RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Vps39Q8R5L3 886 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Pglyrp2Q8VCS0 530 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 OoepQ9CWE6 164 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 4921524L21RikQ9D5T2 438 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Trmt112Q9DCG9 125 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 ArcQ9WV31 396 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Plekhg4A0A1L1SU27 1217 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Etnk2A7MCT6 385 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 F830016B08RikG3UWE2 416 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Gm3424L7N298 263 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Gm8246M0QWX9 263 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Cyp2j6O54750 501 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Kcna2P63141 499 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 NpeppsQ11011 920 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Trmt10cQ3UFY8 414 aaKnown RBP12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Hdgfl2Q3UMU9 669 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Ddx3xQ62167 662 aaKnown RBP12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Zfp454Q80Y34 536 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Mrpl47Q8K2Y7 252 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Gga1Q8R0H9 635 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Tmem192Q9CXT7 266 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 NkapQ9D0F4 415 aaKnown RBP12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 PodxlQ9R0M4 503 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Rasgrp1Q9Z1S3 795 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 OmdO35103 423 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Nr5a1P33242 462 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 MyrfQ3UR85 1138 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Rexo4Q6PAQ4 432 aaKnown RBP12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Klhl25Q8R2P1 589 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Lrrc59Q922Q8 307 aaKnown RBP12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 LrmdaQ9D9B4 229 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Klra17Q9JMA4 273 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Fut8Q9WTS2 575 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Mageb2A2AHM0 380 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Apol11bE9PUZ0 337 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Srp72F8VQC1 671 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Syce2Q505B8 171 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Tp53bp2Q8CG79 1128 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Plcg2Q8CIH5 1265 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Mageb3Q9D2H4 330 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 1700016D06RikQ9DAA5 166 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Tagln3Q9R1Q8 199 aa12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Arhgef12Q8R4H2 1543 aaKnown RBP12.88□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Gm29554A0A087WNW4 188 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Gm5689F6Y2A6 97 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Inpp1P49442 396 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Itih2Q61703 946 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Cyp3a13Q64464 503 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 AmotQ8VHG2 1126 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Top3bQ9Z321 862 aaKnown RBP12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 ZfrO88532 1074 aaKnown RBP12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Ifnb1P01575 182 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Rag1P15919 1040 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Vps4bP46467 444 aaKnown RBP12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Usp1Q8BJQ2 784 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Tsen34Q8BMZ5 316 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Znf451Q8C0P7 1056 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Vps50Q8CI71 964 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Fam192aQ91WE2 254 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Eaf2Q91ZD6 262 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 RtcbQ99LF4 505 aaKnown RBP12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Timm50Q9D880 353 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Gm16486A0A1D5RMD1 1434 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Tom1O88746 492 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Zbtb7aO88939 569 aaKnown RBP12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Meis3P97368 378 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 RnaselQ05921 735 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 InscQ3HNM7 579 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Odr4Q4PJX1 447 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Ddx17Q501J6 650 aaKnown RBP12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Slc9a1Q61165 820 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Pus7lQ8CE46 702 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Lsm14aQ8K2F8 462 aaKnown RBP12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 GaleQ8R059 347 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Ces1Q8VCC2 565 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Q91WD4 421 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Unc45aQ99KD5 944 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Chordc1Q9D1P4 331 aaKnown RBP12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Fam227aQ9D3V8 625 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 AI481877A2ALV5 1481 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Gapvd1Q6PAR5 1458 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Myl2P51667 166 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Atp9bP98195 1146 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Ankrd27Q3UMR0 1048 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 ItgaeQ60677 1167 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Mrps31Q61733 384 aaKnown RBP12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Miga2Q8BK03 593 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 BlmhQ8R016 455 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Alpk1Q9CXB8 1231 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Copg1Q9QZE5 874 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Scnn1bQ9WU38 638 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Tekt5G5E8A8 557 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Foxp2P58463 714 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Pald1P70261 859 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Shcbp1lQ3TTP0 639 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Enoph1Q8BGB7 257 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Cog3Q8CI04 820 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Sh2d3cQ9QZS8 854 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Dlc1Q9R0Z9 1092 aa12.87□□□□□ -0.35
Pcdhac1-201ENSMUST00000007584 Rims1Q99NE5 1463 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms