RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 SPATA6Q9NWH7 488 aaPredicted RBP6.22□□□□□ -1.41
CPNE3-213ENST00000622183 L1RE1Q9UN81 338 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 FAM50BQ9Y247 325 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 PCDHB1Q9Y5F3 818 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 PCDHA13Q9Y5I0 950 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 IRAK3Q9Y616 596 aa6.22□□□□□ -1.41
CPNE3-213ENST00000622183 PMM2O15305 246 aa6.21□□□□□ -1.42
CPNE3-213ENST00000622183 DAPK3O43293 454 aa6.21□□□□□ -1.42
CPNE3-213ENST00000622183 GLDCP23378 1020 aa6.21□□□□□ -1.42
CPNE3-213ENST00000622183 MAP2K6P52564 334 aa6.21□□□□□ -1.42
CPNE3-213ENST00000622183 WNT3AP56704 352 aa6.21□□□□□ -1.42
CPNE3-213ENST00000622183 DLX2Q07687 328 aaPredicted RBP6.21□□□□□ -1.42
CPNE3-213ENST00000622183 VPS72Q15906 364 aa6.21□□□□□ -1.42
CPNE3-213ENST00000622183 ZNF827Q17R98 1081 aa6.21□□□□□ -1.42
CPNE3-213ENST00000622183 NPNTQ6UXI9 565 aa6.21□□□□□ -1.42
CPNE3-213ENST00000622183 ABHD15Q6UXT9 468 aa6.21□□□□□ -1.42
CPNE3-213ENST00000622183 CCDC149Q6ZUS6 474 aa6.21□□□□□ -1.42
CPNE3-213ENST00000622183 Q6ZVL8 140 aa6.21□□□□□ -1.42
CPNE3-213ENST00000622183 REXO1L1PQ8IX06 675 aa6.21□□□□□ -1.42
CPNE3-213ENST00000622183 RHOT1Q8IXI2 618 aa6.21□□□□□ -1.42
CPNE3-213ENST00000622183 DRC7Q8IY82 874 aa6.21□□□□□ -1.42
CPNE3-213ENST00000622183 CDK5RAP3Q96JB5 506 aa6.21□□□□□ -1.42
CPNE3-213ENST00000622183 UIMC1Q96RL1 719 aa6.21□□□□□ -1.42
CPNE3-213ENST00000622183 L2HGDHQ9H9P8 463 aa6.21□□□□□ -1.42
CPNE3-213ENST00000622183 STXBP5LQ9Y2K9 1186 aa6.21□□□□□ -1.42
CPNE3-213ENST00000622183 LOC102724159A0A0B4J2E5 919 aa6.2□□□□□ -1.42
CPNE3-213ENST00000622183 EIF3JO75822 258 aaKnown RBP6.2□□□□□ -1.42
CPNE3-213ENST00000622183 FTLP02792 175 aaPredicted RBP6.2□□□□□ -1.42
CPNE3-213ENST00000622183 ADSLP30566 484 aaPredicted RBP6.2□□□□□ -1.42
CPNE3-213ENST00000622183 SLC6A9P48067 706 aa6.2□□□□□ -1.42
CPNE3-213ENST00000622183 ZNF280AP59817 542 aaPredicted RBP6.2□□□□□ -1.42
CPNE3-213ENST00000622183 CDC42EP1Q00587 391 aa6.2□□□□□ -1.42
CPNE3-213ENST00000622183 SEMA5AQ13591 1074 aa6.2□□□□□ -1.42
CPNE3-213ENST00000622183 PWP2Q15269 919 aaKnown RBP6.2□□□□□ -1.42
CPNE3-213ENST00000622183 KIAA0753Q2KHM9 967 aa6.2□□□□□ -1.42
CPNE3-213ENST00000622183 Q6ZUG5 572 aa6.2□□□□□ -1.42
CPNE3-213ENST00000622183 LARP4Q71RC2 724 aaKnown RBP eCLIP6.2□□□□□ -1.42
CPNE3-213ENST00000622183 DAAM2Q86T65 1068 aa6.2□□□□□ -1.42
CPNE3-213ENST00000622183 SAPCD2Q86UD0 394 aa6.2□□□□□ -1.42
CPNE3-213ENST00000622183 EXOC8Q8IYI6 725 aa6.2□□□□□ -1.42
CPNE3-213ENST00000622183 RTKN2Q8IZC4 609 aa6.2□□□□□ -1.42
CPNE3-213ENST00000622183 KLHDC4Q8TBB5 520 aa6.2□□□□□ -1.42
CPNE3-213ENST00000622183 ZNF480Q8WV37 535 aa6.2□□□□□ -1.42
CPNE3-213ENST00000622183 CYFIP2Q96F07 1278 aa6.2□□□□□ -1.42
CPNE3-213ENST00000622183 YTHDC1Q96MU7 727 aaKnown RBP6.2□□□□□ -1.42
CPNE3-213ENST00000622183 PTPN18Q99952 460 aa6.2□□□□□ -1.42
CPNE3-213ENST00000622183 MANSC1Q9H8J5 431 aa6.2□□□□□ -1.42
CPNE3-213ENST00000622183 BCO1Q9HAY6 547 aa6.2□□□□□ -1.42
CPNE3-213ENST00000622183 EPB41L4AQ9HCS5 686 aaPredicted RBP6.2□□□□□ -1.42
CPNE3-213ENST00000622183 TDP1Q9NUW8 608 aa6.2□□□□□ -1.42
CPNE3-213ENST00000622183 SIK3Q9Y2K2 1263 aa6.2□□□□□ -1.42
CPNE3-213ENST00000622183 CAPN8A6NHC0 703 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 ETV2O00321 342 aaPredicted RBP6.19□□□□□ -1.42
CPNE3-213ENST00000622183 GOLIM4O00461 696 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 DDX3XO00571 662 aaKnown RBP eCLIP6.19□□□□□ -1.42
CPNE3-213ENST00000622183 ALDH1A2O94788 518 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 SLC5A1P13866 664 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 MEOX1P50221 254 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 HK3P52790 923 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 CACNB3P54284 484 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 GJA9P57773 515 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 CAP1Q01518 475 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 PCOLCEQ15113 449 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 CNKSR3Q6P9H4 555 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 DARS2Q6PI48 645 aaKnown RBP6.19□□□□□ -1.42
CPNE3-213ENST00000622183 SMC5Q8IY18 1101 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 MSL3Q8N5Y2 521 aaKnown RBP6.19□□□□□ -1.42
CPNE3-213ENST00000622183 OR7D4Q8NG98 312 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 LPPQ93052 612 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 AJUBAQ96IF1 538 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 PWWP2AQ96N64 755 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 SAMD11Q96NU1 681 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 STRBPQ96SI9 672 aaKnown RBP6.19□□□□□ -1.42
CPNE3-213ENST00000622183 CARD11Q9BXL7 1154 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 C14orf93Q9H972 538 aaKnown RBP6.19□□□□□ -1.42
CPNE3-213ENST00000622183 TLR9Q9NR96 1032 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 NTMQ9P121 344 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 PHTF1Q9UMS5 762 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 POLHQ9Y253 713 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 CTDP1Q9Y5B0 961 aaPredicted RBP6.19□□□□□ -1.42
CPNE3-213ENST00000622183 NR2E3Q9Y5X4 410 aa6.19□□□□□ -1.42
CPNE3-213ENST00000622183 A0A088AWK7 358 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 C2orf78A6NCI8 922 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 LDHAP00338 332 aaKnown RBP6.18□□□□□ -1.42
CPNE3-213ENST00000622183 GASTP01350 101 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 MED14OSP0DP75 135 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 HTR3AP46098 478 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 MRE11P49959 708 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 TARDBPQ13148 414 aaKnown RBP eCLIP6.18□□□□□ -1.42
CPNE3-213ENST00000622183 NOGQ13253 232 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 ADAM15Q13444 863 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 MORC3Q14149 939 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 SSPNQ14714 243 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 RAB39AQ14964 217 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 VWA3BQ502W6 1294 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 CERS3Q8IU89 383 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 PLA2G15Q8NCC3 412 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 MRGPRX4Q96LA9 322 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 DMRTA2Q96SC8 542 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 ELAC2Q9BQ52 826 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms