RNA–Protein interactions for RNA: YMR172W

HOT1, Transcript of Transcription factor for glycerol biosynthetic genes, yeast

Gene HOT1, Length 2,160 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOT1	YMR172W	DAL82	P21705	255 aa		4.21	□□□□□ -1.74
HOT1	YMR172W	LSB5	P25369	354 aa		4.21	□□□□□ -1.74
HOT1	YMR172W	HOG1	P32485	435 aa		4.21	□□□□□ -1.74
HOT1	YMR172W	YEF1	P32622	495 aa		4.21	□□□□□ -1.74
HOT1	YMR172W	UGX2	P32772	223 aa		4.21	□□□□□ -1.74
HOT1	YMR172W	YBR096W	P38256	230 aa		4.21	□□□□□ -1.74
HOT1	YMR172W	SNU13	P39990	126 aa	Known RBP	4.21	□□□□□ -1.74
HOT1	YMR172W	HEM14	P40012	539 aa		4.21	□□□□□ -1.74
HOT1	YMR172W	RFC4	P40339	323 aa	Known RBP	4.21	□□□□□ -1.74
HOT1	YMR172W	LRO1	P40345	661 aa		4.21	□□□□□ -1.74
HOT1	YMR172W	ATF1	P40353	525 aa		4.21	□□□□□ -1.74
HOT1	YMR172W	RRD1	P40454	393 aa	Known RBP	4.21	□□□□□ -1.74
HOT1	YMR172W	LYS12	P40495	371 aa	Known RBP	4.21	□□□□□ -1.74
HOT1	YMR172W	YJL163C	P46996	555 aa		4.21	□□□□□ -1.74
HOT1	YMR172W	YGL138C	P53122	345 aa		4.21	□□□□□ -1.74
HOT1	YMR172W	PUS6	P53294	404 aa		4.21	□□□□□ -1.74
HOT1	YMR172W	MPP6	P53725	186 aa	Predicted RBP	4.21	□□□□□ -1.74
HOT1	YMR172W	FMP41	P53889	259 aa	Known RBP	4.21	□□□□□ -1.74
HOT1	YMR172W	ELC1	Q03071	99 aa		4.21	□□□□□ -1.74
HOT1	YMR172W	YMR315W	Q04869	349 aa	Known RBP	4.21	□□□□□ -1.74
HOT1	YMR172W	YPR109W	Q06104	294 aa		4.21	□□□□□ -1.74
HOT1	YMR172W	CSI2	Q08054	341 aa		4.21	□□□□□ -1.74
HOT1	YMR172W	GRE2	Q12068	342 aa	Known RBP	4.21	□□□□□ -1.74
HOT1	YMR172W	JLP1	Q12358	412 aa		4.21	□□□□□ -1.74
HOT1	YMR172W	KCS1	Q12494	1050 aa		4.21	□□□□□ -1.74
HOT1	YMR172W	FOL3	Q12676	427 aa	Predicted RBP	4.21	□□□□□ -1.74
HOT1	YMR172W	PHO2	P07269	559 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	MSK1	P32048	576 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	LSM2	P38203	95 aa	Known RBP	4.2	□□□□□ -1.74
HOT1	YMR172W	UBS1	P38290	277 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	CUE1	P38428	203 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	MUP3	P38734	546 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	GCV3	P39726	170 aa	Predicted RBP	4.2	□□□□□ -1.74
HOT1	YMR172W	YER188W	P40103	239 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	SYS1	P41544	203 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	MOB2	P43563	287 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	SAM37	P50110	327 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	BOR1	P53838	576 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	MRPL19	P53875	158 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	ACT1	P60010	375 aa	Known RBP	4.2	□□□□□ -1.74
HOT1	YMR172W	YVH1	Q02256	364 aa	Known RBP	4.2	□□□□□ -1.74
HOT1	YMR172W	RSM10	Q03201	203 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	YML018C	Q03730	393 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	DOT1	Q04089	582 aa	Known RBP	4.2	□□□□□ -1.74
HOT1	YMR172W	YDR222W	Q04925	415 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	UPC2	Q12151	913 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	RKI1	Q12189	258 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	PST1	Q12355	444 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	AIM45	Q12480	344 aa	Known RBP	4.2	□□□□□ -1.74
HOT1	YMR172W	HRP1	Q99383	534 aa	Known RBP	4.2	□□□□□ -1.74
HOT1	YMR172W	FKS3	Q04952	1785 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	CYC7	P00045	113 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	GDH1	P07262	454 aa	Known RBP	4.2	□□□□□ -1.74
HOT1	YMR172W	RPL27A	P0C2H6	136 aa	Known RBP	4.2	□□□□□ -1.74
HOT1	YMR172W	RPL27B	P0C2H7	136 aa	Known RBP	4.2	□□□□□ -1.74
HOT1	YMR172W	RPS4A	P0CX35	261 aa	Known RBP	4.2	□□□□□ -1.74
HOT1	YMR172W	RPS4B	P0CX36	261 aa	Known RBP	4.2	□□□□□ -1.74
HOT1	YMR172W	NHP6B	P11633	99 aa	Known RBP	4.2	□□□□□ -1.74
HOT1	YMR172W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
HOT1	YMR172W	ARP2	P32381	391 aa	Known RBP	4.2	□□□□□ -1.74
HOT1	YMR172W	MRP20	P32387	263 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	SRB5	P32585	307 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	CLB6	P32943	380 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	TIP20	P33891	701 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	TAE1	P38340	232 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	SRP68	P38687	599 aa	Known RBP	4.2	□□□□□ -1.74
HOT1	YMR172W	NPP2	P39997	493 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	MGS1	P40151	587 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	YJL132W	P47014	750 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	OST3	P48439	350 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	SYF2	P53277	215 aa	Predicted RBP	4.2	□□□□□ -1.74
HOT1	YMR172W	YGR273C	P53329	174 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	ASI3	P53983	676 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	TGL2	P54857	326 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	RHO4	Q00246	291 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	GOT1	Q03554	138 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	SDH7	Q04401	133 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	TCO89	Q08921	799 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	NUS1	Q12063	375 aa		4.2	□□□□□ -1.74
HOT1	YMR172W	TIF6	Q12522	245 aa	Known RBP	4.2	□□□□□ -1.74
HOT1	YMR172W	TIM9	O74700	87 aa		4.19	□□□□□ -1.74
HOT1	YMR172W	YFL068W	P0CX99	160 aa		4.19	□□□□□ -1.74
HOT1	YMR172W	YLL066W-A	P0CY00	160 aa		4.19	□□□□□ -1.74
HOT1	YMR172W	YLL067W-A	P0CY01	160 aa		4.19	□□□□□ -1.74
HOT1	YMR172W	SEC22	P22214	214 aa		4.19	□□□□□ -1.74
HOT1	YMR172W	HOM6	P31116	359 aa	Known RBP	4.19	□□□□□ -1.74
HOT1	YMR172W	SFC1	P33303	322 aa		4.19	□□□□□ -1.74
HOT1	YMR172W	PMU1	P36069	295 aa		4.19	□□□□□ -1.74
HOT1	YMR172W	DAD2	P36162	133 aa		4.19	□□□□□ -1.74
HOT1	YMR172W	WSC4	P38739	605 aa		4.19	□□□□□ -1.74
HOT1	YMR172W	SHO1	P40073	367 aa		4.19	□□□□□ -1.74
HOT1	YMR172W	PUG1	P40100	303 aa		4.19	□□□□□ -1.74
HOT1	YMR172W	NTA1	P40354	457 aa		4.19	□□□□□ -1.74
HOT1	YMR172W	SDT1	P53078	280 aa		4.19	□□□□□ -1.74
HOT1	YMR172W	SGF73	P53165	657 aa		4.19	□□□□□ -1.74
HOT1	YMR172W	GTR2	P53290	341 aa		4.19	□□□□□ -1.74
HOT1	YMR172W	ALG11	P53954	548 aa	Known RBP	4.19	□□□□□ -1.74
HOT1	YMR172W	RSM23	Q01163	450 aa		4.19	□□□□□ -1.74
HOT1	YMR172W	DAL4	Q04895	635 aa		4.19	□□□□□ -1.74
HOT1	YMR172W	CRF1	Q04930	467 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms