RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W TNA1P53322 534 aa4.2□□□□□ -1.74
VPS29YHR012W ASI1P54074 624 aa4.2□□□□□ -1.74
VPS29YHR012W PRM15Q03262 622 aa4.2□□□□□ -1.74
VPS29YHR012W ACL4Q03771 387 aa4.2□□□□□ -1.74
VPS29YHR012W YDR102CQ03864 110 aa4.2□□□□□ -1.74
VPS29YHR012W SPC19Q03954 165 aa4.2□□□□□ -1.74
VPS29YHR012W BNA7Q04066 261 aa4.2□□□□□ -1.74
VPS29YHR012W IPK1Q06667 281 aa4.2□□□□□ -1.74
VPS29YHR012W HRT1Q08273 121 aa4.2□□□□□ -1.74
VPS29YHR012W ACF2Q12168 779 aa4.2□□□□□ -1.74
VPS29YHR012W RTR2Q12378 196 aa4.2□□□□□ -1.74
VPS29YHR012W YDL007C-AQ2V2Q0 85 aa4.2□□□□□ -1.74
VPS29YHR012W YOL159C-AQ3E769 90 aa4.2□□□□□ -1.74
VPS29YHR012W SCEIP03882 235 aa4.19□□□□□ -1.74
VPS29YHR012W RPL24AP04449 155 aaKnown RBP4.19□□□□□ -1.74
VPS29YHR012W SNF6P18888 332 aa4.19□□□□□ -1.74
VPS29YHR012W APA2P22108 325 aa4.19□□□□□ -1.74
VPS29YHR012W STE50P25344 346 aa4.19□□□□□ -1.74
VPS29YHR012W NTG1P31378 399 aa4.19□□□□□ -1.74
VPS29YHR012W YKL077WP36081 392 aa4.19□□□□□ -1.74
VPS29YHR012W SIC1P38634 284 aa4.19□□□□□ -1.74
VPS29YHR012W CTF8P38877 133 aa4.19□□□□□ -1.74
VPS29YHR012W SED1Q01589 338 aa4.19□□□□□ -1.74
VPS29YHR012W DIG2Q03373 323 aaKnown RBP4.19□□□□□ -1.74
VPS29YHR012W YDR391CQ04170 232 aa4.19□□□□□ -1.74
VPS29YHR012W NNT1Q05874 261 aa4.19□□□□□ -1.74
VPS29YHR012W MLC2Q06580 163 aa4.19□□□□□ -1.74
VPS29YHR012W YPR196WQ06595 470 aa4.19□□□□□ -1.74
VPS29YHR012W SIA1Q12212 622 aa4.19□□□□□ -1.74
VPS29YHR012W RTN2Q12443 393 aa4.19□□□□□ -1.74
VPS29YHR012W TIM9O74700 87 aa4.18□□□□□ -1.74
VPS29YHR012W MET3P08536 511 aa4.18□□□□□ -1.74
VPS29YHR012W NFT1P0CE68 1218 aa4.18□□□□□ -1.74
VPS29YHR012W YML003WP0CF16 290 aa4.18□□□□□ -1.74
VPS29YHR012W BUD5P25300 642 aaPredicted RBP4.18□□□□□ -1.74
VPS29YHR012W APL3P38065 1025 aa4.18□□□□□ -1.74
VPS29YHR012W YBR138CP38277 524 aa4.18□□□□□ -1.74
VPS29YHR012W SWD1P39706 426 aa4.18□□□□□ -1.74
VPS29YHR012W BUR6P40096 142 aa4.18□□□□□ -1.74
VPS29YHR012W MAM33P40513 266 aa4.18□□□□□ -1.74
VPS29YHR012W DIM1P41819 318 aaKnown RBP4.18□□□□□ -1.74
VPS29YHR012W PFS2P42841 465 aaKnown RBP4.18□□□□□ -1.74
VPS29YHR012W FAR7P43592 221 aa4.18□□□□□ -1.74
VPS29YHR012W RET2P43621 546 aa4.18□□□□□ -1.74
VPS29YHR012W SSY5P47002 699 aa4.18□□□□□ -1.74
VPS29YHR012W RMD9P53140 646 aaKnown RBP4.18□□□□□ -1.74
VPS29YHR012W CIK1Q01649 594 aa4.18□□□□□ -1.74
VPS29YHR012W YPL077CQ02831 240 aa4.18□□□□□ -1.74
VPS29YHR012W ABZ2Q03266 374 aa4.18□□□□□ -1.74
VPS29YHR012W MRPL51Q06090 140 aaPredicted RBP4.18□□□□□ -1.74
VPS29YHR012W YDL114WQ07530 308 aa4.18□□□□□ -1.74
VPS29YHR012W UIP4Q08926 304 aa4.18□□□□□ -1.74
VPS29YHR012W SPC3Q12133 184 aa4.18□□□□□ -1.74
VPS29YHR012W MCT1Q12283 360 aa4.18□□□□□ -1.74
VPS29YHR012W RDL1Q12305 139 aaKnown RBP4.18□□□□□ -1.74
VPS29YHR012W TY1A-NL1Q12391 440 aaKnown RBP4.18□□□□□ -1.74
VPS29YHR012W MSN1P22148 382 aa4.17□□□□□ -1.74
VPS29YHR012W KRR1P25586 316 aaPredicted RBP4.17□□□□□ -1.74
VPS29YHR012W VPH2P32341 215 aa4.17□□□□□ -1.74
VPS29YHR012W RPC82P32349 654 aa4.17□□□□□ -1.74
VPS29YHR012W GSH1P32477 678 aa4.17□□□□□ -1.74
VPS29YHR012W TCA17P32613 152 aa4.17□□□□□ -1.74
VPS29YHR012W YKL102CP34249 101 aa4.17□□□□□ -1.74
VPS29YHR012W SPT10P35208 640 aa4.17□□□□□ -1.74
VPS29YHR012W SPC34P36131 295 aa4.17□□□□□ -1.74
VPS29YHR012W SHM2P37291 469 aaKnown RBP4.17□□□□□ -1.74
VPS29YHR012W ARO9P38840 513 aaPredicted RBP4.17□□□□□ -1.74
VPS29YHR012W PHO90P39535 881 aa4.17□□□□□ -1.74
VPS29YHR012W SGN1P40561 250 aaKnown RBP RIP-Chip data4.17□□□□□ -1.74not detected
VPS29YHR012W MPH1P40562 993 aa4.17□□□□□ -1.74
VPS29YHR012W STB1P42845 420 aa4.17□□□□□ -1.74
VPS29YHR012W YHC3P47040 408 aa4.17□□□□□ -1.74
VPS29YHR012W LOH1P47055 219 aa4.17□□□□□ -1.74
VPS29YHR012W SMM1P53720 384 aaKnown RBP4.17□□□□□ -1.74
VPS29YHR012W RSM23Q01163 450 aa4.17□□□□□ -1.74
VPS29YHR012W SPR6Q01684 191 aa4.17□□□□□ -1.74
VPS29YHR012W GPI17Q04080 534 aa4.17□□□□□ -1.74
VPS29YHR012W MCH4Q08268 501 aa4.17□□□□□ -1.74
VPS29YHR012W SYC1Q08553 188 aaPredicted RBP4.17□□□□□ -1.74
VPS29YHR012W RRS1Q08746 203 aaKnown RBP4.17□□□□□ -1.74
VPS29YHR012W VIK1Q12045 647 aa4.17□□□□□ -1.74
VPS29YHR012W NFI1Q12216 726 aa4.17□□□□□ -1.74
VPS29YHR012W PDE2P06776 526 aa4.16□□□□□ -1.74
VPS29YHR012W NAM2P11325 894 aa4.16□□□□□ -1.74
VPS29YHR012W YAK1P14680 807 aa4.16□□□□□ -1.74
VPS29YHR012W PPA2P28239 310 aa4.16□□□□□ -1.74
VPS29YHR012W APE2P32454 952 aaKnown RBP4.16□□□□□ -1.74
VPS29YHR012W PRP19P32523 503 aaKnown RBP4.16□□□□□ -1.74
VPS29YHR012W SUR1P33300 382 aa4.16□□□□□ -1.74
VPS29YHR012W SRP102P36057 244 aaPredicted RBP4.16□□□□□ -1.74
VPS29YHR012W FAT1P38225 669 aa4.16□□□□□ -1.74
VPS29YHR012W FMP33P46998 180 aa4.16□□□□□ -1.74
VPS29YHR012W EXG2P52911 562 aa4.16□□□□□ -1.74
VPS29YHR012W YGR016WP53209 190 aa4.16□□□□□ -1.74
VPS29YHR012W RRN9P53437 365 aa4.16□□□□□ -1.74
VPS29YHR012W DUG3P53871 357 aa4.16□□□□□ -1.74
VPS29YHR012W ASA1Q06822 443 aa4.16□□□□□ -1.74
VPS29YHR012W CSI2Q08054 341 aa4.16□□□□□ -1.74
VPS29YHR012W LSO1Q3E827 93 aa4.16□□□□□ -1.74
VPS29YHR012W DSF1P0CX08 502 aa4.15□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms