RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W MSS116P15424 664 aaKnown RBP2.52□□□□□ -2.01
VAM3YOR106W SWD2P36104 329 aaPredicted RBP2.52□□□□□ -2.01
VAM3YOR106W PIR5P46999 287 aa2.52□□□□□ -2.01
VAM3YOR106W YDR286CQ05530 114 aa2.52□□□□□ -2.01
VAM3YOR106W CAR2P07991 424 aaKnown RBP2.51□□□□□ -2.01
VAM3YOR106W CLB6P32943 380 aa2.51□□□□□ -2.01
VAM3YOR106W RPE1P46969 238 aa2.51□□□□□ -2.01
VAM3YOR106W YJR141WP47172 347 aaPredicted RBP2.51□□□□□ -2.01
VAM3YOR106W YMR111CQ04461 462 aaPredicted RBP2.51□□□□□ -2.01
VAM3YOR106W PLB3Q08108 686 aa2.51□□□□□ -2.01
VAM3YOR106W ATG5Q12380 294 aa2.51□□□□□ -2.01
VAM3YOR106W RPL5P26321 297 aaKnown RBP2.5□□□□□ -2.01
VAM3YOR106W AEP1P32493 518 aa2.5□□□□□ -2.01
VAM3YOR106W SPL2P38839 148 aa2.5□□□□□ -2.01
VAM3YOR106W SEN34P39707 275 aa2.5□□□□□ -2.01
VAM3YOR106W AVT7P40501 490 aa2.5□□□□□ -2.01
VAM3YOR106W TPN1P53099 579 aa2.5□□□□□ -2.01
VAM3YOR106W COG7P53195 279 aa2.5□□□□□ -2.01
VAM3YOR106W VPS20Q04272 221 aa2.5□□□□□ -2.01
VAM3YOR106W TAZ1Q06510 381 aa2.5□□□□□ -2.01
VAM3YOR106W RDS3Q06835 107 aaPredicted RBP2.5□□□□□ -2.01
VAM3YOR106W PGC1Q08959 321 aa2.5□□□□□ -2.01
VAM3YOR106W TY3A-GQ12173 290 aa2.5□□□□□ -2.01
VAM3YOR106W TY3A-IQ99219 290 aa2.5□□□□□ -2.01
VAM3YOR106W PAN1P32521 1480 aa2.5□□□□□ -2.01
VAM3YOR106W GAL7P08431 366 aa2.49□□□□□ -2.01
VAM3YOR106W YKL063CP35725 167 aa2.49□□□□□ -2.01
VAM3YOR106W PHO89P38361 574 aa2.49□□□□□ -2.01
VAM3YOR106W MPP10P47083 593 aaKnown RBP2.49□□□□□ -2.01
VAM3YOR106W YPT32P51996 222 aaKnown RBP2.49□□□□□ -2.01
VAM3YOR106W YOR283WQ12040 230 aaKnown RBP2.49□□□□□ -2.01
VAM3YOR106W YPL150WQ12152 901 aa2.49□□□□□ -2.01
VAM3YOR106W SIA1Q12212 622 aa2.49□□□□□ -2.01
VAM3YOR106W VMA2P16140 517 aaKnown RBP2.48□□□□□ -2.01
VAM3YOR106W TRX1P22217 103 aaKnown RBP2.48□□□□□ -2.01
VAM3YOR106W SUR2P38992 349 aa2.48□□□□□ -2.01
VAM3YOR106W LOH1P47055 219 aa2.48□□□□□ -2.01
VAM3YOR106W RIB4P50861 169 aaPredicted RBP2.48□□□□□ -2.01
VAM3YOR106W YMR209CQ03648 457 aa2.48□□□□□ -2.01
VAM3YOR106W DPP1Q05521 289 aa2.48□□□□□ -2.01
VAM3YOR106W COT1P32798 439 aa2.47□□□□□ -2.01
VAM3YOR106W YIA6P40556 373 aa2.47□□□□□ -2.01
VAM3YOR106W VOA1P53262 265 aa2.47□□□□□ -2.01
VAM3YOR106W DBP6P53734 629 aaKnown RBP2.47□□□□□ -2.01
VAM3YOR106W YPL077CQ02831 240 aa2.47□□□□□ -2.01
VAM3YOR106W YML018CQ03730 393 aa2.47□□□□□ -2.01
VAM3YOR106W MGR3Q04472 501 aa2.47□□□□□ -2.01
VAM3YOR106W YEL009C-AA0A023PZF2 135 aa2.46□□□□□ -2.02
VAM3YOR106W RPL26AP05743 127 aaKnown RBP2.46□□□□□ -2.02
VAM3YOR106W KRE6P32486 720 aa2.46□□□□□ -2.02
VAM3YOR106W SUA5P32579 426 aa2.46□□□□□ -2.02
VAM3YOR106W CAT2P32796 670 aaKnown RBP2.46□□□□□ -2.02
VAM3YOR106W RPS0AP32905 252 aaKnown RBP2.46□□□□□ -2.02
VAM3YOR106W COY1P34237 679 aa2.46□□□□□ -2.02
VAM3YOR106W RPC37P36121 282 aa2.46□□□□□ -2.02
VAM3YOR106W OST3P48439 350 aa2.46□□□□□ -2.02
VAM3YOR106W RPL26BP53221 127 aaKnown RBP2.46□□□□□ -2.02
VAM3YOR106W MYO5Q04439 1219 aaKnown RBP2.46□□□□□ -2.02
VAM3YOR106W SUE1Q06524 206 aa2.46□□□□□ -2.02
VAM3YOR106W VPS68Q12016 184 aa2.46□□□□□ -2.02
VAM3YOR106W SAR1P20606 190 aaKnown RBP2.45□□□□□ -2.02
VAM3YOR106W ERG2P32352 222 aa2.45□□□□□ -2.02
VAM3YOR106W POP8P38208 133 aa2.45□□□□□ -2.02
VAM3YOR106W CDC40P40968 455 aaPredicted RBP2.45□□□□□ -2.02
VAM3YOR106W GRH1Q04410 372 aaKnown RBP2.45□□□□□ -2.02
VAM3YOR106W SPO77Q06134 477 aa2.45□□□□□ -2.02
VAM3YOR106W ASR1Q06834 288 aa2.45□□□□□ -2.02
VAM3YOR106W YOR114WQ12219 294 aa2.45□□□□□ -2.02
VAM3YOR106W AGC1Q12482 902 aa2.45□□□□□ -2.02
VAM3YOR106W ISD11Q6Q560 94 aa2.45□□□□□ -2.02
VAM3YOR106W TFS1P14306 219 aa2.44□□□□□ -2.02
VAM3YOR106W TDA11P38854 504 aa2.44□□□□□ -2.02
VAM3YOR106W POP2P39008 433 aa2.44□□□□□ -2.02
VAM3YOR106W SHQ1P40486 507 aaPredicted RBP2.44□□□□□ -2.02
VAM3YOR106W ABZ2Q03266 374 aa2.44□□□□□ -2.02
VAM3YOR106W CGI121Q03705 181 aaKnown RBP2.44□□□□□ -2.02
VAM3YOR106W YMR166CQ03829 368 aa2.44□□□□□ -2.02
VAM3YOR106W SPT4P32914 102 aaPredicted RBP2.43□□□□□ -2.02
VAM3YOR106W GTO1P48239 356 aa2.43□□□□□ -2.02
VAM3YOR106W NBP1P52919 319 aaPredicted RBP2.43□□□□□ -2.02
VAM3YOR106W FCF1Q05498 189 aaPredicted RBP2.43□□□□□ -2.02
VAM3YOR106W RTC5Q12108 567 aaKnown RBP2.43□□□□□ -2.02
VAM3YOR106W POM33Q12164 279 aa2.43□□□□□ -2.02
VAM3YOR106W GCD2P12754 651 aaPredicted RBP2.42□□□□□ -2.02
VAM3YOR106W KEL2P50090 882 aa2.42□□□□□ -2.02
VAM3YOR106W YMR316C-AI2HB70 103 aa2.41□□□□□ -2.02
VAM3YOR106W ATP6P00854 259 aa2.41□□□□□ -2.02
VAM3YOR106W DPM1P14020 267 aaKnown RBP2.41□□□□□ -2.02
VAM3YOR106W TPM1P17536 199 aaKnown RBP2.41□□□□□ -2.02
VAM3YOR106W BMH1P29311 267 aaKnown RBP2.41□□□□□ -2.02
VAM3YOR106W YDR089WP38966 869 aa2.41□□□□□ -2.02
VAM3YOR106W YJR146WP47174 117 aa2.41□□□□□ -2.02
VAM3YOR106W TAF9Q05027 157 aa2.41□□□□□ -2.02
VAM3YOR106W RRG8Q06109 277 aa2.41□□□□□ -2.02
VAM3YOR106W CTS2Q06350 511 aa2.41□□□□□ -2.02
VAM3YOR106W VAC14Q06708 880 aa2.41□□□□□ -2.02
VAM3YOR106W YOL019WQ08157 551 aa2.41□□□□□ -2.02
VAM3YOR106W ILV1P00927 576 aaKnown RBP2.4□□□□□ -2.03
VAM3YOR106W SCO1P23833 295 aa2.4□□□□□ -2.03
VAM3YOR106W ATG15P25641 520 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 70.5 ms