RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 TBC1D13Q9NVG8 400 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 RTEL1Q9NZ71 1219 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 IL17BQ9UHF5 180 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 NDRG2Q9UN36 371 aaKnown RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 GINS2Q9Y248 185 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 PIAS3Q9Y6X2 628 aa2.72□□□□□ -1.97
CPNE3-211ENST00000621526 TEP1Q99973 2627 aaKnown RBP2.72□□□□□ -1.97
CPNE3-211ENST00000621526 FRMPD4Q14CM0 1322 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 TANC1Q9C0D5 1861 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 F5P12259 2224 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 SPAARA0A1B0GVQ0 90 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 MYBPHLA2RUH7 354 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 TRABD2BA6NFA1 517 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 ERVH48-1M5A8F1 160 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 ARNTLO00327 626 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 PIK3CDO00329 1044 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 ZNF263O14978 683 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 ZBTB5O15062 677 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 CHADO15335 359 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 DDHD2O94830 711 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 CHGBP05060 677 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 SPATA31D3P0C874 917 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 GOLGA8HP0CJ92 632 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 GP1BBP13224 206 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 C6P13671 934 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 DARSP14868 501 aaKnown RBP2.71□□□□□ -1.98
CPNE3-211ENST00000621526 KCNA2P16389 499 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 PTPN2P17706 415 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 NCLP19338 710 aaKnown RBP2.71□□□□□ -1.98
CPNE3-211ENST00000621526 MARK3P27448 753 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 HOXA13P31271 388 aaPredicted RBP2.71□□□□□ -1.98
CPNE3-211ENST00000621526 HOXD12P35452 270 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 ABCG1P45844 678 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 GLUD2P49448 558 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 RAB27AP51159 221 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 NLRP11P59045 1033 aaKnown RBP2.71□□□□□ -1.98
CPNE3-211ENST00000621526 CREB5Q02930 508 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 SPIRE1Q08AE8 756 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 CCINQ13939 588 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 PTPAQ15257 358 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 KIZQ2M2Z5 673 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 UAP1L1Q3KQV9 507 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 KRTAP21-3Q3LHN1 58 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 CCDC184Q52MB2 194 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 USP39Q53GS9 565 aaKnown RBP2.71□□□□□ -1.98
CPNE3-211ENST00000621526 PPM1LQ5SGD2 360 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 TCEAL6Q6IPX3 200 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 KIAA1211LQ6NV74 962 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 XKR5Q6UX68 686 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 LRRC69Q6ZNQ3 347 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 SPATA31D4Q6ZUB0 917 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 TOGARAM2Q6ZUX3 1019 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 TAS1R1Q7RTX1 841 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 GPR155Q7Z3F1 870 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 FCHSD1Q86WN1 690 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 TEX2Q8IWB9 1127 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 NPAS3Q8IXF0 933 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 GALNT15Q8N3T1 639 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 PDCD7Q8N8D1 485 aaKnown RBP2.71□□□□□ -1.98
CPNE3-211ENST00000621526 CNNM3Q8NE01 707 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 IL31RAQ8NI17 732 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 CCDC26Q8TAB7 109 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 CEP76Q8TAP6 659 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 ITFG1Q8TB96 612 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 BCL7CQ8WUZ0 217 aaPredicted RBP2.71□□□□□ -1.98
CPNE3-211ENST00000621526 TCEAL3Q969E4 200 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 ZBTB10Q96DT7 871 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 MCRS1Q96EZ8 462 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 FAM193BQ96PV7 902 aaPredicted RBP2.71□□□□□ -1.98
CPNE3-211ENST00000621526 OSMRQ99650 979 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 KXD1Q9BQD3 176 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 HERC2P3Q9BVR0 1158 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 COLEC11Q9BWP8 271 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 NUSAP1Q9BXS6 441 aaKnown RBP2.71□□□□□ -1.98
CPNE3-211ENST00000621526 LRRCC1Q9C099 1032 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 SMOC1Q9H4F8 434 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 VAT1LQ9HCJ6 419 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 IL1RAPL2Q9NP60 686 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 POLMQ9NP87 494 aaPredicted RBP2.71□□□□□ -1.98
CPNE3-211ENST00000621526 DNMT3BQ9UBC3 853 aaKnown RBP2.71□□□□□ -1.98
CPNE3-211ENST00000621526 DNAJB4Q9UDY4 337 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 DAXXQ9UER7 740 aaPredicted RBP2.71□□□□□ -1.98
CPNE3-211ENST00000621526 SLC8A2Q9UPR5 921 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 MTMR7Q9Y216 660 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 APOBEC2Q9Y235 224 aaKnown RBP2.71□□□□□ -1.98
CPNE3-211ENST00000621526 MRPS23Q9Y3D9 190 aaKnown RBP2.71□□□□□ -1.98
CPNE3-211ENST00000621526 TELO2Q9Y4R8 837 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 SPTAN1Q13813 2472 aaKnown RBP2.71□□□□□ -1.98
CPNE3-211ENST00000621526 COL1A2P08123 1366 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 WDFY3Q8IZQ1 3526 aa2.71□□□□□ -1.98
CPNE3-211ENST00000621526 NFASCO94856 1347 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 CNTNAP2Q9UHC6 1331 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 CREBBPQ92793 2442 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP2.7□□□□□ -1.98
CPNE3-211ENST00000621526 PNMA6FA0A0J9YX94 578 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 KLRF2D3W0D1 207 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 TRDMT1O14717 391 aaKnown RBP2.7□□□□□ -1.98
CPNE3-211ENST00000621526 TNFRSF10BO14763 440 aa2.7□□□□□ -1.98
CPNE3-211ENST00000621526 RRP8O43159 456 aaKnown RBP2.7□□□□□ -1.98
CPNE3-211ENST00000621526 EXTL3O43909 919 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms