RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 SREBF1P36956 1147 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 PPM1FP49593 454 aaPredicted RBP9.17□□□□□ -0.94
TMCO1-208ENST00000612311 ACOT2P49753 483 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 ARL4CP56559 192 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 PSMC1P62191 440 aaKnown RBP9.17□□□□□ -0.94
TMCO1-208ENST00000612311 SNCBQ16143 134 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 METTL23Q86XA0 190 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 COL23A1Q86Y22 540 aaPredicted RBP9.17□□□□□ -0.94
TMCO1-208ENST00000612311 RBM46Q8TBY0 533 aaKnown RBP9.17□□□□□ -0.94
TMCO1-208ENST00000612311 TMEM143Q96AN5 459 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 ACTR5Q9H9F9 607 aaPredicted RBP9.17□□□□□ -0.94
TMCO1-208ENST00000612311 PCSK1NQ9UHG2 260 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 LCMT1Q9UIC8 334 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.17□□□□□ -0.94
TMCO1-208ENST00000612311 RSPH10B2B2RC85 870 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 SMIM22K7EJ46 135 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 RSPH10BP0C881 870 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 AP3M2P53677 418 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 RPS6P62753 249 aaKnown RBP9.17□□□□□ -0.94
TMCO1-208ENST00000612311 PPP2R2AP63151 447 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 RNASELQ05823 741 aaKnown RBP9.17□□□□□ -0.94
TMCO1-208ENST00000612311 PRPSAP1Q14558 356 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 PSMD6Q15008 389 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 HIBCHQ6NVY1 386 aaPredicted RBP9.17□□□□□ -0.94
TMCO1-208ENST00000612311 ZNF710Q8N1W2 664 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 CFAP61Q8NHU2 1237 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 C1orf54Q8WWF1 131 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 FAM163AQ96GL9 167 aaPredicted RBP9.17□□□□□ -0.94
TMCO1-208ENST00000612311 SPATA33Q96N06 139 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 NCAPGQ9BPX3 1015 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 LACRTQ9GZZ8 138 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 VCX3BQ9H321 246 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 AGPAT3Q9NRZ7 376 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 ASNSD1Q9NWL6 643 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 UVRAGQ9P2Y5 699 aa9.17□□□□□ -0.94
TMCO1-208ENST00000612311 A0A087X0B3 334 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 WDR91A4D1P6 747 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 KRT7P08729 469 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 ZSCAN20P17040 1043 aaPredicted RBP9.16□□□□□ -0.94
TMCO1-208ENST00000612311 FAM133BQ5BKY9 247 aaKnown RBP9.16□□□□□ -0.94
TMCO1-208ENST00000612311 PHLDB3Q6NSJ2 640 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 SRRM1Q8IYB3 904 aaKnown RBP9.16□□□□□ -0.94
TMCO1-208ENST00000612311 SLC30A5Q8TAD4 765 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 RUSC1Q9BVN2 902 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 RIC1Q4ADV7 1423 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 SIGLEC1Q9BZZ2 1709 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 RASA4BC9J798 803 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 MAFGO15525 162 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 TTI1O43156 1089 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 RASA4O43374 803 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 KIF22Q14807 665 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.16□□□□□ -0.94
TMCO1-208ENST00000612311 GMCL1Q96IK5 515 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 FAM237AA0A1B0GTK4 181 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 GMNCA6NCL1 334 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 CYTH3O43739 400 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 TMEM253P0C7T8 217 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 CIITAP33076 1130 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 SPOUT1Q5T280 376 aaKnown RBP9.16□□□□□ -0.94
TMCO1-208ENST00000612311 LRP10Q7Z4F1 713 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 AGBL3Q8NEM8 1001 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 SEPT1Q8WYJ6 367 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 RIN2Q8WYP3 895 aaPredicted RBP9.16□□□□□ -0.94
TMCO1-208ENST00000612311 ATG4CQ96DT6 458 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 DEFB129Q9H1M3 183 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 GOLPH3Q9H4A6 298 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 ANKEF1Q9NU02 776 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 NAGPAQ9UK23 515 aa9.16□□□□□ -0.94
TMCO1-208ENST00000612311 SDC4P31431 198 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 PMS1P54277 932 aaKnown RBP9.15□□□□□ -0.94
TMCO1-208ENST00000612311 SPARCL1Q14515 664 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 KIAA1755Q5JYT7 1200 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 NXNQ6DKJ4 435 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 BZW1Q7L1Q6 419 aaKnown RBP9.15□□□□□ -0.94
TMCO1-208ENST00000612311 MMGT1Q8N4V1 131 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.15□□□□□ -0.94
TMCO1-208ENST00000612311 FAF2Q96CS3 445 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 MYOZ2Q9NPC6 264 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 BCAP29Q9UHQ4 241 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 DUSP10Q9Y6W6 482 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 IQANK1A0A1B0GTG1 560 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 M0QYV0 167 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 TXNDC9O14530 226 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 P4HA2O15460 535 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 SHMT1P34896 483 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 COPB2P35606 906 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 MAP2K2P36507 400 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 CAP2P40123 477 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 TPD52P55327 224 aaPredicted RBP9.15□□□□□ -0.94
TMCO1-208ENST00000612311 PRKCEQ02156 737 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 RPS6KA2Q15349 733 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 PRAMEF18Q5VWM3 479 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 GJB7Q6PEY0 223 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 ABI1Q8IZP0 508 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 HNRNPLLQ8WVV9 542 aaKnown RBP9.15□□□□□ -0.94
TMCO1-208ENST00000612311 TAAR1Q96RJ0 339 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 MMP19Q99542 508 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 MOV10L1Q9BXT6 1211 aaKnown RBP9.15□□□□□ -0.94
TMCO1-208ENST00000612311 PITPNM3Q9BZ71 974 aa9.15□□□□□ -0.94
TMCO1-208ENST00000612311 KLC2Q9H0B6 622 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms