RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 PtenO08586 403 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Pde8aO88502 823 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Sema3eP70275 775 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Ppp1r13lQ5I1X5 824 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Oca2Q62052 833 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Q6DFW0 481 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Dzip3Q7TPV2 1204 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Klhl29Q80T74 875 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Cwf19l1Q8CI33 537 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Igf2bp3Q9CPN8 579 aaKnown RBP17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Rasal2E9PW37 1286 aa17.35■□□□□ 0.37
Trim28-201ENSMUST00000005705 Cdc25aP48964 514 aa17.35■□□□□ 0.37
Trim28-201ENSMUST00000005705 Smarcad1Q04692 1021 aa17.35■□□□□ 0.37
Trim28-201ENSMUST00000005705 CcnjlQ5SRT8 387 aa17.35■□□□□ 0.37
Trim28-201ENSMUST00000005705 Gga2Q6P5E6 603 aa17.35■□□□□ 0.37
Trim28-201ENSMUST00000005705 Psmd5Q8BJY1 504 aa17.35■□□□□ 0.37
Trim28-201ENSMUST00000005705 Cd248Q91V98 765 aa17.35■□□□□ 0.37
Trim28-201ENSMUST00000005705 Nedd1P33215 660 aa17.35■□□□□ 0.37
Trim28-201ENSMUST00000005705 Oprl1P35377 367 aa17.35■□□□□ 0.37
Trim28-201ENSMUST00000005705 Gm10488Q4KL05 212 aa17.35■□□□□ 0.37
Trim28-201ENSMUST00000005705 Trim21Q62191 470 aa17.35■□□□□ 0.37
Trim28-201ENSMUST00000005705 Slc26a7Q8R2Z3 656 aa17.35■□□□□ 0.37
Trim28-201ENSMUST00000005705 Kcnh7Q9ER47 1195 aa17.35■□□□□ 0.37
Trim28-201ENSMUST00000005705 IdeQ9JHR7 1019 aa17.35■□□□□ 0.37
Trim28-201ENSMUST00000005705 Adam22Q9R1V6 904 aa17.35■□□□□ 0.37
Trim28-201ENSMUST00000005705 Zfp831A2ADM8 1628 aa17.35■□□□□ 0.37
Trim28-201ENSMUST00000005705 Lama3Q61789 3330 aa17.35■□□□□ 0.37
Trim28-201ENSMUST00000005705 Slc27a3O88561 667 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Vil1Q62468 827 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 WdpcpQ8C456 722 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Ccdc15Q8C9M2 810 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Gm4297D3YWB7 211 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Wnt7bP28047 349 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Tmem165P52875 323 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Lrch1P62046 709 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 L3mbtl3Q8BLB7 883 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Drd5Q8BLD9 478 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Ppfia2Q8BSS9 1257 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Gprasp2Q8BUY8 826 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Rsad2Q8CBB9 362 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Inpp5fQ8CDA1 1132 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 HibchQ8QZS1 385 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Fkbp6Q91XW8 327 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Golga1Q9CW79 758 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Rasgef1cQ9D300 466 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 FibpQ9JI19 357 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Xrcc5P27641 732 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Tmem120bQ3TA38 339 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Lamc2Q61092 1191 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Cypt2Q6P924 180 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 B4galnt4Q766D5 1034 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Wnk4Q80UE6 1222 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Phf20Q8BLG0 1010 aaKnown RBP17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Ccdc169Q8BXX9 214 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Calhm6Q8C9E8 313 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Dppa3Q8QZY3 150 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Rbm31yQ9D3U4 565 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Ddx24Q9ESV0 857 aaKnown RBP17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Prmt2Q9R144 448 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Pdcd7Q9WTY1 482 aa17.34■□□□□ 0.37
Trim28-201ENSMUST00000005705 Tbc1d16A2ABG4 766 aa17.33■□□□□ 0.37
Trim28-201ENSMUST00000005705 Cyp4f40G3UW81 524 aa17.33■□□□□ 0.37
Trim28-201ENSMUST00000005705 CnpP16330 420 aa17.33■□□□□ 0.37
Trim28-201ENSMUST00000005705 Wdr41Q3UDP0 460 aa17.33■□□□□ 0.37
Trim28-201ENSMUST00000005705 Krt77Q6IFZ6 572 aa17.33■□□□□ 0.37
Trim28-201ENSMUST00000005705 LnpkQ7TQ95 425 aa17.33■□□□□ 0.37
Trim28-201ENSMUST00000005705 Ero1aQ8R180 464 aa17.33■□□□□ 0.37
Trim28-201ENSMUST00000005705 Cd300ldQ8VCH2 221 aa17.33■□□□□ 0.37
Trim28-201ENSMUST00000005705 Borcs6Q9D6W8 360 aa17.33■□□□□ 0.37
Trim28-201ENSMUST00000005705 Serpinb8O08800 374 aaKnown RBP17.33■□□□□ 0.36
Trim28-201ENSMUST00000005705 Flot1O08917 428 aa17.33■□□□□ 0.36
Trim28-201ENSMUST00000005705 Calb1P12658 261 aa17.33■□□□□ 0.36
Trim28-201ENSMUST00000005705 Rbm12b1Q80YR9 836 aaKnown RBP17.33■□□□□ 0.36
Trim28-201ENSMUST00000005705 Ankfy1Q810B6 1169 aa17.33■□□□□ 0.36
Trim28-201ENSMUST00000005705 Tarsl2Q8BLY2 790 aa17.33■□□□□ 0.36
Trim28-201ENSMUST00000005705 PhykplQ8R1K4 467 aa17.33■□□□□ 0.36
Trim28-201ENSMUST00000005705 Trpm8Q8R4D5 1104 aa17.33■□□□□ 0.36
Trim28-201ENSMUST00000005705 Plekhh3Q8VCE9 796 aa17.33■□□□□ 0.36
Trim28-201ENSMUST00000005705 Bag2Q91YN9 210 aa17.33■□□□□ 0.36
Trim28-201ENSMUST00000005705 Cpb2Q9JHH6 422 aa17.33■□□□□ 0.36
Trim28-201ENSMUST00000005705 Ace3D0G895 737 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Zfp457L7N1X4 647 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 P01734 135 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Ptprn2P80560 1001 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Cul4aQ3TCH7 759 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Znf583Q3V080 568 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Tfe3Q64092 572 aaKnown RBP17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Wdr60Q8C761 999 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Rnf103Q9R1W3 683 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Vmn2r77L7N2B7 854 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Apba3O88888 571 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Rrm1P07742 792 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Fcer2P20693 331 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Abi2P62484 446 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Casp4P70343 373 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 G3bp2P97379 482 aaKnown RBP17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Mtus1Q5HZI1 1210 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 ChukQ60680 745 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Gbp4Q61107 620 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Rnaseh2bQ80ZV0 308 aa17.32■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 51.7 ms