RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Atp9aO70228 1047 aa17.61■□□□□ 0.41
Shh-201ENSMUST00000002708 Msh2P43247 935 aaKnown RBP17.61■□□□□ 0.41
Shh-201ENSMUST00000002708 GabpaQ00422 454 aa17.61■□□□□ 0.41
Shh-201ENSMUST00000002708 Cyp11b1Q3TG86 501 aa17.61■□□□□ 0.41
Shh-201ENSMUST00000002708 Slc7a6osQ7TPE5 306 aa17.61■□□□□ 0.41
Shh-201ENSMUST00000002708 Q8BGN9 141 aa17.61■□□□□ 0.41
Shh-201ENSMUST00000002708 Llcfc1Q9D9P8 108 aa17.61■□□□□ 0.41
Shh-201ENSMUST00000002708 Ly6iQ9WU67 134 aa17.61■□□□□ 0.41
Shh-201ENSMUST00000002708 Rasgrp1Q9Z1S3 795 aa17.61■□□□□ 0.41
Shh-201ENSMUST00000002708 Mdm4O35618 489 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 4930502E18RikQ14BQ3 236 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Miga1Q4QQM5 600 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Ctc1Q5SUQ9 1212 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Styk1Q6J9G1 429 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Daam2Q80U19 1115 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Ints8Q80V86 995 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Nop53Q8BK35 484 aaKnown RBP17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Efl1Q8C0D5 1127 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Shtn1Q8K2Q9 631 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Sapcd2Q9D818 391 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 PycardQ9EPB4 193 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Fem1bQ9Z2G0 627 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Gm4297D3YWB7 211 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Pik3r1P26450 724 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 LipeP54310 759 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Erbb2P70424 1256 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Gspt2Q149F3 632 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Epc2Q8C0I4 808 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Lin9Q8C735 542 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Pls3Q99K51 630 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Grk1Q9WVL4 564 aa17.6■□□□□ 0.41
Shh-201ENSMUST00000002708 Ppp1r9aH3BJD6 1292 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Casp8O89110 480 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Rps6P62754 249 aaKnown RBP17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Ugt1a2P70691 533 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Rufy4Q3TYX8 563 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 4933427I04RikQ3V053 235 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 E2f8Q58FA4 860 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Xpnpep1Q6P1B1 623 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Znf618Q80YY7 953 aaKnown RBP17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Snapc2Q91XA5 359 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Tom1l1Q923U0 474 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Tdrd12Q9CWU0 1215 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Gtf2ird1Q9JI57 1104 aaKnown RBP17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Rnf103Q9R1W3 683 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Flot1O08917 428 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Pex5O09012 639 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Map2k1P31938 393 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Zbtb17Q60821 794 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Gtf2h1Q9DBA9 547 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Cpb2Q9JHH6 422 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Krt17Q9QWL7 433 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Lamb2Q61292 1799 aa17.59■□□□□ 0.41
Shh-201ENSMUST00000002708 Mageb2A2AHM0 380 aa17.58■□□□□ 0.41
Shh-201ENSMUST00000002708 Ptprn2P80560 1001 aa17.58■□□□□ 0.41
Shh-201ENSMUST00000002708 Zfp953Q3UPV7 304 aa17.58■□□□□ 0.41
Shh-201ENSMUST00000002708 Nlrp14Q6B966 993 aa17.58■□□□□ 0.41
Shh-201ENSMUST00000002708 Iffo1Q8BXL9 562 aa17.58■□□□□ 0.41
Shh-201ENSMUST00000002708 AgpsQ8C0I1 645 aa17.58■□□□□ 0.41
Shh-201ENSMUST00000002708 Kdm4bQ91VY5 1086 aa17.58■□□□□ 0.41
Shh-201ENSMUST00000002708 Fkbp6Q91XW8 327 aa17.58■□□□□ 0.41
Shh-201ENSMUST00000002708 Cyp2s1Q9DBX6 501 aa17.58■□□□□ 0.41
Shh-201ENSMUST00000002708 Nudt12Q9DCN1 462 aa17.58■□□□□ 0.41
Shh-201ENSMUST00000002708 Ggt5Q9Z2A9 573 aa17.58■□□□□ 0.41
Shh-201ENSMUST00000002708 Znf804aA2AKY4 1200 aa17.58■□□□□ 0.4
Shh-201ENSMUST00000002708 Ttll6A4Q9E8 822 aa17.58■□□□□ 0.4
Shh-201ENSMUST00000002708 Ccdc85cE9Q6B2 420 aa17.58■□□□□ 0.4
Shh-201ENSMUST00000002708 Rnf216P58283 853 aa17.58■□□□□ 0.4
Shh-201ENSMUST00000002708 Abi2P62484 446 aa17.58■□□□□ 0.4
Shh-201ENSMUST00000002708 Gm10488Q4KL05 212 aa17.58■□□□□ 0.4
Shh-201ENSMUST00000002708 Tmem117Q8BH18 514 aa17.58■□□□□ 0.4
Shh-201ENSMUST00000002708 Ubap1Q8BH48 502 aa17.58■□□□□ 0.4
Shh-201ENSMUST00000002708 Klhl36Q8R124 613 aa17.58■□□□□ 0.4
Shh-201ENSMUST00000002708 Thoc1Q8R3N6 657 aaKnown RBP17.58■□□□□ 0.4
Shh-201ENSMUST00000002708 Asb11Q9CQ31 323 aa17.58■□□□□ 0.4
Shh-201ENSMUST00000002708 Snx1Q9WV80 522 aa17.58■□□□□ 0.4
Shh-201ENSMUST00000002708 Taf1Q80UV9 1891 aa17.58■□□□□ 0.4
Shh-201ENSMUST00000002708 Cep85lA0A1W2P884 806 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Zfp266E9Q2S7 604 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Slc3a2P10852 526 aaKnown RBP17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Oprl1P35377 367 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Sox10Q04888 466 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Rnf113a2Q14B01 337 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 SpopQ6ZWS8 374 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Dusp4Q8BFV3 398 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Tor4aQ8BH02 426 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Slc26a6Q8CIW6 758 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Ints9Q8K114 658 aaKnown RBP17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Trpm8Q8R4D5 1104 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Gm28360A0A087WR25 190 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Cfap221A9Q751 836 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Klrk1O54709 232 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Pde4aO89084 844 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Eno1P17182 434 aaKnown RBP17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 RxrbP28704 520 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Serpinb1cQ5SV42 375 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Wnk4Q80UE6 1222 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 L3mbtl3Q8BLB7 883 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Mageb18Q8BQR7 327 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Tdrd1Q99MV1 1172 aa17.57■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 63.9 ms