RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 DCAF4L1Q3SXM0 396 aa14.56□□□□□ -0.08
MDC1-209ENST00000613547 FAM26FQ5R3K3 315 aa14.56□□□□□ -0.08
MDC1-209ENST00000613547 ZNF720Q7Z2F6 126 aa14.56□□□□□ -0.08
MDC1-209ENST00000613547 TMCO2Q7Z6W1 182 aaPredicted RBP14.56□□□□□ -0.08
MDC1-209ENST00000613547 RSPH1Q8WYR4 309 aa14.56□□□□□ -0.08
MDC1-209ENST00000613547 TCHPQ9BT92 498 aa14.56□□□□□ -0.08
MDC1-209ENST00000613547 TBC1D7Q9P0N9 293 aa14.56□□□□□ -0.08
MDC1-209ENST00000613547 TNFSF13BQ9Y275 285 aa14.56□□□□□ -0.08
MDC1-209ENST00000613547 PCDHB2Q9Y5E7 798 aa14.56□□□□□ -0.08
MDC1-209ENST00000613547 RBAK-RBAKDNI3L0D1 243 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 HNRNPDLO14979 420 aaKnown RBP14.55□□□□□ -0.08
MDC1-209ENST00000613547 NR1I2O75469 434 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 DGKIO75912 1065 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 SMC2O95347 1197 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 NPTXRO95502 500 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 DNAJB2P25686 324 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 CASP1P29466 404 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 LIG4P49917 911 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 RABGGTBP53611 331 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 ZNF568Q3ZCX4 644 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 UBXN11Q5T124 520 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 GLB1LQ6UWU2 654 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 TAS1R3Q7RTX0 852 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 MAP4K3Q8IVH8 894 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 ACCSQ96QU6 501 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 FIZ1Q96SL8 496 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 ACO2Q99798 780 aaKnown RBP14.55□□□□□ -0.08
MDC1-209ENST00000613547 TARS2Q9BW92 718 aaKnown RBP14.55□□□□□ -0.08
MDC1-209ENST00000613547 PBX4Q9BYU1 374 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 PDZD7Q9H5P4 517 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 SLC28A3Q9HAS3 691 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 UBN1Q9NPG3 1134 aa14.55□□□□□ -0.08
MDC1-209ENST00000613547 RANBP2P49792 3224 aaKnown RBP14.55□□□□□ -0.08
MDC1-209ENST00000613547 TOM1L1O75674 476 aa14.54□□□□□ -0.08
MDC1-209ENST00000613547 RPN1P04843 607 aaKnown RBP14.54□□□□□ -0.08
MDC1-209ENST00000613547 ITGA4P13612 1032 aa14.54□□□□□ -0.08
MDC1-209ENST00000613547 MATR3P43243 847 aaKnown RBP eCLIP14.54□□□□□ -0.08
MDC1-209ENST00000613547 HTRA4P83105 476 aaPredicted RBP14.54□□□□□ -0.08
MDC1-209ENST00000613547 PSMD2Q13200 908 aa14.54□□□□□ -0.08
MDC1-209ENST00000613547 ZC2HC1CQ53FD0 456 aaPredicted RBP14.54□□□□□ -0.08
MDC1-209ENST00000613547 NT5DC1Q5TFE4 455 aa14.54□□□□□ -0.08
MDC1-209ENST00000613547 MRPL10Q7Z7H8 261 aaKnown RBP14.54□□□□□ -0.08
MDC1-209ENST00000613547 CDR2LQ86X02 465 aaPredicted RBP14.54□□□□□ -0.08
MDC1-209ENST00000613547 SYCP3Q8IZU3 236 aa14.54□□□□□ -0.08
MDC1-209ENST00000613547 CRIPAKQ8N1N5 446 aa14.54□□□□□ -0.08
MDC1-209ENST00000613547 TIFAQ96CG3 184 aa14.54□□□□□ -0.08
MDC1-209ENST00000613547 EIF2AQ9BY44 585 aaKnown RBP14.54□□□□□ -0.08
MDC1-209ENST00000613547 TMEM206Q9H813 350 aa14.54□□□□□ -0.08
MDC1-209ENST00000613547 ANKFY1Q9P2R3 1169 aa14.54□□□□□ -0.08
MDC1-209ENST00000613547 IPPQ9Y573 584 aa14.54□□□□□ -0.08
MDC1-209ENST00000613547 TMEM265A0A087WTH1 108 aa14.53□□□□□ -0.08
MDC1-209ENST00000613547 TTLL13PA6NNM8 815 aa14.53□□□□□ -0.08
MDC1-209ENST00000613547 EIF3DO15371 548 aaKnown RBP eCLIP14.53□□□□□ -0.08
MDC1-209ENST00000613547 CLDN3O15551 220 aa14.53□□□□□ -0.08
MDC1-209ENST00000613547 PIGRP01833 764 aa14.53□□□□□ -0.08
MDC1-209ENST00000613547 EDN1P05305 212 aa14.53□□□□□ -0.08
MDC1-209ENST00000613547 CA3P07451 260 aa14.53□□□□□ -0.08
MDC1-209ENST00000613547 MCF2P10911 925 aa14.53□□□□□ -0.08
MDC1-209ENST00000613547 FGFR1P11362 822 aa14.53□□□□□ -0.08
MDC1-209ENST00000613547 DPYDQ12882 1025 aa14.53□□□□□ -0.08
MDC1-209ENST00000613547 BTG3Q14201 252 aaPredicted RBP14.53□□□□□ -0.08
MDC1-209ENST00000613547 L1TD1Q5T7N2 865 aaKnown RBP14.53□□□□□ -0.08
MDC1-209ENST00000613547 EEF1DP3Q658K8 133 aa14.53□□□□□ -0.08
MDC1-209ENST00000613547 PPP2R2DQ66LE6 453 aa14.53□□□□□ -0.08
MDC1-209ENST00000613547 SLFN12LQ6IEE8 588 aa14.53□□□□□ -0.08
MDC1-209ENST00000613547 MPZL3Q6UWV2 235 aa14.53□□□□□ -0.08
MDC1-209ENST00000613547 ZNF598Q86UK7 904 aaKnown RBP14.53□□□□□ -0.08
MDC1-209ENST00000613547 ELOA2Q8IYF1 753 aaPredicted RBP14.53□□□□□ -0.08
MDC1-209ENST00000613547 CMTR2Q8IYT2 770 aaKnown RBP14.53□□□□□ -0.08
MDC1-209ENST00000613547 MRPL9Q9BYD2 267 aaKnown RBP14.53□□□□□ -0.08
MDC1-209ENST00000613547 TMEM117Q9H0C3 514 aa14.53□□□□□ -0.08
MDC1-209ENST00000613547 RMND1Q9NWS8 449 aa14.53□□□□□ -0.08
MDC1-209ENST00000613547 USP20Q9Y2K6 914 aa14.53□□□□□ -0.08
MDC1-209ENST00000613547 TCHHQ07283 1943 aa14.53□□□□□ -0.08
MDC1-209ENST00000613547 UBE4BO95155 1302 aa14.52□□□□□ -0.08
MDC1-209ENST00000613547 TBKBP1A7MCY6 615 aa14.52□□□□□ -0.09
MDC1-209ENST00000613547 PPP1R37O75864 691 aa14.52□□□□□ -0.09
MDC1-209ENST00000613547 KIF20AO95235 890 aa14.52□□□□□ -0.09
MDC1-209ENST00000613547 PRR29P0C7W0 189 aa14.52□□□□□ -0.09
MDC1-209ENST00000613547 MYBP10242 640 aa14.52□□□□□ -0.09
MDC1-209ENST00000613547 ATF7P17544 494 aaPredicted RBP14.52□□□□□ -0.09
MDC1-209ENST00000613547 PBX2P40425 430 aa14.52□□□□□ -0.09
MDC1-209ENST00000613547 YARSP54577 528 aaKnown RBP14.52□□□□□ -0.09
MDC1-209ENST00000613547 EHHADHQ08426 723 aa14.52□□□□□ -0.09
MDC1-209ENST00000613547 KMT5BQ4FZB7 885 aa14.52□□□□□ -0.09
MDC1-209ENST00000613547 ZBTB33Q86T24 672 aa14.52□□□□□ -0.09
MDC1-209ENST00000613547 FIBCD1Q8N539 461 aa14.52□□□□□ -0.09
MDC1-209ENST00000613547 SMG8Q8ND04 991 aaKnown RBP14.52□□□□□ -0.09
MDC1-209ENST00000613547 URGCPQ8TCY9 931 aa14.52□□□□□ -0.09
MDC1-209ENST00000613547 SP7Q8TDD2 431 aaPredicted RBP14.52□□□□□ -0.09
MDC1-209ENST00000613547 ZNF689Q96CS4 500 aaPredicted RBP14.52□□□□□ -0.09
MDC1-209ENST00000613547 CCDC94Q9BW85 323 aaPredicted RBP14.52□□□□□ -0.09
MDC1-209ENST00000613547 APOL6Q9BWW8 343 aa14.52□□□□□ -0.09
MDC1-209ENST00000613547 GTPBP4Q9BZE4 634 aaKnown RBP14.52□□□□□ -0.09
MDC1-209ENST00000613547 CDT1Q9H211 546 aa14.52□□□□□ -0.09
MDC1-209ENST00000613547 NKX2-4Q9H2Z4 354 aa14.52□□□□□ -0.09
MDC1-209ENST00000613547 NXF3Q9H4D5 531 aaKnown RBP14.52□□□□□ -0.09
MDC1-209ENST00000613547 RSAD1Q9HA92 442 aa14.52□□□□□ -0.09
MDC1-209ENST00000613547 PARP2Q9UGN5 583 aa14.52□□□□□ -0.09
MDC1-209ENST00000613547 YBX2Q9Y2T7 364 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms