RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 MBTD1Q05BQ5 628 aa16.73■□□□□ 0.27
CLN6-219ENST00000637329 ARID5BQ14865 1188 aa16.73■□□□□ 0.27
CLN6-219ENST00000637329 PCBP1Q15365 356 aaKnown RBP eCLIP16.73■□□□□ 0.27
CLN6-219ENST00000637329 SNRNP35Q16560 246 aaKnown RBP16.73■□□□□ 0.27
CLN6-219ENST00000637329 GNASQ5JWF2 1037 aa16.73■□□□□ 0.27
CLN6-219ENST00000637329 TCERG1LQ5VWI1 586 aa16.73■□□□□ 0.27
CLN6-219ENST00000637329 NAA15Q9BXJ9 866 aaKnown RBP16.73■□□□□ 0.27
CLN6-219ENST00000637329 EDEM3Q9BZQ6 932 aa16.73■□□□□ 0.27
CLN6-219ENST00000637329 FZD8Q9H461 694 aa16.73■□□□□ 0.27
CLN6-219ENST00000637329 PCIF1Q9H4Z3 704 aa16.73■□□□□ 0.27
CLN6-219ENST00000637329 SETD4Q9NVD3 440 aa16.73■□□□□ 0.27
CLN6-219ENST00000637329 CAPN11Q9UMQ6 739 aa16.73■□□□□ 0.27
CLN6-219ENST00000637329 CNTNAP2Q9UHC6 1331 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 C17orf102A2RUQ5 167 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 MYADML2A6NDP7 307 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 ACKR2O00590 384 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 PMM2O15305 246 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 P4HA2O15460 535 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 EXTL3O43909 919 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 FECHP22830 423 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 CASP14P31944 242 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 GPC3P51654 580 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 VAMP7P51809 220 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 CCZ1BP86790 482 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 CCZ1P86791 482 aaPredicted RBP16.72■□□□□ 0.27
CLN6-219ENST00000637329 RBL2Q08999 1139 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 PTPN21Q16825 1174 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 SRGAP1Q7Z6B7 1085 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 KIAA0319LQ8IZA0 1049 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 C7orf31Q8N865 590 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 PCSK9Q8NBP7 692 aaKnown RBP16.72■□□□□ 0.27
CLN6-219ENST00000637329 KLHDC9Q8NEP7 349 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 TMC2Q8TDI7 906 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 TMX1Q9H3N1 280 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 IFT122Q9HBG6 1241 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 AGO2Q9UKV8 859 aaKnown RBP16.72■□□□□ 0.27
CLN6-219ENST00000637329 FRMPD3Q5JV73 1810 aa16.72■□□□□ 0.27
CLN6-219ENST00000637329 A0A0B4J269 797 aa16.71■□□□□ 0.27
CLN6-219ENST00000637329 CABYRO75952 493 aa16.71■□□□□ 0.27
CLN6-219ENST00000637329 PGK1P00558 417 aa16.71■□□□□ 0.27
CLN6-219ENST00000637329 INHAP05111 366 aa16.71■□□□□ 0.27
CLN6-219ENST00000637329 GRK4P32298 578 aa16.71■□□□□ 0.27
CLN6-219ENST00000637329 LRMPQ12912 555 aa16.71■□□□□ 0.27
CLN6-219ENST00000637329 TAF2Q6P1X5 1199 aa16.71■□□□□ 0.27
CLN6-219ENST00000637329 TSHZ1Q6ZSZ6 1077 aa16.71■□□□□ 0.27
CLN6-219ENST00000637329 SESTD1Q86VW0 696 aa16.71■□□□□ 0.27
CLN6-219ENST00000637329 ZNF397Q8NF99 534 aaPredicted RBP16.71■□□□□ 0.27
CLN6-219ENST00000637329 NEK11Q8NG66 645 aa16.71■□□□□ 0.27
CLN6-219ENST00000637329 MFSD14AQ96MC6 490 aa16.71■□□□□ 0.27
CLN6-219ENST00000637329 PCMTD1Q96MG8 357 aaPredicted RBP16.71■□□□□ 0.27
CLN6-219ENST00000637329 DNAJC7Q99615 494 aa16.71■□□□□ 0.27
CLN6-219ENST00000637329 ACO2Q99798 780 aaKnown RBP16.71■□□□□ 0.27
CLN6-219ENST00000637329 TARS2Q9BW92 718 aaKnown RBP16.71■□□□□ 0.27
CLN6-219ENST00000637329 PLCB1Q9NQ66 1216 aa16.71■□□□□ 0.27
CLN6-219ENST00000637329 ABHD10Q9NUJ1 306 aa16.71■□□□□ 0.27
CLN6-219ENST00000637329 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.71■□□□□ 0.27
CLN6-219ENST00000637329 LUC7L2Q9Y383 392 aaKnown RBP16.71■□□□□ 0.27
CLN6-219ENST00000637329 TTC26A0AVF1 554 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 INO80B-WBP1J3KQ70 363 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 VTNP04004 478 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 EDN1P05305 212 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 ADRB2P07550 413 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 GJB1P08034 283 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 CYP2C9P11712 490 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 SKILP12757 684 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 PROZP22891 400 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 GTF2H1P32780 548 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 FMO5P49326 533 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 IRX5P78411 483 aaPredicted RBP16.7■□□□□ 0.26
CLN6-219ENST00000637329 ZBED6P86452 979 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 MYL7Q01449 175 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 MCL1Q07820 350 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 CYP24A1Q07973 514 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 PRPF4BQ13523 1007 aaKnown RBP16.7■□□□□ 0.26
CLN6-219ENST00000637329 EXOC3L4Q17RC7 722 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 CCSAPQ6IQ19 270 aaPredicted RBP16.7■□□□□ 0.26
CLN6-219ENST00000637329 MPZL3Q6UWV2 235 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 GBP6Q6ZN66 633 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 RNF180Q86T96 592 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 NME8Q8N427 588 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 NLRP7Q8WX94 980 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 ZBTB10Q96DT7 871 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 SAAL1Q96ER3 474 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 MSTO1Q9BUK6 570 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 INO80BQ9C086 356 aaPredicted RBP16.7■□□□□ 0.26
CLN6-219ENST00000637329 NUCKS1Q9H1E3 243 aaKnown RBP16.7■□□□□ 0.26
CLN6-219ENST00000637329 CEP72Q9P209 647 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 ANKFY1Q9P2R3 1169 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 GTF2IRD1Q9UHL9 959 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 FBXL5Q9UKA1 691 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 TNFSF13BQ9Y275 285 aa16.7■□□□□ 0.26
CLN6-219ENST00000637329 A0A087WZ62 844 aa16.69■□□□□ 0.26
CLN6-219ENST00000637329 ZNF233A6NK53 670 aa16.69■□□□□ 0.26
CLN6-219ENST00000637329 CLDN3O15551 220 aa16.69■□□□□ 0.26
CLN6-219ENST00000637329 ARHGAP6O43182 974 aa16.69■□□□□ 0.26
CLN6-219ENST00000637329 RFX1P22670 979 aa16.69■□□□□ 0.26
CLN6-219ENST00000637329 ADKP55263 362 aaKnown RBP16.69■□□□□ 0.26
CLN6-219ENST00000637329 KCNMA1Q12791 1236 aa16.69■□□□□ 0.26
CLN6-219ENST00000637329 CETN1Q12798 172 aa16.69■□□□□ 0.26
CLN6-219ENST00000637329 NOLC1Q14978 699 aaKnown RBP eCLIP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms