RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C RPP0P05317 312 aaKnown RBP1.22□□□□□ -2.21
VPS55YJR044C CYC3P06182 269 aa1.22□□□□□ -2.21
VPS55YJR044C STE7P06784 515 aa1.22□□□□□ -2.21
VPS55YJR044C RPL27AP0C2H6 136 aaKnown RBP1.22□□□□□ -2.21
VPS55YJR044C RPL27BP0C2H7 136 aaKnown RBP1.22□□□□□ -2.21
VPS55YJR044C YBR121C-AP0C5L4 52 aa1.22□□□□□ -2.21
VPS55YJR044C POX1P13711 748 aa1.22□□□□□ -2.21
VPS55YJR044C BGL2P15703 313 aaKnown RBP1.22□□□□□ -2.21
VPS55YJR044C RPB5P20434 215 aa1.22□□□□□ -2.21
VPS55YJR044C AAT2P23542 418 aaKnown RBP1.22□□□□□ -2.21
VPS55YJR044C PCL1P24867 279 aa1.22□□□□□ -2.21
VPS55YJR044C GIT1P25346 518 aa1.22□□□□□ -2.21
VPS55YJR044C RAD51P25454 400 aa1.22□□□□□ -2.21
VPS55YJR044C POF1P25576 258 aa1.22□□□□□ -2.21
VPS55YJR044C CAM1P29547 415 aaKnown RBP1.22□□□□□ -2.21
VPS55YJR044C CDC13P32797 924 aaKnown RBP1.22□□□□□ -2.21
VPS55YJR044C MRPL6P32904 214 aa1.22□□□□□ -2.21
VPS55YJR044C PRP18P33411 251 aaPredicted RBP1.22□□□□□ -2.21
VPS55YJR044C MCH2P36032 473 aa1.22□□□□□ -2.21
VPS55YJR044C CBT1P36038 271 aaPredicted RBP1.22□□□□□ -2.21
VPS55YJR044C MRP21P38175 177 aa1.22□□□□□ -2.21
VPS55YJR044C YBR137WP38276 179 aa1.22□□□□□ -2.21
VPS55YJR044C FZO1P38297 855 aa1.22□□□□□ -2.21
VPS55YJR044C YPC1P38298 316 aa1.22□□□□□ -2.21
VPS55YJR044C PRS2P38620 318 aaKnown RBP1.22□□□□□ -2.21
VPS55YJR044C SOP4P39543 234 aaPredicted RBP1.22□□□□□ -2.21
VPS55YJR044C OXA1P39952 402 aa1.22□□□□□ -2.21
VPS55YJR044C YER034WP40022 185 aaKnown RBP1.22□□□□□ -2.21
VPS55YJR044C SLM1P40485 686 aa1.22□□□□□ -2.21
VPS55YJR044C DSN1P40568 576 aa1.22□□□□□ -2.21
VPS55YJR044C GDS1P41913 522 aa1.22□□□□□ -2.21
VPS55YJR044C YRB1P41920 201 aaKnown RBP1.22□□□□□ -2.21
VPS55YJR044C CIN2P46670 268 aa1.22□□□□□ -2.21
VPS55YJR044C YAR1P46683 200 aa1.22□□□□□ -2.21
VPS55YJR044C YJR085CP47131 105 aaKnown RBP1.22□□□□□ -2.21
VPS55YJR044C BIO3P50277 480 aa1.22□□□□□ -2.21
VPS55YJR044C NBP1P52919 319 aaPredicted RBP1.22□□□□□ -2.21
VPS55YJR044C CDH1P53197 566 aa1.22□□□□□ -2.21
VPS55YJR044C CRH1P53301 507 aa1.22□□□□□ -2.21
VPS55YJR044C MTM1P53320 366 aa1.22□□□□□ -2.21
VPS55YJR044C MNT4P53745 580 aa1.22□□□□□ -2.21
VPS55YJR044C CUS2P53830 285 aaPredicted RBP1.22□□□□□ -2.21
VPS55YJR044C YNL095CP53932 642 aa1.22□□□□□ -2.21
VPS55YJR044C VAC7P53950 1165 aa1.22□□□□□ -2.21
VPS55YJR044C MRPS17Q03246 237 aaPredicted RBP1.22□□□□□ -2.21
VPS55YJR044C YET2Q04210 160 aa1.22□□□□□ -2.21
VPS55YJR044C VBA1Q04301 562 aa1.22□□□□□ -2.21
VPS55YJR044C YDR115WQ04598 105 aa1.22□□□□□ -2.21
VPS55YJR044C TAF9Q05027 157 aa1.22□□□□□ -2.21
VPS55YJR044C HRI1Q05905 244 aaKnown RBP1.22□□□□□ -2.21
VPS55YJR044C DCR2Q05924 578 aa1.22□□□□□ -2.21
VPS55YJR044C ARC18Q05933 178 aaKnown RBP1.22□□□□□ -2.21
VPS55YJR044C PEX30Q06169 523 aa1.22□□□□□ -2.21
VPS55YJR044C ATP16Q12165 160 aa1.22□□□□□ -2.21
VPS55YJR044C RPN6Q12377 434 aa1.22□□□□□ -2.21
VPS55YJR044C IZH2Q12442 317 aa1.22□□□□□ -2.21
VPS55YJR044C PRM4Q12498 284 aa1.22□□□□□ -2.21
VPS55YJR044C RPL21BQ12672 160 aaKnown RBP1.22□□□□□ -2.21
VPS55YJR044C YPL119C-AQ3E751 87 aa1.22□□□□□ -2.21
VPS55YJR044C BI3Q9ZZW7 517 aa1.22□□□□□ -2.21
VPS55YJR044C TCP1P12612 559 aaKnown RBP1.21□□□□□ -2.22
VPS55YJR044C YPK2P18961 677 aa1.21□□□□□ -2.22
VPS55YJR044C YMR31P19955 123 aa1.21□□□□□ -2.22
VPS55YJR044C CMK2P22517 447 aa1.21□□□□□ -2.22
VPS55YJR044C IMP1P28627 190 aa1.21□□□□□ -2.22
VPS55YJR044C QRI5P32344 111 aa1.21□□□□□ -2.22
VPS55YJR044C PDC2P32896 925 aa1.21□□□□□ -2.22
VPS55YJR044C CSE2P33308 149 aa1.21□□□□□ -2.22
VPS55YJR044C MRPL39P36533 70 aa1.21□□□□□ -2.22
VPS55YJR044C RIB1P38066 345 aa1.21□□□□□ -2.22
VPS55YJR044C HEK2P38199 381 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22 RIP-Chip
VPS55YJR044C RCK2P38623 610 aa1.21□□□□□ -2.22
VPS55YJR044C TRM5P38793 499 aa1.21□□□□□ -2.22
VPS55YJR044C SEN34P39707 275 aa1.21□□□□□ -2.22
VPS55YJR044C KRE29P40026 464 aa1.21□□□□□ -2.22
VPS55YJR044C YNL194CP40169 301 aa1.21□□□□□ -2.22
VPS55YJR044C PAN6P40459 309 aa1.21□□□□□ -2.22
VPS55YJR044C RAD17P48581 401 aa1.21□□□□□ -2.22
VPS55YJR044C YPT32P51996 222 aaKnown RBP1.21□□□□□ -2.22
VPS55YJR044C UBC13P52490 153 aa1.21□□□□□ -2.22
VPS55YJR044C VHT1P53241 593 aa1.21□□□□□ -2.22
VPS55YJR044C MRS2Q01926 470 aa1.21□□□□□ -2.22
VPS55YJR044C YPR098CQ06089 161 aa1.21□□□□□ -2.22
VPS55YJR044C SPO77Q06134 477 aa1.21□□□□□ -2.22
VPS55YJR044C SEC10Q06245 871 aa1.21□□□□□ -2.22
VPS55YJR044C YLR177WQ06251 628 aa1.21□□□□□ -2.22
VPS55YJR044C ATG17Q06410 417 aa1.21□□□□□ -2.22
VPS55YJR044C TAZ1Q06510 381 aa1.21□□□□□ -2.22
VPS55YJR044C YPR147CQ06522 304 aaKnown RBP1.21□□□□□ -2.22
VPS55YJR044C MCH1Q07376 486 aa1.21□□□□□ -2.22
VPS55YJR044C MMT2Q08970 484 aa1.21□□□□□ -2.22
VPS55YJR044C YPL278CQ08990 100 aa1.21□□□□□ -2.22
VPS55YJR044C TAF10Q12030 206 aa1.21□□□□□ -2.22
VPS55YJR044C YPL150WQ12152 901 aa1.21□□□□□ -2.22
VPS55YJR044C YBL111CQ3E7Y5 667 aa1.21□□□□□ -2.22
VPS55YJR044C NCB2Q92317 146 aa1.21□□□□□ -2.22
VPS55YJR044C HTB1P02293 131 aaKnown RBP1.2□□□□□ -2.22
VPS55YJR044C HTB2P02294 131 aa1.2□□□□□ -2.22
VPS55YJR044C RPS3P05750 240 aaKnown RBP1.2□□□□□ -2.22
VPS55YJR044C CDC33P07260 213 aaKnown RBP1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms