RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 TAAR1Q96RJ0 339 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 PACSIN1Q9BY11 444 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 ECEL1O95672 775 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 INPP5BP32019 993 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 SLMAPQ14BN4 828 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 XKR3Q5GH77 459 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 GJB7Q6PEY0 223 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 MICALL1Q8N3F8 863 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 ZNF564Q8TBZ8 553 aaPredicted RBP10.68□□□□□ -0.7
CDH23-213ENST00000619887 LRRC15Q8TF66 581 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 FAM167AQ96KS9 214 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 PAIP2Q9BPZ3 127 aaKnown RBP10.68□□□□□ -0.7
CDH23-213ENST00000619887 CARD9Q9H257 536 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 UVRAGQ9P2Y5 699 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 DMGDHQ9UI17 866 aaKnown RBP10.68□□□□□ -0.7
CDH23-213ENST00000619887 TRPC6Q9Y210 931 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 COL24A1Q17RW2 1714 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 NFIBO00712 420 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 TNNC2P02585 160 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 AARSP49588 968 aaKnown RBP eCLIP10.68□□□□□ -0.7
CDH23-213ENST00000619887 IGBP1P78318 339 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 ZRSR2Q15696 482 aaKnown RBP10.68□□□□□ -0.7
CDH23-213ENST00000619887 SEPT14Q6ZU15 432 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 CAVIN3Q969G5 261 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 SAAL1Q96ER3 474 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 POLR3FQ9H1D9 316 aaPredicted RBP10.68□□□□□ -0.7
CDH23-213ENST00000619887 ISCUQ9H1K1 167 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 TMEM8AQ9HCN3 771 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 SAMD15Q9P1V8 674 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 CNOT8Q9UFF9 292 aaKnown RBP10.68□□□□□ -0.7
CDH23-213ENST00000619887 CNOT7Q9UIV1 285 aaKnown RBP10.68□□□□□ -0.7
CDH23-213ENST00000619887 USTQ9Y2C2 406 aa10.68□□□□□ -0.7
CDH23-213ENST00000619887 ECM29Q5VYK3 1845 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 E7EVH7 732 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 TFDP1Q14186 410 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 SHROOM1Q2M3G4 852 aaPredicted RBP10.67□□□□□ -0.7
CDH23-213ENST00000619887 TTC31Q49AM3 519 aaPredicted RBP10.67□□□□□ -0.7
CDH23-213ENST00000619887 LRIG3Q6UXM1 1119 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 SLC9A9Q8IVB4 645 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 SCAF8Q9UPN6 1271 aaKnown RBP10.67□□□□□ -0.7
CDH23-213ENST00000619887 ATP8A1Q9Y2Q0 1164 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 RRP15Q9Y3B9 282 aaKnown RBP10.67□□□□□ -0.7
CDH23-213ENST00000619887 IKBKGQ9Y6K9 419 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 RAD51CO43502 376 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 MYBL1P10243 752 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 RARRES1P49788 294 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 PLTPP55058 493 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 LMNB2Q03252 620 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 SGO2Q562F6 1265 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 HGSNATQ68CP4 663 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 TRIM72Q6ZMU5 477 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 FAM213AQ9BRX8 229 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 MSTO1Q9BUK6 570 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 CNOT10Q9H9A5 744 aaKnown RBP10.67□□□□□ -0.7
CDH23-213ENST00000619887 KIAA1551Q9HCM1 1747 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 ZNF302Q9NR11 478 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 RAB20Q9NX57 234 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 SCINQ9Y6U3 715 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 PDE2AO00408 941 aaPredicted RBP10.67□□□□□ -0.7
CDH23-213ENST00000619887 ZNF263O14978 683 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 TMEM191BP0C7N4 346 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 POLR2BP30876 1174 aaKnown RBP10.67□□□□□ -0.7
CDH23-213ENST00000619887 CCT5P48643 541 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 TGFB2P61812 414 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 MUM1L1Q5H9M0 696 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 FAM47CQ5HY64 1035 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 SCYL3Q8IZE3 742 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 ATG4CQ96DT6 458 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 PDCD2LQ9BRP1 358 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 NUP85Q9BW27 656 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 DEFB129Q9H1M3 183 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 EHD2Q9NZN4 543 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 IGSF9BQ9UPX0 1349 aa10.67□□□□□ -0.7
CDH23-213ENST00000619887 WNT10BO00744 389 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 THAP12O43422 761 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 CARSP49589 748 aaKnown RBP10.66□□□□□ -0.7
CDH23-213ENST00000619887 HMGCS2P54868 508 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 NBPF9Q3BBW0 867 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 EPM2AIP1Q7L775 607 aaPredicted RBP10.66□□□□□ -0.7
CDH23-213ENST00000619887 RBM46Q8TBY0 533 aaKnown RBP10.66□□□□□ -0.7
CDH23-213ENST00000619887 FGFBP2Q9BYJ0 223 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 TBX20Q9UMR3 447 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 TNRC6CQ9HCJ0 1690 aaKnown RBP10.66□□□□□ -0.7
CDH23-213ENST00000619887 P4HA1P13674 534 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 ATF2P15336 505 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 TBXAS1P24557 533 aaPredicted RBP10.66□□□□□ -0.7
CDH23-213ENST00000619887 TNFRSF8P28908 595 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 NEDD9Q14511 834 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 AENQ8WTP8 325 aaKnown RBP10.66□□□□□ -0.7
CDH23-213ENST00000619887 TCP11Q8WWU5 503 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 PLCD4Q9BRC7 762 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 AMACRQ9UHK6 382 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 LCMT1Q9UIC8 334 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 AGTPBP1Q9UPW5 1226 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 MYH8P13535 1937 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 BUB1BO60566 1050 aaPredicted RBP10.66□□□□□ -0.7
CDH23-213ENST00000619887 NOL4O94818 638 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 VCAM1P19320 739 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 GTF2H1P32780 548 aa10.66□□□□□ -0.7
CDH23-213ENST00000619887 PLA2G4FQ68DD2 849 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms