RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 RMDN1Q96DB5 314 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 PBKQ96KB5 322 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 PLA2G12BQ9BX93 195 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 TRIM54Q9BYV2 358 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 WDR19Q8NEZ3 1342 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 C17orf102A2RUQ5 167 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 NECTIN1Q15223 517 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 TRIP13Q15645 432 aaPredicted RBP10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 SPHKAPQ2M3C7 1700 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 MGAT5BQ3V5L5 792 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 CCDC38Q502W7 563 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 ENOX1Q8TC92 643 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 ZBTB18Q99592 522 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 TIPINQ9BVW5 301 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 ATP11BQ9Y2G3 1177 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 HIP1RO75146 1068 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 CD4P01730 458 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 HSD17B4P51659 736 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 COASYQ13057 564 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 ITPK1Q13572 414 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 TCP11X2Q5H9J9 407 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 PPP4R4Q6NUP7 873 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 DCUN1D1Q96GG9 259 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 DRC3Q9H069 523 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 AGAP1Q9UPQ3 857 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 MORC2Q9Y6X9 1032 aaPredicted RBP10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 H3BRJ5 948 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 MGEA5O60502 916 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 DNAJC6O75061 913 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 SUPT20HL2P0C7V6 817 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 SKIP12755 728 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 THPOP40225 353 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 ATN1P54259 1190 aaPredicted RBP10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 FOXO4P98177 505 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 ZNF543Q08ER8 600 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 TMEM132BQ14DG7 1078 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 SNCBQ16143 134 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 CENPUQ71F23 418 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 TAS2R42Q7RTR8 314 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 COL23A1Q86Y22 540 aaPredicted RBP10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 CENPKQ9BS16 269 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 ZDHHC9Q9Y397 364 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 SNX9Q9Y5X1 595 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 USP31Q70CQ4 1352 aa10.42□□□□□ -0.74
CLTCL1-211ENST00000621271 LRRIQ1Q96JM4 1722 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 ZRANB2O95218 330 aaKnown RBP eCLIP10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 TDP2O95551 362 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 FTCDO95954 541 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 WDR72Q3MJ13 1102 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 FAM102AQ5T9C2 384 aaPredicted RBP10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 PYROXD1Q8WU10 500 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 YME1L1Q96TA2 773 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 HINFPQ9BQA5 517 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 TUFT1Q9NNX1 390 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 PRR12Q9ULL5 1215 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 NR2E3Q9Y5X4 410 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 SYNGAP1Q96PV0 1343 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 HBP1O60381 514 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 LCP1P13796 627 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 TBCCQ15814 346 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 MEI1Q5TIA1 1274 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 ENOSF1Q7L5Y1 443 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 TBC1D19Q8N5T2 526 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 PDZD8Q8NEN9 1154 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 TMEM143Q96AN5 459 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 SRPK1Q96SB4 655 aaKnown RBP10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 LY9Q9HBG7 655 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 ADAMTS1Q9UHI8 967 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 MYO1CO00159 1063 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 HOXA2O43364 376 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 TOM1L1O75674 476 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 RFC5P40937 340 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 EPHB4P54760 987 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 PRAMEP78395 509 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 TMEM132DQ14C87 1099 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 NAALADL2Q58DX5 795 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 PHLDB3Q6NSJ2 640 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 RNF10Q8N5U6 811 aaKnown RBP10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 ATG4CQ96DT6 458 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 EPAS1Q99814 870 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 PCSK1P29120 753 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 GCKP35557 465 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 MMP14P50281 582 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 TMED2Q15363 201 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 COLEC11Q9BWP8 271 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 ENTPD7Q9NQZ7 604 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 PCSK1NQ9UHG2 260 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 CLTCL1P53675 1640 aa10.41□□□□□ -0.74
CLTCL1-211ENST00000621271 ZNF197O14709 1029 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 MAFGO15525 162 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 CASP8Q14790 479 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 ARID5BQ14865 1188 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 HP1BP3Q5SSJ5 553 aaPredicted RBP10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 HEATR6Q6AI08 1181 aaKnown RBP10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 CFAP61Q8NHU2 1237 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 EGFL8Q99944 293 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 DHX35Q9H5Z1 703 aaKnown RBP10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 NHEJ1Q9H9Q4 299 aaPredicted RBP10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 STARD7Q9NQZ5 370 aa10.4□□□□□ -0.74
CLTCL1-211ENST00000621271 CYP26B1Q9NR63 512 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms