RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 GIT2Q14161 759 aa17.43■□□□□ 0.38
SPIN3-233ENST00000640039 NAALADL2Q58DX5 795 aa17.43■□□□□ 0.38
SPIN3-233ENST00000640039 CLLU1OSQ5K130 101 aa17.43■□□□□ 0.38
SPIN3-233ENST00000640039 CDR2LQ86X02 465 aaPredicted RBP17.43■□□□□ 0.38
SPIN3-233ENST00000640039 IQUBQ8NA54 791 aa17.43■□□□□ 0.38
SPIN3-233ENST00000640039 DHX58Q96C10 678 aa17.43■□□□□ 0.38
SPIN3-233ENST00000640039 CASD1Q96PB1 797 aa17.43■□□□□ 0.38
SPIN3-233ENST00000640039 PYM1Q9BRP8 204 aaKnown RBP17.43■□□□□ 0.38
SPIN3-233ENST00000640039 NTPCRQ9BSD7 190 aaKnown RBP17.43■□□□□ 0.38
SPIN3-233ENST00000640039 C11orf84Q9BUA3 381 aaPredicted RBP17.43■□□□□ 0.38
SPIN3-233ENST00000640039 CUEDC2Q9H467 287 aa17.43■□□□□ 0.38
SPIN3-233ENST00000640039 RSAD1Q9HA92 442 aa17.43■□□□□ 0.38
SPIN3-233ENST00000640039 UBN1Q9NPG3 1134 aa17.43■□□□□ 0.38
SPIN3-233ENST00000640039 RNF19AQ9NV58 838 aa17.43■□□□□ 0.38
SPIN3-233ENST00000640039 IPPQ9Y573 584 aa17.43■□□□□ 0.38
SPIN3-233ENST00000640039 CHD7Q9P2D1 2997 aa17.42■□□□□ 0.38
SPIN3-233ENST00000640039 GPM6BQ13491 265 aa17.42■□□□□ 0.38
SPIN3-233ENST00000640039 ATF7IP2Q5U623 682 aa17.42■□□□□ 0.38
SPIN3-233ENST00000640039 RESP18Q5W5W9 173 aa17.42■□□□□ 0.38
SPIN3-233ENST00000640039 DYMQ7RTS9 669 aa17.42■□□□□ 0.38
SPIN3-233ENST00000640039 MRPL10Q7Z7H8 261 aaKnown RBP17.42■□□□□ 0.38
SPIN3-233ENST00000640039 URGCPQ8TCY9 931 aa17.42■□□□□ 0.38
SPIN3-233ENST00000640039 DDX12PQ92771 950 aa17.42■□□□□ 0.38
SPIN3-233ENST00000640039 CHAMP1Q96JM3 812 aa17.42■□□□□ 0.38
SPIN3-233ENST00000640039 APOL6Q9BWW8 343 aa17.42■□□□□ 0.38
SPIN3-233ENST00000640039 PLVAPQ9BX97 442 aa17.42■□□□□ 0.38
SPIN3-233ENST00000640039 MRPL4Q9BYD3 311 aaKnown RBP17.42■□□□□ 0.38
SPIN3-233ENST00000640039 LRRC27Q9C0I9 530 aa17.42■□□□□ 0.38
SPIN3-233ENST00000640039 PDZD7Q9H5P4 517 aa17.42■□□□□ 0.38
SPIN3-233ENST00000640039 TYW1Q9NV66 732 aaKnown RBP17.42■□□□□ 0.38
SPIN3-233ENST00000640039 INPP5FQ9Y2H2 1132 aa17.42■□□□□ 0.38
SPIN3-233ENST00000640039 PCDHB12Q9Y5F1 795 aa17.42■□□□□ 0.38
SPIN3-233ENST00000640039 TCHHQ07283 1943 aa17.42■□□□□ 0.38
SPIN3-233ENST00000640039 COL4A4P53420 1690 aaPredicted RBP17.42■□□□□ 0.38
SPIN3-233ENST00000640039 C5orf67F2Z3F1 127 aa17.41■□□□□ 0.38
SPIN3-233ENST00000640039 K7ENM7 598 aa17.41■□□□□ 0.38
SPIN3-233ENST00000640039 POLR2DO15514 142 aaKnown RBP17.41■□□□□ 0.38
SPIN3-233ENST00000640039 LAG3P18627 525 aa17.41■□□□□ 0.38
SPIN3-233ENST00000640039 SCP2P22307 547 aa17.41■□□□□ 0.38
SPIN3-233ENST00000640039 ZNF131P52739 623 aa17.41■□□□□ 0.38
SPIN3-233ENST00000640039 AMPD3Q01432 767 aa17.41■□□□□ 0.38
SPIN3-233ENST00000640039 RNASELQ05823 741 aaKnown RBP17.41■□□□□ 0.38
SPIN3-233ENST00000640039 NOMO2Q5JPE7 1267 aa17.41■□□□□ 0.38
SPIN3-233ENST00000640039 FAM178BQ8IXR5 827 aa17.41■□□□□ 0.38
SPIN3-233ENST00000640039 SMG8Q8ND04 991 aaKnown RBP17.41■□□□□ 0.38
SPIN3-233ENST00000640039 TMEM161BQ8NDZ6 487 aa17.41■□□□□ 0.38
SPIN3-233ENST00000640039 TNMDQ9H2S6 317 aa17.41■□□□□ 0.38
SPIN3-233ENST00000640039 NXF3Q9H4D5 531 aaKnown RBP17.41■□□□□ 0.38
SPIN3-233ENST00000640039 MAGEF1Q9HAY2 307 aa17.41■□□□□ 0.38
SPIN3-233ENST00000640039 CIZ1Q9ULV3 898 aaPredicted RBP17.41■□□□□ 0.38
SPIN3-233ENST00000640039 KIAA1671Q9BY89 1806 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 MYMKA6NI61 221 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 TTLL13PA6NNM8 815 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 MEIS3P2A8K0S8 358 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 H3BNC9 293 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 TRAK2O60296 914 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 OFD1O75665 1012 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 LINC00271P0C7V0 271 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 MAPTP10636 758 aaKnown RBP17.4■□□□□ 0.38
SPIN3-233ENST00000640039 IDEP14735 1019 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 ABCD1P33897 745 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 NCKAP1LP55160 1127 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 E2F4Q16254 413 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 PTPROQ16827 1216 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 CSPP1Q1MSJ5 1256 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 DCAF4L1Q3SXM0 396 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 NT5DC1Q5TFE4 455 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 ADALQ6DHV7 355 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 AGMOQ6ZNB7 445 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 HAUS6Q7Z4H7 955 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 MICALL1Q8N3F8 863 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 KCNH3Q9ULD8 1083 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 USP20Q9Y2K6 914 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 HES2Q9Y543 173 aa17.4■□□□□ 0.38
SPIN3-233ENST00000640039 GAP43P17677 238 aa17.39■□□□□ 0.37
SPIN3-233ENST00000640039 TJAP1Q5JTD0 557 aa17.39■□□□□ 0.37
SPIN3-233ENST00000640039 TAS1R3Q7RTX0 852 aa17.39■□□□□ 0.37
SPIN3-233ENST00000640039 THNSL1Q8IYQ7 743 aa17.39■□□□□ 0.37
SPIN3-233ENST00000640039 CEP57L1Q8IYX8 460 aa17.39■□□□□ 0.37
SPIN3-233ENST00000640039 COLGALT1Q8NBJ5 622 aa17.39■□□□□ 0.37
SPIN3-233ENST00000640039 P2RX5Q93086 422 aa17.39■□□□□ 0.37
SPIN3-233ENST00000640039 BICD1Q96G01 975 aa17.39■□□□□ 0.37
SPIN3-233ENST00000640039 ZNF558Q96NG5 402 aa17.39■□□□□ 0.37
SPIN3-233ENST00000640039 FAM193BQ96PV7 902 aaPredicted RBP17.39■□□□□ 0.37
SPIN3-233ENST00000640039 ACO2Q99798 780 aaKnown RBP17.39■□□□□ 0.37
SPIN3-233ENST00000640039 TCHPQ9BT92 498 aa17.39■□□□□ 0.37
SPIN3-233ENST00000640039 TARS2Q9BW92 718 aaKnown RBP17.39■□□□□ 0.37
SPIN3-233ENST00000640039 CWH43Q9H720 699 aa17.39■□□□□ 0.37
SPIN3-233ENST00000640039 KANSL3Q9P2N6 904 aa17.39■□□□□ 0.37
SPIN3-233ENST00000640039 HCSTQ9UBK5 93 aa17.39■□□□□ 0.37
SPIN3-233ENST00000640039 SEL1LQ9UBV2 794 aa17.39■□□□□ 0.37
SPIN3-233ENST00000640039 PARP2Q9UGN5 583 aa17.39■□□□□ 0.37
SPIN3-233ENST00000640039 TNFSF13BQ9Y275 285 aa17.39■□□□□ 0.37
SPIN3-233ENST00000640039 GIT1Q9Y2X7 761 aa17.39■□□□□ 0.37
SPIN3-233ENST00000640039 CARNS1A5YM72 827 aa17.38■□□□□ 0.37
SPIN3-233ENST00000640039 LPXNO60711 386 aa17.38■□□□□ 0.37
SPIN3-233ENST00000640039 EDN1P05305 212 aa17.38■□□□□ 0.37
SPIN3-233ENST00000640039 CMA1P23946 247 aa17.38■□□□□ 0.37
SPIN3-233ENST00000640039 ZNF568Q3ZCX4 644 aa17.38■□□□□ 0.37
SPIN3-233ENST00000640039 TPRNQ4KMQ1 711 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms