RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 KXD1Q9BQD3 176 aa10.93□□□□□ -0.66
PHGDH-212ENST00000641247 LRRC2Q9BYS8 371 aa10.93□□□□□ -0.66
PHGDH-212ENST00000641247 GCOM2Q9BZD3 368 aaPredicted RBP10.93□□□□□ -0.66
PHGDH-212ENST00000641247 GPR62Q9BZJ7 368 aa10.93□□□□□ -0.66
PHGDH-212ENST00000641247 SEMA4GQ9NTN9 838 aa10.93□□□□□ -0.66
PHGDH-212ENST00000641247 EVPLQ92817 2033 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 TM4SF5O14894 197 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 HRO43593 1189 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 PRC1O43663 620 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 ZMYND10O75800 440 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 FOSP01100 380 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-212ENST00000641247 CYP3A4P08684 503 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 KCNA4P22459 653 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 HOXA11P31270 313 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-212ENST00000641247 OR1G1P47890 313 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 GLUD2P49448 558 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 NAPAP54920 295 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 PRKCEQ02156 737 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 DMWDQ09019 674 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 SRSF5Q13243 272 aaKnown RBP10.92□□□□□ -0.66
PHGDH-212ENST00000641247 ZBTB41Q5SVQ8 909 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 CASC1Q6TDU7 716 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 PRR23CQ6ZRP0 262 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 SMAP1Q8IYB5 467 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-212ENST00000641247 SMG8Q8ND04 991 aaKnown RBP10.92□□□□□ -0.66
PHGDH-212ENST00000641247 RABGGTAQ92696 567 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 PKNOX2Q96KN3 472 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 PLEKHA4Q9H4M7 779 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 RSAD1Q9HA92 442 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 IFT122Q9HBG6 1241 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 RXFP3Q9NSD7 469 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 NRBP2Q9NSY0 501 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 FAM217BQ9NTX9 383 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-212ENST00000641247 TBC1D22BQ9NU19 505 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 ZDHHC7Q9NXF8 308 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 GMEB2Q9UKD1 530 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 ANGPTL2Q9UKU9 493 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 CDH7Q9ULB5 785 aa10.92□□□□□ -0.66
PHGDH-212ENST00000641247 CNTNAP5Q8WYK1 1306 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 ATRXP46100 2492 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 CARNS1A5YM72 827 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 SEC24BO95487 1268 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 RETP07949 1114 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 NCLP19338 710 aaKnown RBP10.91□□□□□ -0.66
PHGDH-212ENST00000641247 RPS9P46781 194 aaKnown RBP10.91□□□□□ -0.66
PHGDH-212ENST00000641247 ADCY7P51828 1080 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 DSC1Q08554 894 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 NFXL1Q6ZNB6 911 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 TPRG1Q6ZUI0 275 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 RHPN2Q8IUC4 686 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 ZNF710Q8N1W2 664 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 URGCPQ8TCY9 931 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 RSPH1Q8WYR4 309 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 MAP4K1Q92918 833 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 PHKBQ93100 1093 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 MBOAT7Q96N66 472 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 FAM193BQ96PV7 902 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-212ENST00000641247 MINDY3Q9H8M7 445 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 DISC1Q9NRI5 854 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 HEBP1Q9NRV9 189 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 CACNG4Q9UBN1 327 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 SAMM50Q9Y512 469 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 V9GY48 417 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-212ENST00000641247 DOCK8Q8NF50 2099 aa10.91□□□□□ -0.66
PHGDH-212ENST00000641247 CCDC69A6NI79 296 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 C1QTNF9BB2RNN3 333 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 ADAM12O43184 909 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 C1QTNF9P0C862 333 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 SKIP12755 728 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 SFPQP23246 707 aaKnown RBP eCLIP10.9□□□□□ -0.66
PHGDH-212ENST00000641247 RAB27AP51159 221 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 SHC2P98077 582 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 AP3B2Q13367 1082 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 GAS6Q14393 721 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 ACAP1Q15027 740 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 CSRP2Q16527 193 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 MTERF2Q49AM1 385 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 RTP2Q5QGT7 225 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 L1TD1Q5T7N2 865 aaKnown RBP10.9□□□□□ -0.66
PHGDH-212ENST00000641247 LAIR1Q6GTX8 287 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 PRSS55Q6UWB4 352 aaPredicted RBP10.9□□□□□ -0.66
PHGDH-212ENST00000641247 RSPO2Q6UXX9 243 aaPredicted RBP10.9□□□□□ -0.66
PHGDH-212ENST00000641247 PRR23BQ6ZRT6 265 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 CATSPER4Q7RTX7 472 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 GSTCDQ8NEC7 633 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 PGBD4Q96DM1 585 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 FAM167AQ96KS9 214 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 GAD1Q99259 594 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 NIFKQ9BYG3 293 aaKnown RBP10.9□□□□□ -0.66
PHGDH-212ENST00000641247 UPF2Q9HAU5 1272 aaKnown RBP10.9□□□□□ -0.66
PHGDH-212ENST00000641247 AGPAT5Q9NUQ2 364 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 HCFC1R1Q9NWW0 138 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 SUCLA2Q9P2R7 463 aaPredicted RBP10.9□□□□□ -0.66
PHGDH-212ENST00000641247 STK39Q9UEW8 545 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 SSX2IPQ9Y2D8 614 aa10.9□□□□□ -0.66
PHGDH-212ENST00000641247 ZFP37Q9Y6Q3 630 aaPredicted RBP10.9□□□□□ -0.66
PHGDH-212ENST00000641247 MSH4O15457 936 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 CCL16O15467 120 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 CHMP2AO43633 222 aa10.89□□□□□ -0.67
PHGDH-212ENST00000641247 PROS1P07225 676 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms