RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C MDY2Q12285 212 aa1.5□□□□□ -2.17
SMB1YER029C TIM22Q12328 207 aa1.5□□□□□ -2.17
SMB1YER029C ATG5Q12380 294 aa1.5□□□□□ -2.17
SMB1YER029C AGC1Q12482 902 aa1.5□□□□□ -2.17
SMB1YER029C CAR2P07991 424 aaKnown RBP1.49□□□□□ -2.17
SMB1YER029C SNF6P18888 332 aa1.49□□□□□ -2.17
SMB1YER029C ATG15P25641 520 aa1.49□□□□□ -2.17
SMB1YER029C RPL16BP26785 198 aaKnown RBP1.49□□□□□ -2.17
SMB1YER029C CAB3P36076 571 aa1.49□□□□□ -2.17
SMB1YER029C TRM7P38238 310 aaKnown RBP1.49□□□□□ -2.17
SMB1YER029C OST3P48439 350 aa1.49□□□□□ -2.17
SMB1YER029C SWC4P53201 476 aa1.49□□□□□ -2.17
SMB1YER029C SSU72P53538 206 aaPredicted RBP1.49□□□□□ -2.17
SMB1YER029C ALG9P53868 555 aaKnown RBP1.49□□□□□ -2.17
SMB1YER029C CDD1Q06549 142 aa1.49□□□□□ -2.17
SMB1YER029C PAN1P32521 1480 aa1.49□□□□□ -2.17
SMB1YER029C GCD2P12754 651 aaPredicted RBP1.48□□□□□ -2.17
SMB1YER029C IMP1P28627 190 aa1.48□□□□□ -2.17
SMB1YER029C AEP1P32493 518 aa1.48□□□□□ -2.17
SMB1YER029C SHQ1P40486 507 aaPredicted RBP1.48□□□□□ -2.17
SMB1YER029C AVT7P40501 490 aa1.48□□□□□ -2.17
SMB1YER029C MNN5P46982 586 aa1.48□□□□□ -2.17
SMB1YER029C MIG2P53035 382 aa1.48□□□□□ -2.17
SMB1YER029C TVP15Q03860 143 aa1.48□□□□□ -2.17
SMB1YER029C FCF1Q05498 189 aaPredicted RBP1.48□□□□□ -2.17
SMB1YER029C CTS2Q06350 511 aa1.48□□□□□ -2.17
SMB1YER029C CUR1Q06469 252 aa1.48□□□□□ -2.17
SMB1YER029C YOR114WQ12219 294 aa1.48□□□□□ -2.17
SMB1YER029C IZH4Q99393 312 aa1.48□□□□□ -2.17
SMB1YER029C RPL5P26321 297 aaKnown RBP1.47□□□□□ -2.17
SMB1YER029C RPC37P36121 282 aa1.47□□□□□ -2.17
SMB1YER029C MNN9P39107 395 aaKnown RBP1.47□□□□□ -2.17
SMB1YER029C LOC1P43586 204 aaPredicted RBP1.47□□□□□ -2.17
SMB1YER029C VOA1P53262 265 aa1.47□□□□□ -2.17
SMB1YER029C MRS2Q01926 470 aa1.47□□□□□ -2.17
SMB1YER029C NNT1Q05874 261 aa1.47□□□□□ -2.17
SMB1YER029C RRG8Q06109 277 aa1.47□□□□□ -2.17
SMB1YER029C LOA1Q06508 300 aa1.47□□□□□ -2.17
SMB1YER029C VAC14Q06708 880 aa1.47□□□□□ -2.17
SMB1YER029C VPS68Q12016 184 aa1.47□□□□□ -2.17
SMB1YER029C ATP6P00854 259 aa1.46□□□□□ -2.18
SMB1YER029C RPL26AP05743 127 aaKnown RBP1.46□□□□□ -2.18
SMB1YER029C VPS1P21576 704 aaKnown RBP1.46□□□□□ -2.18
SMB1YER029C GPI12P23797 304 aa1.46□□□□□ -2.18
SMB1YER029C CLB6P32943 380 aa1.46□□□□□ -2.18
SMB1YER029C SWD2P36104 329 aaPredicted RBP1.46□□□□□ -2.18
SMB1YER029C KRE29P40026 464 aa1.46□□□□□ -2.18
SMB1YER029C COX16P47081 118 aa1.46□□□□□ -2.18
SMB1YER029C RPL26BP53221 127 aaKnown RBP1.46□□□□□ -2.18
SMB1YER029C CGI121Q03705 181 aaKnown RBP1.46□□□□□ -2.18
SMB1YER029C YML018CQ03730 393 aa1.46□□□□□ -2.18
SMB1YER029C DPP1Q05521 289 aa1.46□□□□□ -2.18
SMB1YER029C PLB3Q08108 686 aa1.46□□□□□ -2.18
SMB1YER029C YPR064WQ12492 139 aa1.46□□□□□ -2.18
SMB1YER029C SAR1P20606 190 aaKnown RBP1.45□□□□□ -2.18
SMB1YER029C OSM1P21375 501 aaKnown RBP1.45□□□□□ -2.18
SMB1YER029C YGP1P38616 354 aaKnown RBP1.45□□□□□ -2.18
SMB1YER029C SUR2P38992 349 aa1.45□□□□□ -2.18
SMB1YER029C LOH1P47055 219 aa1.45□□□□□ -2.18
SMB1YER029C YJR146WP47174 117 aa1.45□□□□□ -2.18
SMB1YER029C PNC1P53184 216 aaKnown RBP1.45□□□□□ -2.18
SMB1YER029C RSM27P53305 110 aa1.45□□□□□ -2.18
SMB1YER029C CAB4P53332 305 aa1.45□□□□□ -2.18
SMB1YER029C SWT21P53873 357 aaPredicted RBP1.45□□□□□ -2.18
SMB1YER029C YOR268CQ08734 132 aa1.45□□□□□ -2.18
SMB1YER029C DPM1P14020 267 aaKnown RBP1.44□□□□□ -2.18
SMB1YER029C SUA5P32579 426 aa1.44□□□□□ -2.18
SMB1YER029C RPC25P35718 212 aa1.44□□□□□ -2.18
SMB1YER029C SEN34P39707 275 aa1.44□□□□□ -2.18
SMB1YER029C GCD14P46959 383 aaPredicted RBP1.44□□□□□ -2.18
SMB1YER029C YPL077CQ02831 240 aa1.44□□□□□ -2.18
SMB1YER029C YLL007CQ07799 665 aa1.44□□□□□ -2.18
SMB1YER029C POM33Q12164 279 aa1.44□□□□□ -2.18
SMB1YER029C SIA1Q12212 622 aa1.44□□□□□ -2.18
SMB1YER029C RRP42Q12277 265 aaPredicted RBP1.44□□□□□ -2.18
SMB1YER029C YBL112CQ3E7Y4 105 aa1.44□□□□□ -2.18
SMB1YER029C PET494P07390 489 aaPredicted RBP1.43□□□□□ -2.18
SMB1YER029C TFS1P14306 219 aa1.43□□□□□ -2.18
SMB1YER029C TOM40P23644 387 aaKnown RBP1.43□□□□□ -2.18
SMB1YER029C CSM1P25651 190 aa1.43□□□□□ -2.18
SMB1YER029C SPT4P32914 102 aaPredicted RBP1.43□□□□□ -2.18
SMB1YER029C COY1P34237 679 aa1.43□□□□□ -2.18
SMB1YER029C MRPL40P36534 297 aa1.43□□□□□ -2.18
SMB1YER029C POP8P38208 133 aa1.43□□□□□ -2.18
SMB1YER029C SPL2P38839 148 aa1.43□□□□□ -2.18
SMB1YER029C YIA6P40556 373 aa1.43□□□□□ -2.18
SMB1YER029C GTO1P48239 356 aa1.43□□□□□ -2.18
SMB1YER029C YGL185CP53100 379 aa1.43□□□□□ -2.18
SMB1YER029C YPL039WQ03080 316 aa1.43□□□□□ -2.18
SMB1YER029C ECM18Q04623 453 aa1.43□□□□□ -2.18
SMB1YER029C ASR1Q06834 288 aa1.43□□□□□ -2.18
SMB1YER029C MRPL23Q12487 163 aaPredicted RBP1.43□□□□□ -2.18
SMB1YER029C NOT5Q12514 560 aaPredicted RBP1.43□□□□□ -2.18
SMB1YER029C FKS1P38631 1876 aaKnown RBP1.43□□□□□ -2.18
SMB1YER029C UGA1P17649 471 aa1.42□□□□□ -2.18
SMB1YER029C ERG2P32352 222 aa1.42□□□□□ -2.18
SMB1YER029C COT1P32798 439 aa1.42□□□□□ -2.18
SMB1YER029C YKL063CP35725 167 aa1.42□□□□□ -2.18
SMB1YER029C AGP3P43548 558 aa1.42□□□□□ -2.18
SMB1YER029C IBA57P47158 497 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms