RNA–Protein interactions for RNA: ENST00000610292.4

TP53-218, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,639 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-218ENST00000610292 LRRC34Q8IZ02 419 aa12.78□□□□□ -0.36
TP53-218ENST00000610292 DAW1Q8N136 415 aa12.78□□□□□ -0.36
TP53-218ENST00000610292 CCDC197Q8NCU1 140 aa12.78□□□□□ -0.36
TP53-218ENST00000610292 ZNF577Q9BSK1 485 aa12.78□□□□□ -0.36
TP53-218ENST00000610292 IDI2Q9BXS1 227 aa12.78□□□□□ -0.36
TP53-218ENST00000610292 GEMIN8Q9NWZ8 242 aaKnown RBP12.78□□□□□ -0.36
TP53-218ENST00000610292 PKD2L1Q9P0L9 805 aa12.78□□□□□ -0.36
TP53-218ENST00000610292 SYNGAP1Q96PV0 1343 aa12.78□□□□□ -0.36
TP53-218ENST00000610292 LTBP1Q14766 1721 aa12.78□□□□□ -0.36
TP53-218ENST00000610292 ARHGEF35A5YM69 484 aa12.77□□□□□ -0.36
TP53-218ENST00000610292 MIF4GDA9UHW6 222 aaKnown RBP12.77□□□□□ -0.36
TP53-218ENST00000610292 TRIM37O94972 964 aa12.77□□□□□ -0.36
TP53-218ENST00000610292 SGPL1O95470 568 aa12.77□□□□□ -0.36
TP53-218ENST00000610292 IFNAR2P48551 515 aa12.77□□□□□ -0.36
TP53-218ENST00000610292 PEX5P50542 639 aa12.77□□□□□ -0.36
TP53-218ENST00000610292 CCDC38Q502W7 563 aa12.77□□□□□ -0.36
TP53-218ENST00000610292 RBM26Q5T8P6 1007 aaKnown RBP12.77□□□□□ -0.36
TP53-218ENST00000610292 C11orf63Q6NUN7 778 aa12.77□□□□□ -0.36
TP53-218ENST00000610292 BTNL9Q6UXG8 535 aa12.77□□□□□ -0.36
TP53-218ENST00000610292 KCTD17Q8N5Z5 321 aa12.77□□□□□ -0.36
TP53-218ENST00000610292 PRMT1Q99873 361 aaKnown RBP12.77□□□□□ -0.36
TP53-218ENST00000610292 LXNQ9BS40 222 aa12.77□□□□□ -0.36
TP53-218ENST00000610292 CCDC113Q9H0I3 377 aa12.77□□□□□ -0.36
TP53-218ENST00000610292 INTS9Q9NV88 658 aaKnown RBP12.77□□□□□ -0.36
TP53-218ENST00000610292 DBR1Q9UK59 544 aaKnown RBP12.77□□□□□ -0.36
TP53-218ENST00000610292 ODF2LQ9ULJ1 636 aa12.77□□□□□ -0.36
TP53-218ENST00000610292 PCDHA3Q9Y5H8 950 aa12.77□□□□□ -0.36
TP53-218ENST00000610292 GOLGB1Q14789 3259 aaKnown RBP12.77□□□□□ -0.36
TP53-218ENST00000610292 CCT8L1PA6NM43 557 aa12.77□□□□□ -0.37
TP53-218ENST00000610292 K7ENM7 598 aa12.77□□□□□ -0.37
TP53-218ENST00000610292 CTNNA2P26232 953 aa12.77□□□□□ -0.37
TP53-218ENST00000610292 VAMP7P51809 220 aa12.77□□□□□ -0.37
TP53-218ENST00000610292 HADHBP55084 474 aaKnown RBP12.77□□□□□ -0.37
TP53-218ENST00000610292 SNCBQ16143 134 aa12.77□□□□□ -0.37
TP53-218ENST00000610292 FAM228AQ86W67 206 aa12.77□□□□□ -0.37
TP53-218ENST00000610292 CCDC25Q86WR0 208 aa12.77□□□□□ -0.37
TP53-218ENST00000610292 FMNL3Q8IVF7 1028 aa12.77□□□□□ -0.37
TP53-218ENST00000610292 CCDC105Q8IYK2 499 aa12.77□□□□□ -0.37
TP53-218ENST00000610292 SGSM3Q96HU1 749 aa12.77□□□□□ -0.37
TP53-218ENST00000610292 SCLT1Q96NL6 688 aa12.77□□□□□ -0.37
TP53-218ENST00000610292 POP1Q99575 1024 aaKnown RBP12.77□□□□□ -0.37
TP53-218ENST00000610292 ELAC2Q9BQ52 826 aaKnown RBP12.77□□□□□ -0.37
TP53-218ENST00000610292 CBWD1Q9BRT8 395 aa12.77□□□□□ -0.37
TP53-218ENST00000610292 KDM4CQ9H3R0 1056 aa12.77□□□□□ -0.37
TP53-218ENST00000610292 TDRD3Q9H7E2 651 aaKnown RBP12.77□□□□□ -0.37
TP53-218ENST00000610292 A1CFQ9NQ94 594 aaKnown RBP12.77□□□□□ -0.37
TP53-218ENST00000610292 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.77□□□□□ -0.37
TP53-218ENST00000610292 MTRF1LQ9UGC7 380 aaKnown RBP12.77□□□□□ -0.37
TP53-218ENST00000610292 PCYOX1Q9UHG3 505 aa12.77□□□□□ -0.37
TP53-218ENST00000610292 TRPC6Q9Y210 931 aa12.77□□□□□ -0.37
TP53-218ENST00000610292 UBE4BO95155 1302 aa12.77□□□□□ -0.37
TP53-218ENST00000610292 POLR2MP0CAP2 368 aa12.76□□□□□ -0.37
TP53-218ENST00000610292 CLUL1Q15846 466 aa12.76□□□□□ -0.37
TP53-218ENST00000610292 TBC1D10BQ4KMP7 808 aaPredicted RBP12.76□□□□□ -0.37
TP53-218ENST00000610292 CEP55Q53EZ4 464 aa12.76□□□□□ -0.37
TP53-218ENST00000610292 C6orf118Q5T5N4 469 aa12.76□□□□□ -0.37
TP53-218ENST00000610292 SEL1L2Q5TEA6 688 aa12.76□□□□□ -0.37
TP53-218ENST00000610292 CEP57Q86XR8 500 aa12.76□□□□□ -0.37
TP53-218ENST00000610292 SH2D3AQ9BRG2 576 aa12.76□□□□□ -0.37
TP53-218ENST00000610292 STRA6Q9BX79 667 aa12.76□□□□□ -0.37
TP53-218ENST00000610292 TPX2Q9ULW0 747 aaKnown RBP12.76□□□□□ -0.37
TP53-218ENST00000610292 TESPA1A2RU30 521 aaPredicted RBP12.76□□□□□ -0.37
TP53-218ENST00000610292 PODXLO00592 558 aa12.76□□□□□ -0.37
TP53-218ENST00000610292 RIPK2O43353 540 aa12.76□□□□□ -0.37
TP53-218ENST00000610292 VIMP08670 466 aaKnown RBP12.76□□□□□ -0.37
TP53-218ENST00000610292 CHRNB2P17787 502 aa12.76□□□□□ -0.37
TP53-218ENST00000610292 STAT2P52630 851 aa12.76□□□□□ -0.37
TP53-218ENST00000610292 NOP9Q86U38 636 aaKnown RBP12.76□□□□□ -0.37
TP53-218ENST00000610292 SLC9A9Q8IVB4 645 aa12.76□□□□□ -0.37
TP53-218ENST00000610292 ACER1Q8TDN7 264 aa12.76□□□□□ -0.37
TP53-218ENST00000610292 CNOT7Q9UIV1 285 aaKnown RBP12.76□□□□□ -0.37
TP53-218ENST00000610292 LY75O60449 1722 aa12.76□□□□□ -0.37
TP53-218ENST00000610292 QSER1Q2KHR3 1735 aa12.76□□□□□ -0.37
TP53-218ENST00000610292 SMCHD1A6NHR9 2005 aa12.76□□□□□ -0.37
TP53-218ENST00000610292 SIPA1L1O43166 1804 aa12.76□□□□□ -0.37
TP53-218ENST00000610292 PPIP5K2O43314 1243 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 RTN2O75298 545 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 AGTP01019 485 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 RARAP10276 462 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 HSPA6P17066 643 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 COILP38432 576 aaPredicted RBP12.75□□□□□ -0.37
TP53-218ENST00000610292 ADCY2Q08462 1091 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 CETN1Q12798 172 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 XRCC4Q13426 336 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 C1orf220Q5T0J3 134 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 PADI6Q6TGC4 694 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 TRMT1LQ7Z2T5 733 aaKnown RBP12.75□□□□□ -0.37
TP53-218ENST00000610292 COL23A1Q86Y22 540 aaPredicted RBP12.75□□□□□ -0.37
TP53-218ENST00000610292 PLEKHO2Q8TD55 490 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 RPS6KC1Q96S38 1066 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 EP400Q96L91 3159 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 PFASO15067 1338 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 RASGRF2O14827 1237 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 CYP26A1O43174 497 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 SPOPO43791 374 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 ALAS1P13196 640 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 RFX1P22670 979 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 PDE4CQ08493 712 aa12.75□□□□□ -0.37
TP53-218ENST00000610292 AUHQ13825 339 aaKnown RBP12.75□□□□□ -0.37
TP53-218ENST00000610292 EPC2Q52LR7 807 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms