RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	DCI1	Q08558	271 aa		4.6	□□□□□ -1.67
PAL1	YDR348C	PER33	Q12144	273 aa		4.6	□□□□□ -1.67
PAL1	YDR348C	YOR114W	Q12219	294 aa		4.6	□□□□□ -1.67
PAL1	YDR348C	TRM13	Q12383	476 aa		4.6	□□□□□ -1.67
PAL1	YDR348C	PCL9	Q12477	304 aa		4.6	□□□□□ -1.67
PAL1	YDR348C	RPL11B	Q3E757	174 aa	Predicted RBP	4.6	□□□□□ -1.67
PAL1	YDR348C	YPR096C	O13587	100 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	CDC28	P00546	298 aa	Known RBP	4.59	□□□□□ -1.67
PAL1	YDR348C	PHO5	P00635	467 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	PHO2	P07269	559 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	SNF5	P18480	905 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	TIP1	P27654	210 aa	Predicted RBP	4.59	□□□□□ -1.67
PAL1	YDR348C	ATS1	P31386	333 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	ORC2	P32833	620 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	CLB6	P32943	380 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	SNC2	P33328	115 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	MAC1	P35192	417 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	ELF1	P36053	145 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	MRPL28	P36527	147 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	THI2	P38141	450 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	SHE3	P38272	425 aa	Known RBP	4.59	□□□□□ -1.67
PAL1	YDR348C	RTC3	P38804	111 aa	Predicted RBP	4.59	□□□□□ -1.67
PAL1	YDR348C	PNT1	P38969	423 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	EMC5	P40540	141 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	GTS1	P40956	396 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	SNM1	P40993	198 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	IDP2	P41939	412 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	YGR012W	P53206	393 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	YNL140C	P53910	189 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	OAZ1	Q02803	292 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	DPB4	Q04603	196 aa	Known RBP	4.59	□□□□□ -1.67
PAL1	YDR348C	SWF1	Q04629	336 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	ARG7	Q04728	441 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	IRC10	Q08118	586 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	MED7	Q08278	222 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	PST1	Q12355	444 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	AGC1	Q12482	902 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	FSH3	Q99369	266 aa		4.59	□□□□□ -1.67
PAL1	YDR348C	QCR7	P00128	127 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	SOD2	P00447	233 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	KIN28	P06242	306 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	HAP2	P06774	265 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	TRP4	P07285	380 aa	Predicted RBP	4.58	□□□□□ -1.68
PAL1	YDR348C	YML003W	P0CF16	290 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	FUN14	P18411	198 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	GPI12	P23797	304 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	IDH2	P28241	369 aa	Known RBP	4.58	□□□□□ -1.68
PAL1	YDR348C	DOA4	P32571	926 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	EMC3	P36039	253 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	TCD2	P36101	447 aa	Known RBP	4.58	□□□□□ -1.68
PAL1	YDR348C	MRPL15	P36523	253 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	SRO77	P38163	1010 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	EHT1	P38295	451 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	UBA4	P38820	440 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	YIL108W	P40483	696 aa	Known RBP	4.58	□□□□□ -1.68
PAL1	YDR348C	OYE3	P41816	400 aa	Predicted RBP	4.58	□□□□□ -1.68
PAL1	YDR348C	COG7	P53195	279 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	TIM21	P53220	239 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	ART5	P53244	586 aa	Known RBP	4.58	□□□□□ -1.68
PAL1	YDR348C	YGR079W	P53249	370 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	MEP3	P53390	489 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	CUE4	Q04201	117 aa	Predicted RBP	4.58	□□□□□ -1.68
PAL1	YDR348C	YMR253C	Q04835	414 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	ATG38	Q05789	226 aa	Known RBP	4.58	□□□□□ -1.68
PAL1	YDR348C	ECM22	Q05958	814 aa	Predicted RBP	4.58	□□□□□ -1.68
PAL1	YDR348C	NOC4	Q06512	552 aa	Predicted RBP	4.58	□□□□□ -1.68
PAL1	YDR348C	BTS1	Q12051	335 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	NDJ1	Q12366	352 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	TFC7	Q12415	435 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	TMA7	Q3E764	64 aa	Known RBP	4.58	□□□□□ -1.68
PAL1	YDR348C	YPR014C	Q6B0W2	109 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	STT4	P37297	1900 aa		4.58	□□□□□ -1.68
PAL1	YDR348C	CAN1	P04817	590 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	ADK1	P07170	222 aa	Known RBP	4.57	□□□□□ -1.68
PAL1	YDR348C	UBI4	P0CG63	381 aa	Known RBP	4.57	□□□□□ -1.68
PAL1	YDR348C	RPL40A	P0CH08	128 aa	Known RBP	4.57	□□□□□ -1.68
PAL1	YDR348C	RPL40B	P0CH09	128 aa	Known RBP	4.57	□□□□□ -1.68
PAL1	YDR348C	SEC12	P11655	471 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	EPT1	P22140	391 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	YMC1	P32331	307 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	PAU2	P32612	120 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	TIP20	P33891	701 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	SEF1	P34228	1148 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	TSA1	P34760	196 aa	Known RBP	4.57	□□□□□ -1.68
PAL1	YDR348C	DOA1	P36037	715 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	APE3	P37302	537 aa	Known RBP	4.57	□□□□□ -1.68
PAL1	YDR348C	YHR177W	P38867	453 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	PEX7	P39108	375 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	UIP3	P39547	235 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	YER010C	P40011	234 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	UBX6	P47049	396 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	VPS25	P47142	202 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	PUS4	P48567	403 aa	Known RBP	4.57	□□□□□ -1.68
PAL1	YDR348C	AVT4	P50944	713 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	YGL114W	P53134	725 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	RTS3	P53289	263 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	PGA1	P53896	198 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	AAH1	P53909	347 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	EST3	Q03096	181 aa		4.57	□□□□□ -1.68
PAL1	YDR348C	FIT1	Q04433	528 aa		4.57	□□□□□ -1.68

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