RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 LRRC49Q8IUZ0 686 aa9.28□□□□□ -0.92
TTC28-208ENST00000612946 SCFD1Q8WVM8 642 aa9.28□□□□□ -0.92
TTC28-208ENST00000612946 MAGEB5Q9BZ81 275 aa9.28□□□□□ -0.92
TTC28-208ENST00000612946 A0A1W2PQJ5 194 aa9.27□□□□□ -0.92
TTC28-208ENST00000612946 CHL1O00533 1208 aa9.27□□□□□ -0.92
TTC28-208ENST00000612946 PER1O15534 1290 aaPredicted RBP9.27□□□□□ -0.92
TTC28-208ENST00000612946 FTCDO95954 541 aa9.27□□□□□ -0.92
TTC28-208ENST00000612946 RFFLQ8WZ73 363 aa9.27□□□□□ -0.92
TTC28-208ENST00000612946 RMND5BQ96G75 393 aaPredicted RBP9.27□□□□□ -0.92
TTC28-208ENST00000612946 ATP7BP35670 1465 aa9.27□□□□□ -0.92
TTC28-208ENST00000612946 ZNF518AQ6AHZ1 1483 aa9.27□□□□□ -0.92
TTC28-208ENST00000612946 MATN2O00339 956 aa9.27□□□□□ -0.92
TTC28-208ENST00000612946 ALBP02768 609 aa9.27□□□□□ -0.92
TTC28-208ENST00000612946 TNNI1P19237 187 aa9.27□□□□□ -0.92
TTC28-208ENST00000612946 PTPN4P29074 926 aa9.27□□□□□ -0.92
TTC28-208ENST00000612946 CCDC144BQ3MJ40 725 aa9.27□□□□□ -0.92
TTC28-208ENST00000612946 XAGE3Q8WTP9 111 aa9.27□□□□□ -0.92
TTC28-208ENST00000612946 DLG3Q92796 817 aa9.27□□□□□ -0.92
TTC28-208ENST00000612946 PSMA3P25788 255 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 PTPN12Q05209 780 aaKnown RBP9.27□□□□□ -0.93
TTC28-208ENST00000612946 SPANXN2Q5MJ10 180 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 UBE2OQ9C0C9 1292 aaKnown RBP9.27□□□□□ -0.93
TTC28-208ENST00000612946 CPSF1Q10570 1443 aaKnown RBP9.27□□□□□ -0.93
TTC28-208ENST00000612946 CD19P15391 556 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 FAM173BQ6P4H8 233 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 LPCAT2Q7L5N7 544 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 MICALL2Q8IY33 904 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 KCTD6Q8NC69 237 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 TADA1Q96BN2 335 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 CENPTQ96BT3 561 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 KCNF1Q9H3M0 494 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 SAR1AQ9NR31 198 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 C4orf22Q6V702 233 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 LDHBP07195 334 aaKnown RBP9.27□□□□□ -0.93
TTC28-208ENST00000612946 PLA2G4AP47712 749 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 ATN1P54259 1190 aaPredicted RBP9.27□□□□□ -0.93
TTC28-208ENST00000612946 E4F1Q66K89 784 aaPredicted RBP9.27□□□□□ -0.93
TTC28-208ENST00000612946 CEP44Q9C0F1 390 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 ZBED1O96006 694 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 KRT20P35900 424 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 SCRN3Q0VDG4 424 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 TTBK2Q6IQ55 1244 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 MPRIPQ6WCQ1 1025 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 ZNF710Q8N1W2 664 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 MINDY2Q8NBR6 621 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 HIPK4Q8NE63 616 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 SNRNP27Q8WVK2 155 aaKnown RBP9.27□□□□□ -0.93
TTC28-208ENST00000612946 ZFYVE19Q96K21 471 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 METTL22Q9BUU2 404 aaPredicted RBP9.27□□□□□ -0.93
TTC28-208ENST00000612946 DCTN4Q9UJW0 460 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 APPL1Q9UKG1 709 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 KATNA1O75449 491 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 SNAP25P60880 206 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 PSMC6P62333 389 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 SLC34A1Q06495 639 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 TTLL12Q14166 644 aaPredicted RBP9.27□□□□□ -0.93
TTC28-208ENST00000612946 TTC8Q8TAM2 541 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 HESX1Q9UBX0 185 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 RAB21Q9UL25 225 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 NFIBO00712 420 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 GAS7O60861 476 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 NFKBIAP25963 317 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 CDK17Q00537 523 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 THOC5Q13769 683 aaKnown RBP9.27□□□□□ -0.93
TTC28-208ENST00000612946 PRMT9Q6P2P2 845 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 DARS2Q6PI48 645 aaKnown RBP9.27□□□□□ -0.93
TTC28-208ENST00000612946 ENOSF1Q7L5Y1 443 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 FAM227BQ96M60 508 aa9.27□□□□□ -0.93
TTC28-208ENST00000612946 MMP1P03956 469 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 NUP62P37198 522 aaPredicted RBP9.26□□□□□ -0.93
TTC28-208ENST00000612946 LIFRP42702 1097 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 ATXN3P54252 364 aaPredicted RBP9.26□□□□□ -0.93
TTC28-208ENST00000612946 TFDP2Q14188 446 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 PKN2Q16513 984 aaKnown RBP9.26□□□□□ -0.93
TTC28-208ENST00000612946 DGUOKQ16854 277 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 LMBR1LQ6UX01 489 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 PHACTR3Q96KR7 559 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 CLIC4Q9Y696 253 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 TRPM1Q7Z4N2 1603 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 TRPC5OSA6NMA1 111 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 RXRGP48443 463 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 IFRD2Q12894 506 aaPredicted RBP9.26□□□□□ -0.93
TTC28-208ENST00000612946 UGP2Q16851 508 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 KIAA1755Q5JYT7 1200 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 MARK2Q7KZI7 788 aaKnown RBP9.26□□□□□ -0.93
TTC28-208ENST00000612946 B3GALT6Q96L58 329 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 BACH1O14867 736 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 RALBP11234 206 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 BFSP2Q13515 415 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 C1orf228Q6PIY5 440 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 FAM133AQ8N9E0 248 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 SMYD2Q9NRG4 433 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 EFR3BQ9Y2G0 817 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 DPH6Q7L8W6 267 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 OTUD7AQ8TE49 926 aaPredicted RBP9.26□□□□□ -0.93
TTC28-208ENST00000612946 SLC10A4Q96EP9 437 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 AP1M1Q9BXS5 423 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 FRMD8P1Q9BZ68 369 aaPredicted RBP9.26□□□□□ -0.93
TTC28-208ENST00000612946 GPR108Q9NPR9 543 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 CCDC59Q9P031 241 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms