RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 SDR16C5Q8N3Y7 309 aa12.73□□□□□ -0.37
CTCFL-217ENST00000608425 SPOCK2Q92563 424 aa12.73□□□□□ -0.37
CTCFL-217ENST00000608425 MIS12Q9H081 205 aa12.73□□□□□ -0.37
CTCFL-217ENST00000608425 CUEDC2Q9H467 287 aa12.73□□□□□ -0.37
CTCFL-217ENST00000608425 KIAA1522Q9P206 1035 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-217ENST00000608425 CROTQ9UKG9 612 aa12.73□□□□□ -0.37
CTCFL-217ENST00000608425 TBC1D30Q9Y2I9 924 aa12.73□□□□□ -0.37
CTCFL-217ENST00000608425 NOC2LQ9Y3T9 749 aaKnown RBP12.73□□□□□ -0.37
CTCFL-217ENST00000608425 GOLGA8AA7E2F4 631 aa12.73□□□□□ -0.37
CTCFL-217ENST00000608425 B4E1Z4 1266 aa12.73□□□□□ -0.37
CTCFL-217ENST00000608425 MAP3K7O43318 606 aa12.73□□□□□ -0.37
CTCFL-217ENST00000608425 LCA5LO95447 670 aa12.73□□□□□ -0.37
CTCFL-217ENST00000608425 PABPC4LP0CB38 370 aaKnown RBP12.73□□□□□ -0.37
CTCFL-217ENST00000608425 EEF1GP26641 437 aaKnown RBP12.73□□□□□ -0.37
CTCFL-217ENST00000608425 PRKCIP41743 596 aa12.73□□□□□ -0.37
CTCFL-217ENST00000608425 AUHQ13825 339 aaKnown RBP12.73□□□□□ -0.37
CTCFL-217ENST00000608425 IZUMO2Q6UXV1 221 aa12.73□□□□□ -0.37
CTCFL-217ENST00000608425 RAVER1Q8IY67 606 aaKnown RBP12.73□□□□□ -0.37
CTCFL-217ENST00000608425 CSGALNACT2Q8N6G5 542 aa12.73□□□□□ -0.37
CTCFL-217ENST00000608425 IGDCC4Q8TDY8 1250 aa12.73□□□□□ -0.37
CTCFL-217ENST00000608425 SH3TC2Q8TF17 1288 aa12.73□□□□□ -0.37
CTCFL-217ENST00000608425 SNX27Q96L92 541 aa12.73□□□□□ -0.37
CTCFL-217ENST00000608425 CNOT6LQ96LI5 555 aaKnown RBP12.73□□□□□ -0.37
CTCFL-217ENST00000608425 DUSP9Q99956 384 aaKnown RBP12.73□□□□□ -0.37
CTCFL-217ENST00000608425 ARMT1Q9H993 441 aa12.73□□□□□ -0.37
CTCFL-217ENST00000608425 NUMBLQ9Y6R0 609 aa12.73□□□□□ -0.37
CTCFL-217ENST00000608425 hCG_1642624A0A1W2PR95 340 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 CCDC169A6NNP5 214 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 STK10O94804 968 aaKnown RBP12.72□□□□□ -0.37
CTCFL-217ENST00000608425 PCSK6P29122 969 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 ARID5AQ03989 594 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 AP1B1Q10567 949 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 VSTM1Q6UX27 236 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 TAF4BQ92750 862 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 PLIN2Q99541 437 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 STK33Q9BYT3 514 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 CEP72Q9P209 647 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 LRP2BPQ9P2M1 347 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 RABL2BQ9UNT1 228 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 ITM2BQ9Y287 266 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 CCDC88AQ3V6T2 1871 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 CCDC160A6NGH7 325 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 ZNF862O60290 1169 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 SERPINB7O75635 380 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 PORP16435 677 aaPredicted RBP12.72□□□□□ -0.37
CTCFL-217ENST00000608425 LONRF1Q17RB8 773 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 ASTE1Q2TB18 679 aaPredicted RBP12.72□□□□□ -0.37
CTCFL-217ENST00000608425 CAVIN4Q5BKX8 364 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 RNF43Q68DV7 783 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 PDXDC2PQ6P474 469 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 LCORLQ8N3X6 602 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 TMCO5AQ8N6Q1 288 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 ERMNQ8TAM6 284 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 RBM46Q8TBY0 533 aaKnown RBP12.72□□□□□ -0.37
CTCFL-217ENST00000608425 GLG1Q92896 1179 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 SHISA4Q96DD7 197 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 CADM1Q9BY67 442 aaKnown RBP12.72□□□□□ -0.37
CTCFL-217ENST00000608425 PABPC3Q9H361 631 aaKnown RBP12.72□□□□□ -0.37
CTCFL-217ENST00000608425 LY9Q9HBG7 655 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 DNAJC17Q9NVM6 304 aaKnown RBP12.72□□□□□ -0.37
CTCFL-217ENST00000608425 MINPP1Q9UNW1 487 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 SNX24Q9Y343 169 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 TMED5Q9Y3A6 229 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 LAMB1P07942 1786 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 VILLO15195 856 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 PDE5AO76074 875 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 PSMG1O95456 288 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 MARK3P27448 753 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 FOXN2P32314 431 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 RCAN1P53805 252 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 SSRP1Q08945 709 aaKnown RBP12.72□□□□□ -0.37
CTCFL-217ENST00000608425 RPS6KA1Q15418 735 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 METTL13Q8N6R0 699 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 EIF1ADQ8N9N8 165 aaKnown RBP12.72□□□□□ -0.37
CTCFL-217ENST00000608425 PPFIBP2Q8ND30 876 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 FBXO25Q8TCJ0 367 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 PRPF31Q8WWY3 499 aaKnown RBP12.72□□□□□ -0.37
CTCFL-217ENST00000608425 PPP2R3CQ969Q6 453 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 SETDB2Q96T68 719 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 HESX1Q9UBX0 185 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 USP21Q9UK80 565 aa12.72□□□□□ -0.37
CTCFL-217ENST00000608425 ZBTB43O43298 467 aa12.71□□□□□ -0.37
CTCFL-217ENST00000608425 OXSR1O95747 527 aaPredicted RBP12.71□□□□□ -0.37
CTCFL-217ENST00000608425 AGTP01019 485 aa12.71□□□□□ -0.37
CTCFL-217ENST00000608425 SCG2P13521 617 aa12.71□□□□□ -0.37
CTCFL-217ENST00000608425 YY1P25490 414 aa12.71□□□□□ -0.37
CTCFL-217ENST00000608425 POLR2FP61218 127 aaKnown RBP12.71□□□□□ -0.37
CTCFL-217ENST00000608425 CLPPQ16740 277 aaPredicted RBP12.71□□□□□ -0.37
CTCFL-217ENST00000608425 EXOC3L4Q17RC7 722 aa12.71□□□□□ -0.37
CTCFL-217ENST00000608425 TTI2Q6NXR4 508 aa12.71□□□□□ -0.37
CTCFL-217ENST00000608425 OGFOD1Q8N543 542 aa12.71□□□□□ -0.37
CTCFL-217ENST00000608425 RNF41Q9H4P4 317 aaPredicted RBP12.71□□□□□ -0.37
CTCFL-217ENST00000608425 EBF3Q9H4W6 596 aa12.71□□□□□ -0.37
CTCFL-217ENST00000608425 TSC22D4Q9Y3Q8 395 aa12.71□□□□□ -0.37
CTCFL-217ENST00000608425 SLC4A4Q9Y6R1 1079 aa12.71□□□□□ -0.37
CTCFL-217ENST00000608425 DLEC1Q9Y238 1755 aa12.71□□□□□ -0.37
CTCFL-217ENST00000608425 TNRC6CQ9HCJ0 1690 aaKnown RBP12.71□□□□□ -0.38
CTCFL-217ENST00000608425 USP1O94782 785 aa12.71□□□□□ -0.38
CTCFL-217ENST00000608425 NUDT17P0C025 328 aa12.71□□□□□ -0.38
CTCFL-217ENST00000608425 TFPTP0C1Z6 253 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms