RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 SGSM1Q2NKQ1 1148 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 CMPK2Q5EBM0 449 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 IZUMO3Q5VZ72 239 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 POTEAQ6S8J7 498 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 TRIM72Q6ZMU5 477 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 CROCCP3Q8IVE0 287 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 ZNF564Q8TBZ8 553 aaPredicted RBP5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 JADE3Q92613 823 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 MRRFQ96E11 262 aaKnown RBP5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 INTS2Q9H0H0 1204 aaKnown RBP5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 PARVGQ9HBI0 331 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 C1orf112Q9NSG2 853 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 PPARGC1AQ9UBK2 798 aaKnown RBP5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 SLC24A2Q9UI40 661 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 A0A087X0B3 334 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 PP2D1A8MPX8 630 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 ATP9AO75110 1047 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 RTN3O95197 1032 aaPredicted RBP5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 EYA4O95677 639 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 VPS41P49754 854 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 SNRPFP62306 86 aaKnown RBP5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 SLC44A4Q53GD3 710 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 RARS2Q5T160 578 aaKnown RBP5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 TPTE2Q6XPS3 522 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 SLC13A5Q86YT5 568 aaPredicted RBP5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 GSDMBQ8TAX9 411 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 CDKL2Q92772 493 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 ZSWIM1Q9BR11 485 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 MRGBPQ9NV56 204 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 CIDEBQ9UHD4 219 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 SSX2IPQ9Y2D8 614 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 ALG6Q9Y672 507 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 ATRNO75882 1429 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 KDM4FA0A1W2PPD8 638 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 RCCD1A6NED2 376 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 COPEO14579 308 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 TBX3O15119 743 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 EIF3DO15371 548 aaKnown RBP eCLIP5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 AP1G2O75843 785 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 TTC4O95801 387 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 KCNMA1Q12791 1236 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 ZNF211Q13398 564 aaPredicted RBP5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 RCN1Q15293 331 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 LONRF1Q17RB8 773 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 GRAMD1BQ3KR37 738 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 MMEL1Q495T6 779 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 SPDYAQ5MJ70 313 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 SNX30Q5VWJ9 437 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 NLRP9Q7RTR0 991 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 RHOT1Q8IXI2 618 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 GABPB2Q8TAK5 448 aaPredicted RBP5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 GJA10Q969M2 543 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 TEKT1Q969V4 418 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 CMTM5Q96DZ9 223 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 CCDC17Q96LX7 622 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 CDCA7Q9BWT1 371 aaPredicted RBP5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 FRMD8P1Q9BZ68 369 aaPredicted RBP5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 CELF4Q9BZC1 486 aaKnown RBP5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 WDR11Q9BZH6 1224 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 TTYH3Q9C0H2 523 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 LRMDAQ9H2I8 198 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 SLC12A6Q9UHW9 1150 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 APOBEC2Q9Y235 224 aaKnown RBP5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 USTQ9Y2C2 406 aa5.34□□□□□ -1.55
HNRNPU-230ENST00000640657 NWD1Q149M9 1564 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 CAPN9O14815 690 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 SKAP2O75563 359 aaPredicted RBP5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 KRT38O76015 456 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 ADAMTS2O95450 1211 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 RGS2P41220 211 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 DYNLL1P63167 89 aaKnown RBP5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 R3HDM1Q15032 1099 aaKnown RBP5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 MIIPQ5JXC2 388 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 DUPD1Q68J44 220 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 GRAMD4Q6IC98 578 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 EP400NLQ6ZTU2 488 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 GLYCTKQ8IVS8 523 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 CTAGE3PQ8IX95 158 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 STKLD1Q8NE28 680 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 ZC3H15Q8WU90 426 aaKnown RBP5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 BAP1Q92560 729 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 RPGRQ92834 1020 aaKnown RBP5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 MTBPQ96DY7 904 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 NRBF2Q96F24 287 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 ZFRQ96KR1 1074 aaKnown RBP5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 PIGSQ96S52 555 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 KCNK16Q96T55 309 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 SETDB2Q96T68 719 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 BTBD10Q9BSF8 475 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 TSSK1BQ9BXA7 367 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 PHACTR1Q9C0D0 580 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 DHX36Q9H2U1 1008 aaKnown RBP5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 IFT122Q9HBG6 1241 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 DDX56Q9NY93 547 aaKnown RBP5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 PCYOX1Q9UHG3 505 aa5.34□□□□□ -1.56
HNRNPU-230ENST00000640657 MST1RQ04912 1400 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 TM9SF1O15321 606 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 KLRC4O43908 158 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 IFNB1P01574 187 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms