RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 STARD7Q9NQZ5 370 aa11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 TELO2Q9Y4R8 837 aa11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 GTPBP10A4D1E9 387 aaKnown RBP11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 TLR3O15455 904 aaKnown RBP11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 TGFB1I1O43294 461 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 EXTL3O43909 919 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 AFPP02771 609 aaKnown RBP11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 ATP1A3P13637 1013 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 TRIM21P19474 475 aaKnown RBP11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 GTF2H1P32780 548 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 CYP2J2P51589 502 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 CRYBB1P53674 252 aaPredicted RBP11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 NLRP11P59045 1033 aaKnown RBP11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 ITGA7Q13683 1181 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 NR1I3Q14994 352 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 NBPF20Q3BBV1 942 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 DCAF4L1Q3SXM0 396 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 TMEM63BQ5T3F8 832 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 RPAINQ86UA6 219 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 LINC01465Q8N7H1 131 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 USP38Q8NB14 1042 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 CCDC112Q8NEF3 446 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 TMC2Q8TDI7 906 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 BSNDQ8WZ55 320 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 CCDC51Q96ER9 411 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 MSTO1Q9BUK6 570 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 RNF208Q9H0X6 261 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 VPS16Q9H269 839 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 DMAC2Q9NW81 257 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 ZNHIT6Q9NWK9 470 aaKnown RBP11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 TAB2Q9NYJ8 693 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 HSPBP1Q9NZL4 362 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 HDAC6Q9UBN7 1215 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 AGO2Q9UKV8 859 aaKnown RBP11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 TNFSF13BQ9Y275 285 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 R3HCC1Q9Y3T6 440 aaKnown RBP11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 STYXL1Q9Y6J8 313 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 ZSWIM8A7E2V4 1837 aa11.06□□□□□ -0.64
FOXCUT-201ENST00000628509 CLIC2O15247 247 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 PARNO95453 639 aaKnown RBP11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 CCDC172P0C7W6 258 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 RFX1P22670 979 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 HOXC8P31273 242 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 GPC3P51654 580 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 VAMP7P51809 220 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 BFSP1Q12934 665 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 PTK7Q13308 1070 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 SNRNP35Q16560 246 aaKnown RBP11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 HSP90AA4PQ58FG1 418 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 DCAF17Q5H9S7 520 aaPredicted RBP11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 ATF7IP2Q5U623 682 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 SMYD5Q6GMV2 418 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 NOTUMQ6P988 496 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 MPZL3Q6UWV2 235 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 TSHZ1Q6ZSZ6 1077 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 TMC6Q7Z403 805 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 VSTM4Q8IW00 320 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 TRIM59Q8IWR1 403 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 CD302Q8IX05 232 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 KIAA0319LQ8IZA0 1049 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 GLIS3Q8NEA6 775 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 TRAPPC12Q8WVT3 735 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 LENG1Q96BZ8 264 aaPredicted RBP11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 ERGIC2Q96RQ1 377 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 TSPAN18Q96SJ8 248 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 NAA15Q9BXJ9 866 aaKnown RBP11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 EDEM3Q9BZQ6 932 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 FAM49AQ9H0Q0 323 aaPredicted RBP11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 HSD3B7Q9H2F3 369 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 FZD8Q9H461 694 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 POLD4Q9HCU8 107 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 PCDH10Q9P2E7 1040 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 SQORQ9Y6N5 450 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 CNTNAP2Q9UHC6 1331 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 SCN10AQ9Y5Y9 1956 aa11.05□□□□□ -0.64
FOXCUT-201ENST00000628509 ZMYM2Q9UBW7 1377 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 EVPLQ92817 2033 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 A0A087WZ62 844 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 GPR182O15218 404 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 OGTO15294 1046 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 IL18RAPO95256 599 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 MCF2P10911 925 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 SKIP12755 728 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 EIF4BP23588 611 aaKnown RBP11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 SOX10P56693 466 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 ADAM17P78536 824 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 TRIM32Q13049 653 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 BFSP2Q13515 415 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 NOLC1Q14978 699 aaKnown RBP eCLIP11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 PTGISQ16647 500 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 ZNF568Q3ZCX4 644 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 FIGNQ5HY92 759 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 MARCH8Q5T0T0 291 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 GBP6Q6ZN66 633 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 CATSPER4Q7RTX7 472 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 ANKLE1Q8NAG6 615 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 NEK11Q8NG66 645 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 MED15Q96RN5 788 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 FDXACB1Q9BRP7 624 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms