RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W GLN3P18494 730 aa5.73□□□□□ -1.49
CIT3YPR001W CHA1P25379 360 aaKnown RBP5.73□□□□□ -1.49
CIT3YPR001W TRR1P29509 319 aaKnown RBP5.73□□□□□ -1.49
CIT3YPR001W YOX1P34161 385 aa5.73□□□□□ -1.49
CIT3YPR001W DBP7P36120 742 aaKnown RBP5.73□□□□□ -1.49
CIT3YPR001W MTC6P38849 526 aa5.73□□□□□ -1.49
CIT3YPR001W YPS5P53057 165 aa5.73□□□□□ -1.49
CIT3YPR001W GND2P53319 492 aa5.73□□□□□ -1.49
CIT3YPR001W YMR166CQ03829 368 aa5.73□□□□□ -1.49
CIT3YPR001W YPR098CQ06089 161 aa5.73□□□□□ -1.49
CIT3YPR001W FRE8Q12209 686 aa5.73□□□□□ -1.49
CIT3YPR001W TFC7Q12415 435 aa5.73□□□□□ -1.49
CIT3YPR001W SIR4P11978 1358 aa5.72□□□□□ -1.49
CIT3YPR001W BMH1P29311 267 aaKnown RBP5.72□□□□□ -1.49
CIT3YPR001W TPS2P31688 896 aaKnown RBP5.72□□□□□ -1.49
CIT3YPR001W SRP102P36057 244 aaPredicted RBP5.72□□□□□ -1.49
CIT3YPR001W YKL075CP36083 450 aa5.72□□□□□ -1.49
CIT3YPR001W DRE2P36152 348 aa5.72□□□□□ -1.49
CIT3YPR001W YBR096WP38256 230 aa5.72□□□□□ -1.49
CIT3YPR001W TPN1P53099 579 aa5.72□□□□□ -1.49
CIT3YPR001W IBD2P53892 351 aa5.72□□□□□ -1.49
CIT3YPR001W PIR3Q03180 325 aa5.72□□□□□ -1.49
CIT3YPR001W DPP1Q05521 289 aa5.72□□□□□ -1.49
CIT3YPR001W MRX9Q07349 420 aaKnown RBP5.72□□□□□ -1.49
CIT3YPR001W IRC10Q08118 586 aa5.72□□□□□ -1.49
CIT3YPR001W YPL119C-AQ3E751 87 aa5.72□□□□□ -1.49
CIT3YPR001W PIS1P06197 220 aaKnown RBP5.71□□□□□ -1.49
CIT3YPR001W BCY1P07278 416 aaKnown RBP5.71□□□□□ -1.49
CIT3YPR001W TUB1P09733 447 aaKnown RBP5.71□□□□□ -1.49
CIT3YPR001W YCR022CP25620 114 aa5.71□□□□□ -1.49
CIT3YPR001W AGA1P32323 725 aa5.71□□□□□ -1.49
CIT3YPR001W KTI12P34253 313 aaKnown RBP5.71□□□□□ -1.49
CIT3YPR001W CAF4P36130 643 aa5.71□□□□□ -1.49
CIT3YPR001W YBR137WP38276 179 aa5.71□□□□□ -1.49
CIT3YPR001W SEO1P39709 593 aa5.71□□□□□ -1.49
CIT3YPR001W IRC18P47056 224 aa5.71□□□□□ -1.49
CIT3YPR001W MMS2P53152 137 aa5.71□□□□□ -1.49
CIT3YPR001W YLR152CP54072 576 aa5.71□□□□□ -1.49
CIT3YPR001W RHO3Q00245 231 aaKnown RBP5.71□□□□□ -1.49
CIT3YPR001W DIG1Q03063 452 aaKnown RBP5.71□□□□□ -1.49
CIT3YPR001W SNO1Q03144 224 aa5.71□□□□□ -1.49
CIT3YPR001W YMR010WQ03687 405 aa5.71□□□□□ -1.49
CIT3YPR001W TAF9Q05027 157 aa5.71□□□□□ -1.49
CIT3YPR001W PEX30Q06169 523 aa5.71□□□□□ -1.49
CIT3YPR001W YLR446WQ06204 433 aa5.71□□□□□ -1.49
CIT3YPR001W SPT3P06844 337 aa5.71□□□□□ -1.5
CIT3YPR001W YCR087C-AP37263 153 aa5.71□□□□□ -1.5
CIT3YPR001W IKS1P47042 667 aa5.71□□□□□ -1.5
CIT3YPR001W TRM9P49957 279 aa5.71□□□□□ -1.5
CIT3YPR001W SUN4P53616 420 aa5.71□□□□□ -1.5
CIT3YPR001W IDP3P53982 420 aaKnown RBP5.71□□□□□ -1.5
CIT3YPR001W DTD1Q07648 150 aaKnown RBP5.71□□□□□ -1.5
CIT3YPR001W YNG1Q08465 219 aa5.71□□□□□ -1.5
CIT3YPR001W SKI3P17883 1432 aaKnown RBP5.7□□□□□ -1.5
CIT3YPR001W RPL23AP0CX41 137 aaKnown RBP5.7□□□□□ -1.5
CIT3YPR001W RPL23BP0CX42 137 aaKnown RBP5.7□□□□□ -1.5
CIT3YPR001W ZWF1P11412 505 aaKnown RBP5.7□□□□□ -1.5
CIT3YPR001W PMT2P31382 759 aa5.7□□□□□ -1.5
CIT3YPR001W GRE3P38715 327 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
CIT3YPR001W SOK1P40317 901 aa5.7□□□□□ -1.5
CIT3YPR001W AZF1P41696 914 aa5.7□□□□□ -1.5
CIT3YPR001W FYV6P53913 173 aa5.7□□□□□ -1.5
CIT3YPR001W SWS2P53937 143 aa5.7□□□□□ -1.5
CIT3YPR001W PRP38Q00723 242 aaPredicted RBP5.7□□□□□ -1.5
CIT3YPR001W RSA1Q08932 381 aa5.7□□□□□ -1.5
CIT3YPR001W YPL150WQ12152 901 aa5.7□□□□□ -1.5
CIT3YPR001W EAF3Q12432 401 aa5.7□□□□□ -1.5
CIT3YPR001W HTZ1Q12692 134 aaKnown RBP5.7□□□□□ -1.5
CIT3YPR001W CSR2Q12734 1121 aa5.7□□□□□ -1.5
CIT3YPR001W HEM4P06174 275 aa5.69□□□□□ -1.5
CIT3YPR001W PET494P07390 489 aaPredicted RBP5.69□□□□□ -1.5
CIT3YPR001W GCY1P14065 312 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
CIT3YPR001W IFM1P25038 676 aa5.69□□□□□ -1.5
CIT3YPR001W RNQ1P25367 405 aa5.69□□□□□ -1.5
CIT3YPR001W ALK2P32789 676 aaPredicted RBP5.69□□□□□ -1.5
CIT3YPR001W SCO2P38072 301 aa5.69□□□□□ -1.5
CIT3YPR001W WSC4P38739 605 aa5.69□□□□□ -1.5
CIT3YPR001W KRE29P40026 464 aa5.69□□□□□ -1.5
CIT3YPR001W BRR6P53062 197 aa5.69□□□□□ -1.5
CIT3YPR001W GTR2P53290 341 aa5.69□□□□□ -1.5
CIT3YPR001W GOR1P53839 350 aa5.69□□□□□ -1.5
CIT3YPR001W YDR415CQ04033 374 aaPredicted RBP5.69□□□□□ -1.5
CIT3YPR001W GMC1Q04399 608 aa5.69□□□□□ -1.5
CIT3YPR001W YGK3Q12222 375 aaPredicted RBP5.69□□□□□ -1.5
CIT3YPR001W YLR126CQ12288 251 aa5.69□□□□□ -1.5
CIT3YPR001W FOL3Q12676 427 aaPredicted RBP5.69□□□□□ -1.5
CIT3YPR001W YAL064W-BO13512 126 aa5.68□□□□□ -1.5
CIT3YPR001W PPH21P23594 369 aa5.68□□□□□ -1.5
CIT3YPR001W COG3P40094 801 aa5.68□□□□□ -1.5
CIT3YPR001W ICE2P40499 491 aa5.68□□□□□ -1.5
CIT3YPR001W LCB3P47013 409 aa5.68□□□□□ -1.5
CIT3YPR001W YJL016WP47072 561 aa5.68□□□□□ -1.5
CIT3YPR001W NBP35P52920 328 aa5.68□□□□□ -1.5
CIT3YPR001W SUR7P54003 302 aa5.68□□□□□ -1.5
CIT3YPR001W YDC1Q02896 317 aa5.68□□□□□ -1.5
CIT3YPR001W MMT2Q08970 484 aa5.68□□□□□ -1.5
CIT3YPR001W NUF2P33895 451 aa5.67□□□□□ -1.5
CIT3YPR001W MIX23P38162 196 aa5.67□□□□□ -1.5
CIT3YPR001W OST1P41543 476 aaKnown RBP5.67□□□□□ -1.5
CIT3YPR001W SNO3P43544 222 aa5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms