RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 ENDOD1O94919 500 aa4.62□□□□□ -1.67
MALAT1-216ENST00000620465 GASTP01350 101 aa4.62□□□□□ -1.67
MALAT1-216ENST00000620465 INHBBP09529 407 aa4.62□□□□□ -1.67
MALAT1-216ENST00000620465 GSPT1P15170 499 aaKnown RBP4.62□□□□□ -1.67
MALAT1-216ENST00000620465 WASP42768 502 aa4.62□□□□□ -1.67
MALAT1-216ENST00000620465 NOMO1Q15155 1222 aa4.62□□□□□ -1.67
MALAT1-216ENST00000620465 UAP1L1Q3KQV9 507 aa4.62□□□□□ -1.67
MALAT1-216ENST00000620465 ZFYVE27Q5T4F4 411 aa4.62□□□□□ -1.67
MALAT1-216ENST00000620465 ABHD15Q6UXT9 468 aa4.62□□□□□ -1.67
MALAT1-216ENST00000620465 CHPFQ8IZ52 775 aa4.62□□□□□ -1.67
MALAT1-216ENST00000620465 NRG4Q8WWG1 115 aa4.62□□□□□ -1.67
MALAT1-216ENST00000620465 HOXB13Q92826 284 aaPredicted RBP4.62□□□□□ -1.67
MALAT1-216ENST00000620465 GPHA2Q96T91 129 aa4.62□□□□□ -1.67
MALAT1-216ENST00000620465 IL23AQ9NPF7 189 aa4.62□□□□□ -1.67
MALAT1-216ENST00000620465 GPRC5DQ9NZD1 345 aa4.62□□□□□ -1.67
MALAT1-216ENST00000620465 NCDNQ9UBB6 729 aa4.62□□□□□ -1.67
MALAT1-216ENST00000620465 SERPINB13Q9UIV8 391 aa4.62□□□□□ -1.67
MALAT1-216ENST00000620465 RCAN3Q9UKA8 241 aa4.62□□□□□ -1.67
MALAT1-216ENST00000620465 ITGA10O75578 1167 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 PARNO95453 639 aaKnown RBP4.61□□□□□ -1.67
MALAT1-216ENST00000620465 U2AF1L5P0DN76 240 aaPredicted RBP4.61□□□□□ -1.67
MALAT1-216ENST00000620465 ADSLP30566 484 aaPredicted RBP4.61□□□□□ -1.67
MALAT1-216ENST00000620465 CRHR1P34998 444 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 RPS19P39019 145 aaKnown RBP4.61□□□□□ -1.67
MALAT1-216ENST00000620465 NPEPPSP55786 919 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 U2AF1Q01081 240 aaKnown RBP eCLIP4.61□□□□□ -1.671e-323■■□□□ 11.8
MALAT1-216ENST00000620465 SAFB2Q14151 953 aaKnown RBP eCLIP4.61□□□□□ -1.67
MALAT1-216ENST00000620465 ACAP1Q15027 740 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 LRRC41Q15345 812 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 RRP12Q5JTH9 1297 aaKnown RBP4.61□□□□□ -1.67
MALAT1-216ENST00000620465 FAM102BQ5T8I3 360 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 SPOCD1Q6ZMY3 1216 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 KRTAP19-1Q8IUB9 90 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 CMTM4Q8IZR5 234 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 HDAC10Q969S8 669 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 COA7Q96BR5 231 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 C7orf25Q9BPX7 421 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 PLA2G12BQ9BX93 195 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 NELFAQ9H3P2 528 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 MANSC1Q9H8J5 431 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 BCO1Q9HAY6 547 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 RTEL1Q9NZ71 1219 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 TRPS1Q9UHF7 1281 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 INTUQ9ULD6 942 aa4.61□□□□□ -1.67
MALAT1-216ENST00000620465 NPEPPSL1A6NEC2 478 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 CCDC154A6NI56 674 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 HTRA2O43464 458 aaPredicted RBP4.6□□□□□ -1.67
MALAT1-216ENST00000620465 PRICKLE3O43900 615 aaPredicted RBP4.6□□□□□ -1.67
MALAT1-216ENST00000620465 AKAP5P24588 427 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 CYP2C19P33261 490 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 TBC1D10BQ4KMP7 808 aaPredicted RBP4.6□□□□□ -1.67
MALAT1-216ENST00000620465 NXNQ6DKJ4 435 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 CXorf57Q6NSI4 855 aaKnown RBP4.6□□□□□ -1.67
MALAT1-216ENST00000620465 Q6ZVL8 140 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 ADGRE4PQ86SQ3 457 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 TAX1BP1Q86VP1 789 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 CIR1Q86X95 450 aaPredicted RBP4.6□□□□□ -1.67
MALAT1-216ENST00000620465 FMNL3Q8IVF7 1028 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 GPR135Q8IZ08 494 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 GIMAP8Q8ND71 665 aaPredicted RBP4.6□□□□□ -1.67
MALAT1-216ENST00000620465 OR7D4Q8NG98 312 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 OR2I1PQ8NGU4 316 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.6□□□□□ -1.67
MALAT1-216ENST00000620465 DPF2Q92785 391 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 AIFM3Q96NN9 605 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 UHRF1Q96T88 793 aaPredicted RBP4.6□□□□□ -1.67
MALAT1-216ENST00000620465 CDC5LQ99459 802 aaKnown RBP4.6□□□□□ -1.67
MALAT1-216ENST00000620465 PTPN18Q99952 460 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 LANCL2Q9NS86 450 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 PPP4R1LQ9P1A2 415 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 LIMCH1Q9UPQ0 1083 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 IPPQ9Y573 584 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 CCDC180Q9P1Z9 1646 aa4.6□□□□□ -1.67
MALAT1-216ENST00000620465 UBE2QL1A1L167 161 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 ADCY6O43306 1168 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 CASRP41180 1078 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 GZMKP49863 264 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 PER3P56645 1201 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 DUSP8Q13202 625 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 SEPT2Q15019 361 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 IFIT1BQ5T764 474 aaKnown RBP4.59□□□□□ -1.67
MALAT1-216ENST00000620465 PPP4R3AQ6IN85 833 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 GLB1LQ6UWU2 654 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 PDZD4Q76G19 769 aaPredicted RBP4.59□□□□□ -1.67
MALAT1-216ENST00000620465 TPH2Q8IWU9 490 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 TCEAL8Q8IYN2 117 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 TRMT2AQ8IZ69 625 aaKnown RBP4.59□□□□□ -1.67
MALAT1-216ENST00000620465 PQLC1Q8N2U9 271 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 LILRA3Q8N6C8 439 aaPredicted RBP4.59□□□□□ -1.67
MALAT1-216ENST00000620465 OR5M3Q8NGP4 307 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 TSR2Q969E8 191 aaKnown RBP4.59□□□□□ -1.67
MALAT1-216ENST00000620465 ARL8AQ96BM9 186 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 IL17RAQ96F46 866 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 GNRHR2Q96P88 292 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 OR14A2Q96R54 314 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 TCF25Q9BQ70 676 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 AGO3Q9H9G7 860 aaKnown RBP4.59□□□□□ -1.67
MALAT1-216ENST00000620465 NMRK2Q9NPI5 230 aa4.59□□□□□ -1.67
MALAT1-216ENST00000620465 CHPF2Q9P2E5 772 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms