RNA–Protein interactions for RNA: ENST00000619290.4

CYFIP1-210, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-210ENST00000619290 RNF168Q8IYW5 571 aaPredicted RBP13.82□□□□□ -0.2
CYFIP1-210ENST00000619290 CLDN23Q96B33 292 aa13.82□□□□□ -0.2
CYFIP1-210ENST00000619290 B3GALT6Q96L58 329 aa13.82□□□□□ -0.2
CYFIP1-210ENST00000619290 RWDD1Q9H446 243 aaPredicted RBP13.82□□□□□ -0.2
CYFIP1-210ENST00000619290 PRMT8Q9NR22 394 aaPredicted RBP13.82□□□□□ -0.2
CYFIP1-210ENST00000619290 DISC1Q9NRI5 854 aa13.82□□□□□ -0.2
CYFIP1-210ENST00000619290 ANGPTL2Q9UKU9 493 aa13.82□□□□□ -0.2
CYFIP1-210ENST00000619290 RAB23Q9ULC3 237 aa13.82□□□□□ -0.2
CYFIP1-210ENST00000619290 PATJQ8NI35 1801 aa13.82□□□□□ -0.2
CYFIP1-210ENST00000619290 CNTNAP2Q9UHC6 1331 aa13.82□□□□□ -0.2
CYFIP1-210ENST00000619290 F8W810 466 aa13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 hCG_1984214I3L0E3 225 aa13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 EFEMP2O95967 443 aa13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 C1RP00736 705 aa13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 TARSP26639 723 aaKnown RBP13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 PFKPQ01813 784 aa13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 TARBP2Q15633 366 aaKnown RBP13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 MTERF2Q49AM1 385 aa13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 GRASPQ7Z6J2 395 aaPredicted RBP13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 KSR1Q8IVT5 923 aa13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 COLGALT2Q8IYK4 626 aa13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 ZNF713Q8N859 430 aaPredicted RBP13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 NLRP4Q96MN2 994 aa13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 FAM126AQ9BYI3 521 aaPredicted RBP13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 LRRC2Q9BYS8 371 aa13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 AGPAT5Q9NUQ2 364 aa13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 BARHL2Q9NY43 387 aa13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 SUCLA2Q9P2R7 463 aaPredicted RBP13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 SEPT9Q9UHD8 586 aaPredicted RBP13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 V9GY48 417 aaPredicted RBP13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 MIA3Q5JRA6 1907 aa13.81□□□□□ -0.2
CYFIP1-210ENST00000619290 MYH9P35579 1960 aaKnown RBP13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 IGKV6-21A0A0C4DH24 114 aa13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 TMEM150BA6NC51 233 aa13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 NCAM2O15394 837 aa13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 CHMP2AO43633 222 aa13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 ZMYND10O75800 440 aa13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 RPL17P18621 184 aaKnown RBP13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 CHMLP26374 656 aa13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 RPS9P46781 194 aaKnown RBP13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 NTHL1P78549 312 aa13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 MTAPQ13126 283 aa13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 LAIR1Q6GTX8 287 aa13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 LILRA6Q6PI73 481 aa13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 TPRG1Q6ZUI0 275 aa13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 FGF13Q92913 245 aa13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 MAP4K1Q92918 833 aa13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 NELL2Q99435 816 aa13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 KXD1Q9BQD3 176 aa13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 SH2D3AQ9BRG2 576 aa13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 CHST7Q9NS84 486 aa13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 FAM217BQ9NTX9 383 aaPredicted RBP13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 RBM8AQ9Y5S9 174 aaKnown RBP13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 FAM208BQ5VWN6 2430 aa13.8□□□□□ -0.2
CYFIP1-210ENST00000619290 IGHDP01880 384 aa13.79□□□□□ -0.2
CYFIP1-210ENST00000619290 RETP07949 1114 aa13.79□□□□□ -0.2
CYFIP1-210ENST00000619290 GSPT1P15170 499 aaKnown RBP13.79□□□□□ -0.2
CYFIP1-210ENST00000619290 FUT2Q10981 343 aa13.79□□□□□ -0.2
CYFIP1-210ENST00000619290 UBXN11Q5T124 520 aa13.79□□□□□ -0.2
CYFIP1-210ENST00000619290 SYNE3Q6ZMZ3 975 aa13.79□□□□□ -0.2
CYFIP1-210ENST00000619290 PRR23BQ6ZRT6 265 aa13.79□□□□□ -0.2
CYFIP1-210ENST00000619290 CEP89Q96ST8 783 aa13.79□□□□□ -0.2
CYFIP1-210ENST00000619290 PHF20Q9BVI0 1012 aa13.79□□□□□ -0.2
CYFIP1-210ENST00000619290 NIFKQ9BYG3 293 aaKnown RBP13.79□□□□□ -0.2
CYFIP1-210ENST00000619290 SEMA4GQ9NTN9 838 aa13.79□□□□□ -0.2
CYFIP1-210ENST00000619290 RBM28Q9NW13 759 aaKnown RBP13.79□□□□□ -0.2
CYFIP1-210ENST00000619290 FNIP2Q9P278 1114 aa13.79□□□□□ -0.2
CYFIP1-210ENST00000619290 ADAMTS3O15072 1205 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 SGSM2O43147 1006 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 GDF9O60383 454 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 LRP3O75074 770 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 NR1I2O75469 434 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 NCLP19338 710 aaKnown RBP13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 SFNP31947 248 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 JAK3P52333 1124 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 NRLP54845 237 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 DSC1Q08554 894 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 FZD5Q13467 585 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 USP41Q3LFD5 358 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 XKR3Q5GH77 459 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 ZNF852Q6ZMS4 543 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 PRR23CQ6ZRP0 262 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 SGMS1Q86VZ5 419 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 CELF5Q8N6W0 485 aaKnown RBP13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 ITFG1Q8TB96 612 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 LENG9Q96B70 501 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 GPR62Q9BZJ7 368 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 UNC45AQ9H3U1 944 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 IFT122Q9HBG6 1241 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 UBN1Q9NPG3 1134 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 SH2B1Q9NRF2 756 aaPredicted RBP13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 CEP295Q9C0D2 2601 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 MYH15Q9Y2K3 1946 aa13.78□□□□□ -0.2
CYFIP1-210ENST00000619290 ARL5CA6NH57 179 aa13.77□□□□□ -0.21
CYFIP1-210ENST00000619290 MSH4O15457 936 aa13.77□□□□□ -0.21
CYFIP1-210ENST00000619290 GAS7O60861 476 aa13.77□□□□□ -0.21
CYFIP1-210ENST00000619290 MAFO75444 373 aaPredicted RBP13.77□□□□□ -0.21
CYFIP1-210ENST00000619290 TDGF1P13385 188 aa13.77□□□□□ -0.21
CYFIP1-210ENST00000619290 ITGA4P13612 1032 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms