RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C YDL177CQ12257 170 aa10.09□□□□□ -0.79
SPT8YLR055C GCD1P09032 578 aaPredicted RBP10.08□□□□□ -0.8
SPT8YLR055C ERG24P32462 438 aaKnown RBP10.08□□□□□ -0.8
SPT8YLR055C ECM25P32525 599 aa10.08□□□□□ -0.8
SPT8YLR055C MTC4P38335 694 aaKnown RBP10.08□□□□□ -0.8
SPT8YLR055C YGR026WP53217 278 aa10.08□□□□□ -0.8
SPT8YLR055C YGR250CP53316 781 aaKnown RBP10.08□□□□□ -0.8
SPT8YLR055C FDH1Q08911 376 aa10.08□□□□□ -0.8
SPT8YLR055C YDL211CQ12121 372 aa10.08□□□□□ -0.8
SPT8YLR055C LEU9Q12166 604 aaKnown RBP10.08□□□□□ -0.8
SPT8YLR055C YKL033W-AQ86ZR7 236 aa10.08□□□□□ -0.8
SPT8YLR055C TDH1P00360 332 aaKnown RBP10.07□□□□□ -0.8
SPT8YLR055C HOM3P10869 527 aa10.07□□□□□ -0.8
SPT8YLR055C RPB5P20434 215 aa10.07□□□□□ -0.8
SPT8YLR055C CNE1P27825 502 aa10.07□□□□□ -0.8
SPT8YLR055C FUN19P28003 413 aaPredicted RBP10.07□□□□□ -0.8
SPT8YLR055C ERG1P32476 496 aaKnown RBP10.07□□□□□ -0.8
SPT8YLR055C DOA1P36037 715 aa10.07□□□□□ -0.8
SPT8YLR055C MAL32P38158 584 aa10.07□□□□□ -0.8
SPT8YLR055C OCA5P38738 679 aa10.07□□□□□ -0.8
SPT8YLR055C HRB1P38922 454 aaKnown RBP RIP-Chip data10.07□□□□□ -0.8not detected
SPT8YLR055C PHB2P50085 310 aa10.07□□□□□ -0.8
SPT8YLR055C MAL12P53341 584 aa10.07□□□□□ -0.8
SPT8YLR055C ODC1Q03028 310 aa10.07□□□□□ -0.8
SPT8YLR055C DIC1Q06143 298 aa10.07□□□□□ -0.8
SPT8YLR055C YOR378WQ08902 515 aa10.07□□□□□ -0.8
SPT8YLR055C PCC1Q3E833 88 aa10.07□□□□□ -0.8
SPT8YLR055C VAM7P32912 316 aa10.07□□□□□ -0.8
SPT8YLR055C MKS1P34072 584 aa10.07□□□□□ -0.8
SPT8YLR055C PEX32P38292 413 aa10.07□□□□□ -0.8
SPT8YLR055C MCM22P47167 239 aa10.07□□□□□ -0.8
SPT8YLR055C SAM37P50110 327 aa10.07□□□□□ -0.8
SPT8YLR055C IRC13Q08630 104 aa10.07□□□□□ -0.8
SPT8YLR055C RTC5Q12108 567 aaKnown RBP10.07□□□□□ -0.8
SPT8YLR055C GPI12P23797 304 aa10.06□□□□□ -0.8
SPT8YLR055C GCV3P39726 170 aaPredicted RBP10.06□□□□□ -0.8
SPT8YLR055C NEO1P40527 1151 aa10.06□□□□□ -0.8
SPT8YLR055C YJR111CP47148 283 aaKnown RBP10.06□□□□□ -0.8
SPT8YLR055C PHO23P50947 330 aa10.06□□□□□ -0.8
SPT8YLR055C HHO1P53551 258 aa10.06□□□□□ -0.8
SPT8YLR055C ARG5,6Q01217 863 aa10.06□□□□□ -0.8
SPT8YLR055C LAP3Q01532 483 aaKnown RBP RIP-Chip data10.06□□□□□ -0.8not detected
SPT8YLR055C SEC13Q04491 297 aaKnown RBP10.06□□□□□ -0.8
SPT8YLR055C YPR127WQ06494 345 aa10.06□□□□□ -0.8
SPT8YLR055C TAZ1Q06510 381 aa10.06□□□□□ -0.8
SPT8YLR055C BSC6Q08280 497 aa10.06□□□□□ -0.8
SPT8YLR055C PRM4Q12498 284 aa10.06□□□□□ -0.8
SPT8YLR055C TY1A-DR4O74302 440 aa10.05□□□□□ -0.8
SPT8YLR055C PHO2P07269 559 aa10.05□□□□□ -0.8
SPT8YLR055C TY1A-AP0CX57 440 aa10.05□□□□□ -0.8
SPT8YLR055C TY1A-PR1P0CX58 440 aa10.05□□□□□ -0.8
SPT8YLR055C TY1A-ORP0CX59 440 aa10.05□□□□□ -0.8
SPT8YLR055C TY1A-PR2P0CX60 440 aa10.05□□□□□ -0.8
SPT8YLR055C TY1A-DR5P0CX65 440 aa10.05□□□□□ -0.8
SPT8YLR055C TY1A-ER2P0CX66 440 aa10.05□□□□□ -0.8
SPT8YLR055C TY1A-GR3P0CX67 440 aa10.05□□□□□ -0.8
SPT8YLR055C TY1A-LR1P0CX68 440 aa10.05□□□□□ -0.8
SPT8YLR055C TY1A-MR2P0CX69 440 aa10.05□□□□□ -0.8
SPT8YLR055C LDS1P31379 325 aa10.05□□□□□ -0.8
SPT8YLR055C TY1A-JR2P47099 440 aa10.05□□□□□ -0.8
SPT8YLR055C YGR042WP53227 271 aa10.05□□□□□ -0.8
SPT8YLR055C TY1A-DR1Q03856 440 aa10.05□□□□□ -0.8
SPT8YLR055C TY1A-ML1Q04706 440 aaKnown RBP10.05□□□□□ -0.8
SPT8YLR055C YEH1Q07804 573 aa10.05□□□□□ -0.8
SPT8YLR055C PUS9Q12069 462 aa10.05□□□□□ -0.8
SPT8YLR055C TY1A-BRQ12217 440 aa10.05□□□□□ -0.8
SPT8YLR055C TY1A-NL2Q12470 440 aa10.05□□□□□ -0.8
SPT8YLR055C TY1A-GR2Q12485 440 aa10.05□□□□□ -0.8
SPT8YLR055C SEC22P22214 214 aa10.05□□□□□ -0.8
SPT8YLR055C SLY41P22215 453 aa10.05□□□□□ -0.8
SPT8YLR055C ARO9P38840 513 aaPredicted RBP10.05□□□□□ -0.8
SPT8YLR055C MNL1P38888 796 aa10.05□□□□□ -0.8
SPT8YLR055C SFH5P47008 294 aa10.05□□□□□ -0.8
SPT8YLR055C SPR28Q04921 423 aa10.05□□□□□ -0.8
SPT8YLR055C YLR030WQ07967 263 aa10.05□□□□□ -0.8
SPT8YLR055C VMA9Q3E7B6 73 aa10.05□□□□□ -0.8
SPT8YLR055C DET1Q99288 334 aaKnown RBP10.05□□□□□ -0.8
SPT8YLR055C ISN1Q99312 450 aa10.05□□□□□ -0.8
SPT8YLR055C HFA1P32874 2273 aa10.04□□□□□ -0.8
SPT8YLR055C SRB5P32585 307 aa10.04□□□□□ -0.8
SPT8YLR055C ISR1Q06098 443 aaKnown RBP10.04□□□□□ -0.8
SPT8YLR055C GRC3Q07845 632 aa10.04□□□□□ -0.8
SPT8YLR055C YOR365CQ08844 703 aa10.04□□□□□ -0.8
SPT8YLR055C GAL4P04386 881 aa10.03□□□□□ -0.8
SPT8YLR055C NPR1P22211 790 aa10.03□□□□□ -0.8
SPT8YLR055C FLO10P36170 1169 aa10.03□□□□□ -0.8
SPT8YLR055C MRPL16P38064 232 aa10.03□□□□□ -0.8
SPT8YLR055C YIL024CP40543 189 aa10.03□□□□□ -0.8
SPT8YLR055C LYS5P50113 272 aa10.03□□□□□ -0.8
SPT8YLR055C CGR1P53188 120 aa10.03□□□□□ -0.8
SPT8YLR055C RSM27P53305 110 aa10.03□□□□□ -0.8
SPT8YLR055C NRK1P53915 240 aa10.03□□□□□ -0.8
SPT8YLR055C SNT309Q06091 175 aaPredicted RBP10.03□□□□□ -0.8
SPT8YLR055C XYL2Q07993 356 aa10.03□□□□□ -0.8
SPT8YLR055C RRI1Q12468 440 aa10.03□□□□□ -0.8
SPT8YLR055C YJR112W-AQ3E743 109 aa10.03□□□□□ -0.8
SPT8YLR055C BRR2P32639 2163 aaKnown RBP10.03□□□□□ -0.8
SPT8YLR055C TDH2P00358 332 aaKnown RBP10.03□□□□□ -0.8
SPT8YLR055C ERG4P25340 473 aa10.03□□□□□ -0.8
SPT8YLR055C MGR1P25573 417 aa10.03□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 111.5 ms