RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	RAB27A	P51159	221 aa		28.55	■■■□□ 2.16
UBE3A-222	ENST00000630907	L1TD1	Q5T7N2	865 aa	Known RBP	28.55	■■■□□ 2.16
UBE3A-222	ENST00000630907	SLC27A1	Q6PCB7	646 aa		28.55	■■■□□ 2.16
UBE3A-222	ENST00000630907	ZPBP2	Q6X784	338 aa		28.55	■■■□□ 2.16
UBE3A-222	ENST00000630907	GLIS3	Q8NEA6	775 aa		28.55	■■■□□ 2.16
UBE3A-222	ENST00000630907	ERCC4	Q92889	916 aa	Predicted RBP	28.55	■■■□□ 2.16
UBE3A-222	ENST00000630907	SMARCE1	Q969G3	411 aa		28.55	■■■□□ 2.16
UBE3A-222	ENST00000630907	TOP1MT	Q969P6	601 aa		28.55	■■■□□ 2.16
UBE3A-222	ENST00000630907	ACCS	Q96QU6	501 aa		28.55	■■■□□ 2.16
UBE3A-222	ENST00000630907	FAM105A	Q9NUU6	356 aa		28.55	■■■□□ 2.16
UBE3A-222	ENST00000630907	RNF216	Q9NWF9	866 aa	Predicted RBP	28.55	■■■□□ 2.16
UBE3A-222	ENST00000630907	PCDHA5	Q9Y5H7	936 aa		28.55	■■■□□ 2.16
UBE3A-222	ENST00000630907	PRPF6	O94906	941 aa	Known RBP	28.54	■■■□□ 2.16
UBE3A-222	ENST00000630907	MBD3	O95983	291 aa		28.54	■■■□□ 2.16
UBE3A-222	ENST00000630907	CAMK4	Q16566	473 aa		28.54	■■■□□ 2.16
UBE3A-222	ENST00000630907	EEF1DP3	Q658K8	133 aa		28.54	■■■□□ 2.16
UBE3A-222	ENST00000630907	ECHDC2	Q86YB7	292 aa		28.54	■■■□□ 2.16
UBE3A-222	ENST00000630907	SPATA20	Q8TB22	786 aa		28.54	■■■□□ 2.16
UBE3A-222	ENST00000630907	GSDMA	Q96QA5	445 aa		28.54	■■■□□ 2.16
UBE3A-222	ENST00000630907	ADPGK	Q9BRR6	497 aa		28.54	■■■□□ 2.16
UBE3A-222	ENST00000630907	EIF2A	Q9BY44	585 aa	Known RBP	28.54	■■■□□ 2.16
UBE3A-222	ENST00000630907	CLSTN2	Q9H4D0	955 aa		28.54	■■■□□ 2.16
UBE3A-222	ENST00000630907	RMND1	Q9NWS8	449 aa		28.54	■■■□□ 2.16
UBE3A-222	ENST00000630907	EXOC7	Q9UPT5	735 aa		28.54	■■■□□ 2.16
UBE3A-222	ENST00000630907	PCDHB7	Q9Y5E2	793 aa		28.54	■■■□□ 2.16
UBE3A-222	ENST00000630907	PCDHB2	Q9Y5E7	798 aa		28.54	■■■□□ 2.16
UBE3A-222	ENST00000630907	EIF3D	O15371	548 aa	Known RBP eCLIP	28.53	■■■□□ 2.16
UBE3A-222	ENST00000630907	UPP2	O95045	317 aa		28.53	■■■□□ 2.16
UBE3A-222	ENST00000630907	NPTXR	O95502	500 aa		28.53	■■■□□ 2.16
UBE3A-222	ENST00000630907	PIGR	P01833	764 aa		28.53	■■■□□ 2.16
UBE3A-222	ENST00000630907	STAG3L1	P0CL83	205 aa		28.53	■■■□□ 2.16
UBE3A-222	ENST00000630907	LIG4	P49917	911 aa		28.53	■■■□□ 2.16
UBE3A-222	ENST00000630907	STK4	Q13043	487 aa		28.53	■■■□□ 2.16
UBE3A-222	ENST00000630907	EPM2AIP1	Q7L775	607 aa	Predicted RBP	28.53	■■■□□ 2.16
UBE3A-222	ENST00000630907	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	28.53	■■■□□ 2.16
UBE3A-222	ENST00000630907	NPAS4	Q8IUM7	802 aa		28.53	■■■□□ 2.16
UBE3A-222	ENST00000630907	HERC6	Q8IVU3	1022 aa		28.53	■■■□□ 2.16
UBE3A-222	ENST00000630907	TRIM6	Q9C030	488 aa	Predicted RBP	28.53	■■■□□ 2.16
UBE3A-222	ENST00000630907	ELAC1	Q9H777	363 aa	Known RBP	28.53	■■■□□ 2.16
UBE3A-222	ENST00000630907	LRFN2	Q9ULH4	789 aa		28.53	■■■□□ 2.16
UBE3A-222	ENST00000630907	HNRNPDL	O14979	420 aa	Known RBP	28.52	■■■□□ 2.16
UBE3A-222	ENST00000630907	ZNF623	O75123	536 aa		28.52	■■■□□ 2.16
UBE3A-222	ENST00000630907	KCNA1	Q09470	495 aa		28.52	■■■□□ 2.16
UBE3A-222	ENST00000630907	FAM117B	Q6P1L5	589 aa		28.52	■■■□□ 2.16
UBE3A-222	ENST00000630907	TMCO2	Q7Z6W1	182 aa	Predicted RBP	28.52	■■■□□ 2.16
UBE3A-222	ENST00000630907	ZNF507	Q8TCN5	953 aa		28.52	■■■□□ 2.16
UBE3A-222	ENST00000630907	TCHP	Q9BT92	498 aa		28.52	■■■□□ 2.16
UBE3A-222	ENST00000630907	TMEM206	Q9H813	350 aa		28.52	■■■□□ 2.16
UBE3A-222	ENST00000630907	PTPRH	Q9HD43	1115 aa		28.52	■■■□□ 2.16
UBE3A-222	ENST00000630907	TMEM161A	Q9NX61	479 aa		28.52	■■■□□ 2.16
UBE3A-222	ENST00000630907	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	28.51	■■■□□ 2.15
UBE3A-222	ENST00000630907	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	28.51	■■■□□ 2.15
UBE3A-222	ENST00000630907	TOM1L1	O75674	476 aa		28.51	■■■□□ 2.15
UBE3A-222	ENST00000630907	EOMES	O95936	686 aa		28.51	■■■□□ 2.15
UBE3A-222	ENST00000630907	PROZ	P22891	400 aa		28.51	■■■□□ 2.15
UBE3A-222	ENST00000630907	DCAF4L1	Q3SXM0	396 aa		28.51	■■■□□ 2.15
UBE3A-222	ENST00000630907	MRPL10	Q7Z7H8	261 aa	Known RBP	28.51	■■■□□ 2.15
UBE3A-222	ENST00000630907	ZNF598	Q86UK7	904 aa	Known RBP	28.51	■■■□□ 2.15
UBE3A-222	ENST00000630907	SYCP3	Q8IZU3	236 aa		28.51	■■■□□ 2.15
UBE3A-222	ENST00000630907	CRIPAK	Q8N1N5	446 aa		28.51	■■■□□ 2.15
UBE3A-222	ENST00000630907	RNF169	Q8NCN4	708 aa		28.51	■■■□□ 2.15
UBE3A-222	ENST00000630907	KIAA0895	Q8NCT3	520 aa		28.51	■■■□□ 2.15
UBE3A-222	ENST00000630907	SCFD1	Q8WVM8	642 aa		28.51	■■■□□ 2.15
UBE3A-222	ENST00000630907	ZBED2	Q9BTP6	218 aa		28.51	■■■□□ 2.15
UBE3A-222	ENST00000630907	NUP62CL	Q9H1M0	184 aa		28.51	■■■□□ 2.15
UBE3A-222	ENST00000630907	UBE4B	O95155	1302 aa		28.5	■■■□□ 2.15
UBE3A-222	ENST00000630907	GJB5	O95377	273 aa		28.5	■■■□□ 2.15
UBE3A-222	ENST00000630907	ZNF568	Q3ZCX4	644 aa		28.5	■■■□□ 2.15
UBE3A-222	ENST00000630907	MPZL3	Q6UWV2	235 aa		28.5	■■■□□ 2.15
UBE3A-222	ENST00000630907	PGBD4	Q96DM1	585 aa		28.5	■■■□□ 2.15
UBE3A-222	ENST00000630907	ZBTB45	Q96K62	511 aa	Predicted RBP	28.5	■■■□□ 2.15
UBE3A-222	ENST00000630907	IPP	Q9Y573	584 aa		28.5	■■■□□ 2.15
UBE3A-222	ENST00000630907	TTC3	P53804	2025 aa		28.5	■■■□□ 2.15
UBE3A-222	ENST00000630907	GRXCR1	A8MXD5	290 aa		28.49	■■■□□ 2.15
UBE3A-222	ENST00000630907	ATF7	P17544	494 aa	Predicted RBP	28.49	■■■□□ 2.15
UBE3A-222	ENST00000630907	PTMS	P20962	102 aa		28.49	■■■□□ 2.15
UBE3A-222	ENST00000630907	BMT2	Q1RMZ1	405 aa		28.49	■■■□□ 2.15
UBE3A-222	ENST00000630907	FAM109B	Q6ICB4	259 aa	Predicted RBP	28.49	■■■□□ 2.15
UBE3A-222	ENST00000630907	ZBTB33	Q86T24	672 aa		28.49	■■■□□ 2.15
UBE3A-222	ENST00000630907	SMG8	Q8ND04	991 aa	Known RBP	28.49	■■■□□ 2.15
UBE3A-222	ENST00000630907	ANKFY1	Q9P2R3	1169 aa		28.49	■■■□□ 2.15
UBE3A-222	ENST00000630907	ANKRD63	C9JTQ0	380 aa		28.48	■■■□□ 2.15
UBE3A-222	ENST00000630907	ABLIM1	O14639	778 aa		28.48	■■■□□ 2.15
UBE3A-222	ENST00000630907	CLDN3	O15551	220 aa		28.48	■■■□□ 2.15
UBE3A-222	ENST00000630907	MCF2	P10911	925 aa		28.48	■■■□□ 2.15
UBE3A-222	ENST00000630907	MATR3	P43243	847 aa	Known RBP eCLIP	28.48	■■■□□ 2.15	8e-11	■■■■■ 38.8
UBE3A-222	ENST00000630907	SLC39A4	Q6P5W5	647 aa		28.48	■■■□□ 2.15
UBE3A-222	ENST00000630907	HACE1	Q8IYU2	909 aa		28.48	■■■□□ 2.15
UBE3A-222	ENST00000630907	CDT1	Q9H211	546 aa		28.48	■■■□□ 2.15
UBE3A-222	ENST00000630907	IKZF4	Q9H2S9	585 aa		28.48	■■■□□ 2.15
UBE3A-222	ENST00000630907	KIAA1468	Q9P260	1216 aa		28.48	■■■□□ 2.15
UBE3A-222	ENST00000630907	MAN1B1	Q9UKM7	699 aa		28.48	■■■□□ 2.15
UBE3A-222	ENST00000630907	GDA	Q9Y2T3	454 aa		28.48	■■■□□ 2.15
UBE3A-222	ENST00000630907	ITGA4	P13612	1032 aa		28.47	■■■□□ 2.15
UBE3A-222	ENST00000630907	HOXD13	P35453	343 aa		28.47	■■■□□ 2.15
UBE3A-222	ENST00000630907	MCL1	Q07820	350 aa		28.47	■■■□□ 2.15
UBE3A-222	ENST00000630907	SLFN12L	Q6IEE8	588 aa		28.47	■■■□□ 2.15
UBE3A-222	ENST00000630907	NELFCD	Q8IXH7	590 aa		28.47	■■■□□ 2.15
UBE3A-222	ENST00000630907	LPP	Q93052	612 aa		28.47	■■■□□ 2.15
UBE3A-222	ENST00000630907	GTPBP4	Q9BZE4	634 aa	Known RBP	28.47	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms