RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 CELF4Q9BZC1 486 aaKnown RBP7.51□□□□□ -1.21
CDKL5-204ENST00000623364 CPNE5Q9HCH3 593 aa7.51□□□□□ -1.21
CDKL5-204ENST00000623364 COPRSQ9NQ92 184 aa7.51□□□□□ -1.21
CDKL5-204ENST00000623364 DNAAF2Q9NVR5 837 aaKnown RBP7.51□□□□□ -1.21
CDKL5-204ENST00000623364 PNMA2Q9UL42 364 aa7.51□□□□□ -1.21
CDKL5-204ENST00000623364 CELSR1Q9NYQ6 3014 aa7.51□□□□□ -1.21
CDKL5-204ENST00000623364 ZMYM6O95789 1325 aa7.51□□□□□ -1.21
CDKL5-204ENST00000623364 TEX28O15482 410 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 GAS2O43903 313 aaKnown RBP7.5□□□□□ -1.21
CDKL5-204ENST00000623364 RPS6KA5O75582 802 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 C1RP00736 705 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 URODP06132 367 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 RASA1P20936 1047 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 ZAP70P43403 619 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 AFMP43652 599 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 TMEM62Q0P6H9 643 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 PPFIA1Q13136 1202 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 MMRN1Q13201 1228 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 USP39Q53GS9 565 aaKnown RBP7.5□□□□□ -1.21
CDKL5-204ENST00000623364 CCDC158Q5M9N0 1113 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 C12orf60Q5U649 245 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 TANGO2Q6ICL3 276 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 MAP4K3Q8IVH8 894 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 NPAS3Q8IXF0 933 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 TSC1Q92574 1164 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 TMEM176AQ96HP8 235 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 GMCL1Q96IK5 515 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 LGMNQ99538 433 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 USP44Q9H0E7 712 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 OCEL1Q9H607 264 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 GPRC5CQ9NQ84 441 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 RNF19AQ9NV58 838 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 GDE1Q9NZC3 331 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.5□□□□□ -1.21
CDKL5-204ENST00000623364 SLC6A14Q9UN76 642 aa7.5□□□□□ -1.21
CDKL5-204ENST00000623364 MTCL1Q9Y4B5 1905 aaKnown RBP7.5□□□□□ -1.21
CDKL5-204ENST00000623364 NIPBLQ6KC79 2804 aaeCLIP7.5□□□□□ -1.21
CDKL5-204ENST00000623364 GREB1LQ9C091 1923 aaPredicted RBP7.49□□□□□ -1.21
CDKL5-204ENST00000623364 CYP2D7A0A087X1C5 515 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 MBLAC1A4D2B0 266 aaPredicted RBP7.49□□□□□ -1.21
CDKL5-204ENST00000623364 BHMG1C9JSJ3 638 aaPredicted RBP7.49□□□□□ -1.21
CDKL5-204ENST00000623364 GPR182O15218 404 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 DIAPH2O60879 1101 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 ATP9AO75110 1047 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 TTLL1O95922 423 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 GDI1P31150 447 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 KPNA1P52294 538 aaPredicted RBP7.49□□□□□ -1.21
CDKL5-204ENST00000623364 KRT76Q01546 638 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 EML3Q32P44 896 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 ZNF787Q6DD87 383 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 VSIG10LQ86VR7 867 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 TRIM50Q86XT4 487 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 MMP21Q8N119 569 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 RNF169Q8NCN4 708 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 CSGALNACT1Q8TDX6 532 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 BCL7CQ8WUZ0 217 aaPredicted RBP7.49□□□□□ -1.21
CDKL5-204ENST00000623364 RPS6KC1Q96S38 1066 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 GAD1Q99259 594 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 VN1R3Q9BXE9 311 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 C8orf33Q9H7E9 229 aaPredicted RBP7.49□□□□□ -1.21
CDKL5-204ENST00000623364 ZFP14Q9HCL3 533 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 STARD5Q9NSY2 213 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 KCNH3Q9ULD8 1083 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 INVSQ9Y283 1065 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 HIVEP3Q5T1R4 2406 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 KDM3AQ9Y4C1 1321 aa7.49□□□□□ -1.21
CDKL5-204ENST00000623364 ADAMTS9Q9P2N4 1935 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 TNFRSF10BO14763 440 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 ZNF263O14978 683 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 XYLBO75191 536 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 HNRNPA1P09651 372 aaKnown RBP eCLIP7.48□□□□□ -1.21
CDKL5-204ENST00000623364 TGFB3P10600 412 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 UBA1P22314 1058 aaKnown RBP7.48□□□□□ -1.21
CDKL5-204ENST00000623364 MCCP23508 829 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 ACTN2P35609 894 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 VAC14Q08AM6 782 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 CCINQ13939 588 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 SMAD1Q15797 465 aaKnown RBP7.48□□□□□ -1.21
CDKL5-204ENST00000623364 GRIK4Q16099 956 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 CLLU1OSQ5K130 101 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 AXDND1Q5T1B0 1012 aaPredicted RBP7.48□□□□□ -1.21
CDKL5-204ENST00000623364 SYDE2Q5VT97 1194 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 RCSD1Q6JBY9 416 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 KCTD1Q719H9 257 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 PALB2Q86YC2 1186 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 SPNS2Q8IVW8 549 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 SPRYD3Q8NCJ5 442 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 BOD1L1Q8NFC6 3051 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 CEP76Q8TAP6 659 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 SPATA20Q8TB22 786 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 HELQQ8TDG4 1101 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 ING5Q8WYH8 240 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 MARVELD3Q96A59 401 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 CHMP4CQ96CF2 233 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 MCRS1Q96EZ8 462 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 DDRGK1Q96HY6 314 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 HHIPQ96QV1 700 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 RMDN3Q96TC7 470 aa7.48□□□□□ -1.21
CDKL5-204ENST00000623364 RANBP17Q9H2T7 1088 aaKnown RBP7.48□□□□□ -1.21
CDKL5-204ENST00000623364 EBF1Q9UH73 591 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms