RNA–Protein interactions for RNA: ENST00000619151.4

BRF1-221, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5 BASIC

Gene BRF1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-221ENST00000619151 MRPL4Q9BYD3 311 aaKnown RBP30.3■■■□□ 2.44
BRF1-221ENST00000619151 NKX3-2P78367 333 aa30.29■■■□□ 2.44
BRF1-221ENST00000619151 CETN1Q12798 172 aa30.29■■■□□ 2.44
BRF1-221ENST00000619151 MAPK6Q16659 721 aa30.29■■■□□ 2.44
BRF1-221ENST00000619151 E4F1Q66K89 784 aaPredicted RBP30.29■■■□□ 2.44
BRF1-221ENST00000619151 MTHFD1LQ6UB35 978 aa30.29■■■□□ 2.44
BRF1-221ENST00000619151 NFKBIZQ9BYH8 718 aa30.29■■■□□ 2.44
BRF1-221ENST00000619151 DDX20Q9UHI6 824 aaKnown RBP30.29■■■□□ 2.44
BRF1-221ENST00000619151 P4HA2O15460 535 aa30.28■■■□□ 2.44
BRF1-221ENST00000619151 LDHAP00338 332 aaKnown RBP30.28■■■□□ 2.44
BRF1-221ENST00000619151 MCCD1P59942 119 aaPredicted RBP30.28■■■□□ 2.44
BRF1-221ENST00000619151 MYL7Q01449 175 aa30.28■■■□□ 2.44
BRF1-221ENST00000619151 MEA1Q16626 185 aa30.28■■■□□ 2.44
BRF1-221ENST00000619151 LINC01465Q8N7H1 131 aa30.28■■■□□ 2.44
BRF1-221ENST00000619151 SAAL1Q96ER3 474 aa30.28■■■□□ 2.44
BRF1-221ENST00000619151 MAP7D2Q96T17 732 aa30.28■■■□□ 2.44
BRF1-221ENST00000619151 KATNAL1Q9BW62 490 aa30.28■■■□□ 2.44
BRF1-221ENST00000619151 CCDC113Q9H0I3 377 aa30.28■■■□□ 2.44
BRF1-221ENST00000619151 GCNT4Q9P109 453 aa30.28■■■□□ 2.44
BRF1-221ENST00000619151 DAAM1Q9Y4D1 1078 aa30.28■■■□□ 2.44
BRF1-221ENST00000619151 GOLGA8IPA6NC78 632 aa30.27■■■□□ 2.44
BRF1-221ENST00000619151 GOLGA8JA6NMD2 632 aa30.27■■■□□ 2.44
BRF1-221ENST00000619151 EXTL3O43909 919 aa30.27■■■□□ 2.44
BRF1-221ENST00000619151 RARBP10826 455 aa30.27■■■□□ 2.44
BRF1-221ENST00000619151 ZNF333Q96JL9 665 aa30.27■■■□□ 2.44
BRF1-221ENST00000619151 NLRP4Q96MN2 994 aa30.27■■■□□ 2.44
BRF1-221ENST00000619151 SOWAHDA6NJG2 315 aa30.27■■■□□ 2.44
BRF1-221ENST00000619151 EPHB6O15197 1021 aa30.27■■■□□ 2.44
BRF1-221ENST00000619151 PRKCBP05771 671 aa30.27■■■□□ 2.44
BRF1-221ENST00000619151 TRIM49P0CI25 452 aa30.27■■■□□ 2.44
BRF1-221ENST00000619151 TRIM49CP0CI26 452 aa30.27■■■□□ 2.44
BRF1-221ENST00000619151 PHKA2P46019 1235 aa30.27■■■□□ 2.44
BRF1-221ENST00000619151 GJA9P57773 515 aa30.27■■■□□ 2.44
BRF1-221ENST00000619151 CDK17Q00537 523 aa30.27■■■□□ 2.44
BRF1-221ENST00000619151 CBWD2Q8IUF1 395 aa30.27■■■□□ 2.44
BRF1-221ENST00000619151 TMC2Q8TDI7 906 aa30.27■■■□□ 2.44
BRF1-221ENST00000619151 LENG1Q96BZ8 264 aaPredicted RBP30.27■■■□□ 2.44
BRF1-221ENST00000619151 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.27■■■□□ 2.447e-7■■■□□ 18.6
BRF1-221ENST00000619151 UNC93B1Q9H1C4 597 aa30.27■■■□□ 2.44
BRF1-221ENST00000619151 UPF3AQ9H1J1 476 aaKnown RBP30.27■■■□□ 2.44
BRF1-221ENST00000619151 PAK6Q9NQU5 681 aaPredicted RBP30.27■■■□□ 2.44
BRF1-221ENST00000619151 AKT3Q9Y243 479 aa30.27■■■□□ 2.44
BRF1-221ENST00000619151 NRCAMQ92823 1304 aa30.26■■■□□ 2.43
BRF1-221ENST00000619151 ZNF233A6NK53 670 aa30.26■■■□□ 2.43
BRF1-221ENST00000619151 KPNA6O60684 536 aa30.26■■■□□ 2.43
BRF1-221ENST00000619151 PON1P27169 355 aa30.26■■■□□ 2.43
BRF1-221ENST00000619151 HNRNPH3P31942 346 aaKnown RBP30.26■■■□□ 2.43
BRF1-221ENST00000619151 MATR3P43243 847 aaKnown RBP eCLIP30.26■■■□□ 2.431e-8■■■■□ 25.4
BRF1-221ENST00000619151 LHX8Q68G74 356 aa30.26■■■□□ 2.43
BRF1-221ENST00000619151 PDXDC1Q6P996 788 aa30.26■■■□□ 2.43
BRF1-221ENST00000619151 MFSD14AQ96MC6 490 aa30.26■■■□□ 2.43
BRF1-221ENST00000619151 TARS2Q9BW92 718 aaKnown RBP30.26■■■□□ 2.43
BRF1-221ENST00000619151 GANQ9H2C0 597 aa30.26■■■□□ 2.43
BRF1-221ENST00000619151 FBXL5Q9UKA1 691 aa30.26■■■□□ 2.43
BRF1-221ENST00000619151 AGO2Q9UKV8 859 aaKnown RBP30.26■■■□□ 2.43
BRF1-221ENST00000619151 PLAGL2Q9UPG8 496 aa30.26■■■□□ 2.43
BRF1-221ENST00000619151 GOLGA6L9A6NEM1 432 aa30.25■■■□□ 2.43
BRF1-221ENST00000619151 NOL4O94818 638 aa30.25■■■□□ 2.43
BRF1-221ENST00000619151 ADRB2P07550 413 aa30.25■■■□□ 2.43
BRF1-221ENST00000619151 MYL3P08590 195 aa30.25■■■□□ 2.43
BRF1-221ENST00000619151 PTENP60484 403 aa30.25■■■□□ 2.43
BRF1-221ENST00000619151 POLR2FP61218 127 aaKnown RBP30.25■■■□□ 2.43
BRF1-221ENST00000619151 MFSD10Q14728 455 aa30.25■■■□□ 2.43
BRF1-221ENST00000619151 MTFR1Q15390 333 aa30.25■■■□□ 2.43
BRF1-221ENST00000619151 FSCN1Q16658 493 aaKnown RBP30.25■■■□□ 2.43
BRF1-221ENST00000619151 KIAA0753Q2KHM9 967 aa30.25■■■□□ 2.43
BRF1-221ENST00000619151 RRAGAQ7L523 313 aa30.25■■■□□ 2.43
BRF1-221ENST00000619151 BAP1Q92560 729 aa30.25■■■□□ 2.43
BRF1-221ENST00000619151 SYN2Q92777 582 aaPredicted RBP30.25■■■□□ 2.43
BRF1-221ENST00000619151 SPC25Q9HBM1 224 aa30.25■■■□□ 2.43
BRF1-221ENST00000619151 KAT6AQ92794 2004 aa30.24■■■□□ 2.43
BRF1-221ENST00000619151 PMM2O15305 246 aa30.24■■■□□ 2.43
BRF1-221ENST00000619151 CCL5P13501 91 aa30.24■■■□□ 2.43
BRF1-221ENST00000619151 PSEN2P49810 448 aa30.24■■■□□ 2.43
BRF1-221ENST00000619151 CYP24A1Q07973 514 aa30.24■■■□□ 2.43
BRF1-221ENST00000619151 MCOLN1Q9GZU1 580 aa30.24■■■□□ 2.43
BRF1-221ENST00000619151 TRMT1Q9NXH9 659 aaKnown RBP30.24■■■□□ 2.43
BRF1-221ENST00000619151 CCDC175P0C221 793 aa30.23■■■□□ 2.43
BRF1-221ENST00000619151 SMIM10L2AP0DMW4 78 aa30.23■■■□□ 2.43
BRF1-221ENST00000619151 SMIM10L2BP0DMW5 78 aa30.23■■■□□ 2.43
BRF1-221ENST00000619151 SLC9A1P19634 815 aa30.23■■■□□ 2.43
BRF1-221ENST00000619151 GTF2H1P32780 548 aa30.23■■■□□ 2.43
BRF1-221ENST00000619151 DNTTIP2Q5QJE6 756 aaKnown RBP30.23■■■□□ 2.43
BRF1-221ENST00000619151 KLHDC7AQ5VTJ3 777 aa30.23■■■□□ 2.43
BRF1-221ENST00000619151 RAD9BQ6WBX8 426 aa30.23■■■□□ 2.43
BRF1-221ENST00000619151 PDZRN4Q6ZMN7 1036 aaPredicted RBP30.23■■■□□ 2.43
BRF1-221ENST00000619151 IFNLR1Q8IU57 520 aaPredicted RBP30.23■■■□□ 2.43
BRF1-221ENST00000619151 KAT2BQ92831 832 aa30.23■■■□□ 2.43
BRF1-221ENST00000619151 PPP1R13BQ96KQ4 1090 aa30.23■■■□□ 2.43
BRF1-221ENST00000619151 FAM213AQ9BRX8 229 aa30.23■■■□□ 2.43
BRF1-221ENST00000619151 MSTO1Q9BUK6 570 aa30.23■■■□□ 2.43
BRF1-221ENST00000619151 PRMT7Q9NVM4 692 aaPredicted RBP30.23■■■□□ 2.43
BRF1-221ENST00000619151 ANKFY1Q9P2R3 1169 aa30.23■■■□□ 2.43
BRF1-221ENST00000619151 MYO6Q9UM54 1294 aa30.23■■■□□ 2.43
BRF1-221ENST00000619151 PPP2R2CQ9Y2T4 447 aa30.23■■■□□ 2.43
BRF1-221ENST00000619151 EVPLQ92817 2033 aa30.23■■■□□ 2.43
BRF1-221ENST00000619151 LRRC53A6NM62 1247 aa30.22■■■□□ 2.43
BRF1-221ENST00000619151 INO80B-WBP1J3KQ70 363 aa30.22■■■□□ 2.43
BRF1-221ENST00000619151 ACKR2O00590 384 aa30.22■■■□□ 2.43
BRF1-221ENST00000619151 TOM1L1O75674 476 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms