RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Mt-CybP00158 381 aa13.57□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Dph1Q5NCQ5 438 aa13.57□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Sh3gl2Q62420 352 aa13.57□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Tdrd3Q91W18 743 aaKnown RBP13.57□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Myh2G3UW82 1942 aa13.57□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Sipa1l3G3X9J0 1776 aa13.57□□□□□ -0.24
Clcn3-201ENSMUST00000004430 PtproE9Q612 1226 aa13.57□□□□□ -0.24
Clcn3-201ENSMUST00000004430 C130060K24RikG3UWA8 416 aa13.57□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Flot1O08917 428 aa13.57□□□□□ -0.24
Clcn3-201ENSMUST00000004430 KitP05532 979 aa13.57□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Tph1P17532 447 aa13.57□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Gpr162Q3UN16 588 aa13.57□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Syne3Q4FZC9 975 aa13.57□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Fbxl13Q8CDU4 790 aa13.57□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Reep2Q8VCD6 254 aa13.57□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Bap1Q99PU7 728 aa13.57□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Serpina9Q9D7D2 418 aa13.57□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Mtmr9Q9Z2D0 545 aa13.57□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Arhgef10lA2AWP8 1280 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Mmrn2A6H6E2 943 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Scgb2b7D3YYY1 112 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Serpina3iD3Z450 408 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Erich2E9Q1A6 463 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 PctpP53808 214 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Gdpd4Q3TT99 632 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Atp13a5Q3TYU2 1216 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Ssxb5Q6XAS2 159 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Amhr2Q8K592 568 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Yipf1Q91VU1 306 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Prpf4Q9DAW6 521 aaKnown RBP13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Mboat4P0C7A3 435 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Cdc25aP48964 514 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Gcnt1Q09324 428 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Fam193bQ3U2K0 892 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Mylk3Q3UIZ8 795 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Dzip1lQ499E4 774 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Cage1Q5IR70 849 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Ptpn14Q62130 1189 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 GlmnQ8BZM1 596 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Apol9bQ8C7I4 310 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Apol9aQ8VDU3 310 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Snf8Q9CZ28 258 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Akt1s1Q9D1F4 257 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Hsd3b7Q9EQC1 369 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Fam129cD3YZB0 591 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Zfp94E9Q6Y4 486 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Pon1P52430 355 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Ppp1r1bQ60829 194 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Kcnt1Q6ZPR4 1224 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Efl1Q8C0D5 1127 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Spire2Q8K1S6 718 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Tasp1Q8R1G1 420 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Fkbp6Q91XW8 327 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Frmd4bQ920B0 1035 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Slc5a5Q99PN0 618 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Cmtm5Q9D6G9 156 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Psmg1Q9JK23 289 aa13.56□□□□□ -0.24
Clcn3-201ENSMUST00000004430 PurbO35295 324 aaKnown RBP13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Chrna5Q2MKA5 467 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Ddx42Q810A7 929 aaKnown RBP13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 TbckQ8BM85 762 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Scfd2Q8BTY8 684 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Pdik1lQ8QZR7 341 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Rpa1Q8VEE4 623 aaKnown RBP13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Cox16Q9CR63 106 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Tpd52l2Q9CYZ2 220 aaKnown RBP13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Maged2Q9ER67 616 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Eya4Q9Z191 616 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Wdr72D3YYM4 1114 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Smg5Q6ZPY2 1017 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Cyfip1Q7TMB8 1253 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Q8BGD0 127 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Morc4Q8BMD7 928 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Arfip2Q8K221 341 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Ears2Q9CXJ1 523 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Slc5a4aQ9ET37 656 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Pde8aO88502 823 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 P01734 135 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Gnl1P36916 607 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Map3k7clP58500 142 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Klrb1Q0ZUP1 214 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Muc3aQ3U5A2 218 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Zdhhc14Q8BQQ1 489 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Dnm1lQ8K1M6 742 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 HscbQ8K3A0 234 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Sec63Q8VHE0 760 aaKnown RBP13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Ttc1Q91Z38 292 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Ubxn6Q99PL6 442 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Plod1Q9R0E2 728 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Scgb2b12S4R2L0 112 aa13.55□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Znf609Q8BZ47 1413 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Zfp212G3X8R7 492 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 CflarO35732 481 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Kcnn2P58390 839 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Crnkl1P63154 690 aaKnown RBP13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Dync1li2Q6PDL0 492 aaKnown RBP13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Lca5Q80ST9 704 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Sh3tc2Q80VA5 1289 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Ppp1r16bQ8VHQ3 568 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Ankrd31A0A140LI88 1765 aa13.54□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms