RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Sin3bQ62141 1098 aa12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 CapslQ6P8Y1 208 aa12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Thoc7Q7TMY4 204 aaKnown RBP12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Ddhd1Q80YA3 547 aa12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Kcnv1Q8BZN2 503 aa12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Pcdhga11Q91XY8 933 aa12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Zcchc12Q9CZA5 402 aa12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Lrrc10bG3XA50 292 aa12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Usp35M0QWN7 1009 aa12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Psmd7P26516 321 aa12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Kpnb1P70168 876 aaKnown RBP12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Uhmk1P97343 419 aa12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Mark2Q05512 776 aa12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Trappc10Q3TLI0 1259 aa12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Olfm4Q3UZZ4 505 aa12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Foxn3Q499D0 457 aa12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 CluhQ5SW19 1315 aa12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Mysm1Q69Z66 819 aa12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Dclk3Q8BWQ5 790 aa12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Prpf40aQ9R1C7 953 aaKnown RBP12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Krt16Q9Z2K1 469 aa12.29□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Znf711A2ANX9 761 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Zbed6D2EAC2 980 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Gm5934D3Z4U6 212 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Kif6E9PX57 802 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Morc3F7BJB9 942 aaKnown RBP12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Zfp212G3X8R7 492 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Art2bO35975 289 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Aff2O55112 1272 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Cyth2P63034 400 aaKnown RBP12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Bend4P86174 541 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Ttbk2Q3UVR3 1243 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Fxr1Q61584 677 aaKnown RBP12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Map3k7Q62073 579 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Hirip3Q8BLH7 601 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Ttc39bQ8BYY4 617 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Tmem120aQ8C1E7 343 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Arfip2Q8K221 341 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Mtfr1lQ9CWE0 289 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Lrrc57Q9D1G5 239 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 IscuQ9D7P6 168 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 DcpsQ9DAR7 338 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 PodxlQ9R0M4 503 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Nlrp5Q9R1M5 1163 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Gbp1Q01514 589 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Zfp781Q0P5U5 243 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Tmem120bQ3TA38 339 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Tmem35bQ3U0Y2 150 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Plekha7Q3UIL6 1118 aaKnown RBP12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Shc3Q61120 474 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Zpbp2Q6X786 326 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Gcfc2Q8BKT3 769 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Ccdc134Q8C7V8 229 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Ccdc87Q8CDL9 855 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Actl9Q8CG27 415 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Agap3Q8VHH5 910 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Gimap4Q99JY3 219 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Spata17Q9D552 379 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Pacsin2Q9WVE8 486 aaKnown RBP12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 GabreA2AMW3 916 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Olfr1145A2AVC7 325 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Mboat4P0C7A3 435 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Cdk7Q03147 346 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Cog7Q3UM29 770 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 ItgaeQ60677 1167 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Haus6Q6NV99 933 aaKnown RBP12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Bbs9Q811G0 885 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Fate1Q8CEK7 99 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Kcnv2Q8CFS6 562 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Slc4a8Q8JZR6 1089 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 OtoaQ8K561 1137 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Dph5Q9CWQ0 281 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Rex1bdQ9CYZ6 169 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 EhhadhQ9DBM2 718 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 IkbipQ9DBZ1 373 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Tlr2Q9QUN7 784 aa12.28□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Col11a2Q64739 1736 aa12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 SrcapA0A087WQ44 3271 aa12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Rab17P35292 214 aa12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Snap25P60879 206 aa12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Atp13a3Q5XF89 1219 aa12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Zdhhc24Q6IR37 284 aa12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Retreg2Q6NS82 541 aa12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Arhgef18Q6P9R4 1021 aa12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Mtss1lQ6P9S0 715 aa12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Chn2Q80XD1 332 aa12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 BC048507Q80ZS7 89 aa12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Lrrc41Q8K1C9 807 aa12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Atxn7Q8R4I1 867 aa12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Pagr1aQ99L02 253 aa12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Mms19Q9D071 1031 aa12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Sapcd2Q9D818 391 aa12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Prpf4Q9DAW6 521 aaKnown RBP12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Leng1Q9DB98 261 aa12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Add1Q9QYC0 735 aaKnown RBP12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Atp6v0a1Q9Z1G4 839 aaKnown RBP12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Psmd10Q9Z2X2 231 aa12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Arfgef1G3X9K3 1846 aaKnown RBP12.27□□□□□ -0.44
Sdc1-201ENSMUST00000020911 Fam186bD3Z420 943 aa12.27□□□□□ -0.45
Sdc1-201ENSMUST00000020911 Casq2O09161 415 aa12.27□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms