RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	MTMR8	Q96EF0	704 aa		6.55	□□□□□ -1.36
NECAP1-222	ENST00000640072	LRGUK	Q96M69	825 aa		6.55	□□□□□ -1.36
NECAP1-222	ENST00000640072	CFAP57	Q96MR6	1250 aa		6.55	□□□□□ -1.36
NECAP1-222	ENST00000640072	ZPBP	Q9BS86	351 aa		6.55	□□□□□ -1.36
NECAP1-222	ENST00000640072	STMN4	Q9H169	189 aa	Predicted RBP	6.55	□□□□□ -1.36
NECAP1-222	ENST00000640072	LIN28A	Q9H9Z2	209 aa	Known RBP	6.55	□□□□□ -1.36
NECAP1-222	ENST00000640072	ANGPTL2	Q9UKU9	493 aa		6.55	□□□□□ -1.36
NECAP1-222	ENST00000640072	SNX6	Q9UNH7	406 aa		6.55	□□□□□ -1.36
NECAP1-222	ENST00000640072	RTCB	Q9Y3I0	505 aa	Known RBP	6.55	□□□□□ -1.36
NECAP1-222	ENST00000640072	NCK2	O43639	380 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	GLRX3	O76003	335 aa	Known RBP	6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	CHGB	P05060	677 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	GLA	P06280	429 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	STMN1	P16949	149 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	PDC	P20941	246 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	KCNA3	P22001	575 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	CD97	P48960	835 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	PCYT1A	P49585	367 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	GSTM4	Q03013	218 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	PTK2B	Q14289	1009 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	CCDC102B	Q68D86	513 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	TMEM214	Q6NUQ4	689 aa	Known RBP	6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	ZNF704	Q6ZNC4	412 aa	Predicted RBP	6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	LSMEM2	Q8N112	164 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	CCDC197	Q8NCU1	140 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	NSUN7	Q8NE18	718 aa	Known RBP	6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	SHCBP1	Q8NEM2	672 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	NSUN6	Q8TEA1	469 aa	Known RBP	6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	TRIM63	Q969Q1	353 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	DACT3	Q96B18	629 aa	Predicted RBP	6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	GMCL1	Q96IK5	515 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	SEC16B	Q96JE7	1060 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	HS6ST2	Q96MM7	605 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	RTFDC1	Q9BY42	306 aa	Predicted RBP	6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	ACAD9	Q9H845	621 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	KIAA1586	Q9HCI6	787 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	RPRD1B	Q9NQG5	326 aa	Known RBP	6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	TRPS1	Q9UHF7	1281 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	PCDHB2	Q9Y5E7	798 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	OR6C65	A6NJZ3	312 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	SFI1	A8K8P3	1242 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	TRDMT1	O14717	391 aa	Known RBP	6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	KRT2	P35908	639 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	MDH1	P40925	334 aa	Known RBP	6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	CCNF	P41002	786 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	VBP1	P61758	197 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	PLOD1	Q02809	727 aa	Predicted RBP	6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	CTDSPL2	Q05D32	466 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	TRIM71	Q2Q1W2	868 aa	Known RBP	6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	ZBTB41	Q5SVQ8	909 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	FBXO31	Q5XUX0	539 aa	Predicted RBP	6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	FCRLB	Q6BAA4	426 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	RAB12	Q6IQ22	244 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	ABRAXAS1	Q6UWZ7	409 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	ZNF574	Q6ZN55	896 aa	Predicted RBP	6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	PRR23C	Q6ZRP0	262 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	STX12	Q86Y82	276 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	GSPT2	Q8IYD1	628 aa	Known RBP	6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	TTC5	Q8N0Z6	440 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	NOA1	Q8NC60	698 aa	Known RBP	6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	ARRDC4	Q8NCT1	418 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	SEPT1	Q8WYJ6	367 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	FAM149B1	Q96BN6	582 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	TPK1	Q9H3S4	243 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	PALMD	Q9NP74	551 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	ZNF112	Q9UJU3	913 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	ZMIZ1	Q9ULJ6	1067 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	AP1M2	Q9Y6Q5	423 aa		6.54	□□□□□ -1.36
NECAP1-222	ENST00000640072	CDK2AP1	O14519	115 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	POP4	O95707	220 aa	Known RBP	6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	GHR	P10912	638 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	AKR1B1	P15121	316 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	SDS	P20132	328 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	RXRG	P48443	463 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	VCP	P55072	806 aa	Known RBP	6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	POLR2G	P62487	172 aa	Known RBP eCLIP	6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	TFAP4	Q01664	338 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	GOLGA8F	Q08AF8	430 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	GOLGA8DP	Q0D2H9	430 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	PRKG2	Q13237	762 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	COTL1	Q14019	142 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	BORA	Q6PGQ7	559 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	NOSTRIN	Q8IVI9	506 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	OXER1	Q8TDS5	423 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	DNAJC9	Q8WXX5	260 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	CIB1	Q99828	191 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	HAUS8	Q9BT25	410 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	KRT23	Q9C075	422 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	PAG1	Q9NWQ8	432 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	PPP1R14D	Q9NXH3	145 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	PDP2	Q9P2J9	529 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	HECA	Q9UBI9	543 aa	Predicted RBP	6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	CDV3	Q9UKY7	258 aa	Known RBP	6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	SCAF8	Q9UPN6	1271 aa	Known RBP	6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	SLC8A2	Q9UPR5	921 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	HEY1	Q9Y5J3	304 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	FADS3	Q9Y5Q0	445 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	GRIN2B	Q13224	1484 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	MYO3B	Q8WXR4	1341 aa		6.53	□□□□□ -1.36
NECAP1-222	ENST00000640072	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	6.53	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms