RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 FAM178BQ8IXR5 827 aa15.75■□□□□ 0.11
CBWD3-217ENST00000621474 CEP57L1Q8IYX8 460 aa15.75■□□□□ 0.11
CBWD3-217ENST00000621474 HPS3Q969F9 1004 aa15.75■□□□□ 0.11
CBWD3-217ENST00000621474 TIFAQ96CG3 184 aa15.75■□□□□ 0.11
CBWD3-217ENST00000621474 ZBED2Q9BTP6 218 aa15.75■□□□□ 0.11
CBWD3-217ENST00000621474 NKX2-4Q9H2Z4 354 aa15.75■□□□□ 0.11
CBWD3-217ENST00000621474 ST6GALNAC4Q9H4F1 302 aa15.75■□□□□ 0.11
CBWD3-217ENST00000621474 PTPRHQ9HD43 1115 aa15.75■□□□□ 0.11
CBWD3-217ENST00000621474 PANK4Q9NVE7 773 aa15.75■□□□□ 0.11
CBWD3-217ENST00000621474 SEL1LQ9UBV2 794 aa15.75■□□□□ 0.11
CBWD3-217ENST00000621474 USP25Q9UHP3 1055 aa15.75■□□□□ 0.11
CBWD3-217ENST00000621474 KCNG1Q9UIX4 513 aa15.75■□□□□ 0.11
CBWD3-217ENST00000621474 HES2Q9Y543 173 aa15.75■□□□□ 0.11
CBWD3-217ENST00000621474 PCDHB7Q9Y5E2 793 aa15.75■□□□□ 0.11
CBWD3-217ENST00000621474 KLRC4O43908 158 aa15.74■□□□□ 0.11
CBWD3-217ENST00000621474 PRR29P0C7W0 189 aa15.74■□□□□ 0.11
CBWD3-217ENST00000621474 PROZP22891 400 aa15.74■□□□□ 0.11
CBWD3-217ENST00000621474 RAB27AP51159 221 aa15.74■□□□□ 0.11
CBWD3-217ENST00000621474 AMPD3Q01432 767 aa15.74■□□□□ 0.11
CBWD3-217ENST00000621474 SLC27A1Q6PCB7 646 aa15.74■□□□□ 0.11
CBWD3-217ENST00000621474 AGMOQ6ZNB7 445 aa15.74■□□□□ 0.11
CBWD3-217ENST00000621474 MRPL10Q7Z7H8 261 aaKnown RBP15.74■□□□□ 0.11
CBWD3-217ENST00000621474 GLIS3Q8NEA6 775 aa15.74■□□□□ 0.11
CBWD3-217ENST00000621474 LPPQ93052 612 aa15.74■□□□□ 0.11
CBWD3-217ENST00000621474 CCDC51Q96ER9 411 aa15.74■□□□□ 0.11
CBWD3-217ENST00000621474 YME1L1Q96TA2 773 aa15.74■□□□□ 0.11
CBWD3-217ENST00000621474 ACO2Q99798 780 aaKnown RBP15.74■□□□□ 0.11
CBWD3-217ENST00000621474 TARS2Q9BW92 718 aaKnown RBP15.74■□□□□ 0.11
CBWD3-217ENST00000621474 LRRC27Q9C0I9 530 aa15.74■□□□□ 0.11
CBWD3-217ENST00000621474 RNF39Q9H2S5 420 aa15.74■□□□□ 0.11
CBWD3-217ENST00000621474 TBC1D7Q9P0N9 293 aa15.74■□□□□ 0.11
CBWD3-217ENST00000621474 TBX20Q9UMR3 447 aa15.74■□□□□ 0.11
CBWD3-217ENST00000621474 IPPQ9Y573 584 aa15.74■□□□□ 0.11
CBWD3-217ENST00000621474 LINC01553A4QN01 128 aa15.73■□□□□ 0.11
CBWD3-217ENST00000621474 GOLGA6L4A6NEF3 574 aa15.73■□□□□ 0.11
CBWD3-217ENST00000621474 NR1I2O75469 434 aa15.73■□□□□ 0.11
CBWD3-217ENST00000621474 EOMESO95936 686 aa15.73■□□□□ 0.11
CBWD3-217ENST00000621474 STAG3L1P0CL83 205 aa15.73■□□□□ 0.11
CBWD3-217ENST00000621474 GAP43P17677 238 aa15.73■□□□□ 0.11
CBWD3-217ENST00000621474 ASIC1P78348 528 aa15.73■□□□□ 0.11
CBWD3-217ENST00000621474 FAM160A1Q05DH4 1040 aa15.73■□□□□ 0.11
CBWD3-217ENST00000621474 KCNA1Q09470 495 aa15.73■□□□□ 0.11
CBWD3-217ENST00000621474 CSPP1Q1MSJ5 1256 aa15.73■□□□□ 0.11
CBWD3-217ENST00000621474 HERC4Q5GLZ8 1057 aaPredicted RBP15.73■□□□□ 0.11
CBWD3-217ENST00000621474 ATF7IP2Q5U623 682 aa15.73■□□□□ 0.11
CBWD3-217ENST00000621474 GPR153Q6NV75 609 aa15.73■□□□□ 0.11
CBWD3-217ENST00000621474 IKZF4Q9H2S9 585 aa15.73■□□□□ 0.11
CBWD3-217ENST00000621474 NXF3Q9H4D5 531 aaKnown RBP15.73■□□□□ 0.11
CBWD3-217ENST00000621474 HCSTQ9UBK5 93 aa15.73■□□□□ 0.11
CBWD3-217ENST00000621474 MSRAQ9UJ68 235 aa15.73■□□□□ 0.11
CBWD3-217ENST00000621474 TNFSF13BQ9Y275 285 aa15.73■□□□□ 0.11
CBWD3-217ENST00000621474 TRANK1O15050 2925 aa15.73■□□□□ 0.11
CBWD3-217ENST00000621474 TDRD15B5MCY1 1934 aaKnown RBP15.73■□□□□ 0.11
CBWD3-217ENST00000621474 CITO14578 2027 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 NPTXRO95502 500 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 MYBP10242 640 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 AFF1P51825 1210 aaKnown RBP15.72■□□□□ 0.11
CBWD3-217ENST00000621474 TAP1Q03518 808 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 SLC39A4Q6P5W5 647 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 UNC13DQ70J99 1090 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 MAP4K3Q8IVH8 894 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 RNF169Q8NCN4 708 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 CNNM3Q8NE01 707 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 CASD1Q96PB1 797 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 MRPL4Q9BYD3 311 aaKnown RBP15.72■□□□□ 0.11
CBWD3-217ENST00000621474 HAPLN2Q9GZV7 340 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 MRPL44Q9H9J2 332 aaKnown RBP15.72■□□□□ 0.11
CBWD3-217ENST00000621474 LRFN2Q9ULH4 789 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 COL4A4P53420 1690 aaPredicted RBP15.72■□□□□ 0.11
CBWD3-217ENST00000621474 COL6A3P12111 3177 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 H0YCG3 227 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 N4BP3O15049 544 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 PIGRP01833 764 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 NCBP1Q09161 790 aaKnown RBP15.72■□□□□ 0.11
CBWD3-217ENST00000621474 DPYDQ12882 1025 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 Q7L0L9 218 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 CCDC65Q8IXS2 484 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 ZBTB45Q96K62 511 aaPredicted RBP15.72■□□□□ 0.11
CBWD3-217ENST00000621474 ZNF576Q9H609 170 aa15.72■□□□□ 0.11
CBWD3-217ENST00000621474 REV3LO60673 3130 aa15.71■□□□□ 0.11
CBWD3-217ENST00000621474 TMEM265A0A087WTH1 108 aa15.71■□□□□ 0.11
CBWD3-217ENST00000621474 PVALEFA0A1B0GWK0 134 aa15.71■□□□□ 0.11
CBWD3-217ENST00000621474 GTPBP6O43824 516 aaPredicted RBP15.71■□□□□ 0.11
CBWD3-217ENST00000621474 MYL1P05976 194 aa15.71■□□□□ 0.11
CBWD3-217ENST00000621474 SKIP12755 728 aa15.71■□□□□ 0.11
CBWD3-217ENST00000621474 SCP2P22307 547 aa15.71■□□□□ 0.11
CBWD3-217ENST00000621474 STRN3Q13033 797 aa15.71■□□□□ 0.11
CBWD3-217ENST00000621474 PAN2Q504Q3 1202 aaKnown RBP15.71■□□□□ 0.11
CBWD3-217ENST00000621474 PPP2R2DQ66LE6 453 aa15.71■□□□□ 0.11
CBWD3-217ENST00000621474 ZPBP2Q6X784 338 aa15.71■□□□□ 0.11
CBWD3-217ENST00000621474 LRRC55Q6ZSA7 311 aa15.71■□□□□ 0.11
CBWD3-217ENST00000621474 CMTR2Q8IYT2 770 aaKnown RBP15.71■□□□□ 0.11
CBWD3-217ENST00000621474 CEP120Q8N960 986 aa15.71■□□□□ 0.11
CBWD3-217ENST00000621474 SLC17A8Q8NDX2 589 aa15.71■□□□□ 0.11
CBWD3-217ENST00000621474 HELQQ8TDG4 1101 aa15.71■□□□□ 0.11
CBWD3-217ENST00000621474 CLP1Q92989 425 aaKnown RBP15.71■□□□□ 0.11
CBWD3-217ENST00000621474 CDT1Q9H211 546 aa15.71■□□□□ 0.11
CBWD3-217ENST00000621474 SLC28A3Q9HAS3 691 aa15.71■□□□□ 0.11
CBWD3-217ENST00000621474 MRPL42Q9Y6G3 142 aaKnown RBP15.71■□□□□ 0.11
CBWD3-217ENST00000621474 ATG2AQ2TAZ0 1938 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms