb3-201ENSMUST00000022327 Ints2Q80UK8 1198 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms