RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 RDM1Q8NG50 284 aa16.86■□□□□ 0.29
CLN8-209ENST00000635970 ERGIC2Q96RQ1 377 aa16.86■□□□□ 0.29
CLN8-209ENST00000635970 PRDM5Q9NQX1 630 aaPredicted RBP16.86■□□□□ 0.29
CLN8-209ENST00000635970 SETD4Q9NVD3 440 aa16.86■□□□□ 0.29
CLN8-209ENST00000635970 GOLGA6AQ9NYA3 693 aa16.86■□□□□ 0.29
CLN8-209ENST00000635970 RGL1Q9NZL6 768 aa16.86■□□□□ 0.29
CLN8-209ENST00000635970 WRAP73Q9P2S5 460 aaPredicted RBP16.86■□□□□ 0.29
CLN8-209ENST00000635970 TRPC6Q9Y210 931 aa16.86■□□□□ 0.29
CLN8-209ENST00000635970 PDE4DIPQ5VU43 2346 aa16.86■□□□□ 0.29
CLN8-209ENST00000635970 TACC1O75410 805 aa16.86■□□□□ 0.29
CLN8-209ENST00000635970 CD4P01730 458 aa16.86■□□□□ 0.29
CLN8-209ENST00000635970 EPB41P11171 864 aaKnown RBP16.86■□□□□ 0.29
CLN8-209ENST00000635970 SYN1P17600 705 aa16.86■□□□□ 0.29
CLN8-209ENST00000635970 TNFRSF8P28908 595 aa16.86■□□□□ 0.29
CLN8-209ENST00000635970 PRPHP41219 470 aa16.86■□□□□ 0.29
CLN8-209ENST00000635970 PRKCEQ02156 737 aa16.86■□□□□ 0.29
CLN8-209ENST00000635970 SESTD1Q86VW0 696 aa16.86■□□□□ 0.29
CLN8-209ENST00000635970 ZBTB10Q96DT7 871 aa16.86■□□□□ 0.29
CLN8-209ENST00000635970 PDLIM7Q9NR12 457 aa16.86■□□□□ 0.29
CLN8-209ENST00000635970 SNX12Q9UMY4 172 aa16.86■□□□□ 0.29
CLN8-209ENST00000635970 POTEB3A0JP26 581 aa16.85■□□□□ 0.29
CLN8-209ENST00000635970 TMEM150BA6NC51 233 aa16.85■□□□□ 0.29
CLN8-209ENST00000635970 DCDC2CA8MYV0 355 aa16.85■□□□□ 0.29
CLN8-209ENST00000635970 RBAK-RBAKDNI3L0D1 243 aa16.85■□□□□ 0.29
CLN8-209ENST00000635970 CLTBP09497 229 aa16.85■□□□□ 0.29
CLN8-209ENST00000635970 CYP2C9P11712 490 aa16.85■□□□□ 0.29
CLN8-209ENST00000635970 TCP1P17987 556 aaKnown RBP16.85■□□□□ 0.29
CLN8-209ENST00000635970 CCNE1P24864 410 aa16.85■□□□□ 0.29
CLN8-209ENST00000635970 IGBP1P78318 339 aa16.85■□□□□ 0.29
CLN8-209ENST00000635970 TBC1D8BQ0IIM8 1120 aa16.85■□□□□ 0.29
CLN8-209ENST00000635970 GLE1Q53GS7 698 aaKnown RBP16.85■□□□□ 0.29
CLN8-209ENST00000635970 EMBQ6PCB8 327 aa16.85■□□□□ 0.29
CLN8-209ENST00000635970 POTEBQ6S5H4 581 aa16.85■□□□□ 0.29
CLN8-209ENST00000635970 LMBR1Q8WVP7 490 aa16.85■□□□□ 0.29
CLN8-209ENST00000635970 TRAPPC12Q8WVT3 735 aa16.85■□□□□ 0.29
CLN8-209ENST00000635970 DYDC2Q96IM9 177 aa16.85■□□□□ 0.29
CLN8-209ENST00000635970 AK8Q96MA6 479 aa16.85■□□□□ 0.29
CLN8-209ENST00000635970 TOX2Q96NM4 488 aa16.85■□□□□ 0.29
CLN8-209ENST00000635970 LXNQ9BS40 222 aa16.85■□□□□ 0.29
CLN8-209ENST00000635970 TANC1Q9C0D5 1861 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 C17orf102A2RUQ5 167 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 AGPSO00116 658 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 PES1O00541 588 aaKnown RBP16.84■□□□□ 0.29
CLN8-209ENST00000635970 EBAG9O00559 213 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 KLRC4O43908 158 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 HOXC8P31273 242 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 UBA7P41226 1012 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 FXR2P51116 673 aaKnown RBP eCLIP16.84■□□□□ 0.29
CLN8-209ENST00000635970 CTTNQ14247 550 aaKnown RBP16.84■□□□□ 0.29
CLN8-209ENST00000635970 EPHA7Q15375 998 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 PTGISQ16647 500 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 TMEM266Q2M3C6 531 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 FKBP15Q5T1M5 1219 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 TADA2BQ86TJ2 420 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 SUGP1Q8IWZ8 645 aaKnown RBP16.84■□□□□ 0.29
CLN8-209ENST00000635970 CSGALNACT2Q8N6G5 542 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 ATP8B4Q8TF62 1192 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 SH3GL2Q99962 352 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 EIF2AK1Q9BQI3 630 aaKnown RBP16.84■□□□□ 0.29
CLN8-209ENST00000635970 RNF14Q9UBS8 474 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 ZMYND8Q9ULU4 1186 aaPredicted RBP16.84■□□□□ 0.29
CLN8-209ENST00000635970 EVPLQ92817 2033 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 PP2D1A8MPX8 630 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 SRGAP2O75044 1071 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 INSRRP14616 1297 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 SLC26A2P50443 739 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 PTPN11Q06124 597 aaPredicted RBP16.84■□□□□ 0.29
CLN8-209ENST00000635970 NNTQ13423 1086 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 GRIK4Q16099 956 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 SPATS2Q86XZ4 545 aaKnown RBP16.84■□□□□ 0.29
CLN8-209ENST00000635970 ATP6V0A1Q93050 837 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 CCDC42Q96M95 316 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 SH2D3AQ9BRG2 576 aa16.84■□□□□ 0.29
CLN8-209ENST00000635970 ATXN2Q99700 1313 aaKnown RBP16.83■□□□□ 0.29
CLN8-209ENST00000635970 TRIM43BA6NCK2 446 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 TRIM49BA6NDI0 452 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 TLR3O15455 904 aaKnown RBP16.83■□□□□ 0.28
CLN8-209ENST00000635970 TREHO43280 583 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 LCA5LO95447 670 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 OATP04181 439 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 IRAK1P51617 712 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 EPHB4P54760 987 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 AMPD3Q01432 767 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 APBA1Q02410 837 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 NAALADL2Q58DX5 795 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 CREG2Q8IUH2 290 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 P2RX5Q93086 422 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 WNT8BQ93098 351 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 TRIM43Q96BQ3 446 aaPredicted RBP16.83■□□□□ 0.28
CLN8-209ENST00000635970 CAPZA3Q96KX2 299 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 ALS2CR12Q96Q35 445 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 SEZ6LQ9BYH1 1024 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 PLAGL2Q9UPG8 496 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 MAPK8IP1Q9UQF2 711 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 NOD1Q9Y239 953 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 SIP14410 1827 aa16.83■□□□□ 0.28
CLN8-209ENST00000635970 SCN5AQ14524 2016 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 ZBTB42B2RXF5 422 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 SLITRK3O94933 977 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 P4HBP07237 508 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms