RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 RABGGTBP53611 331 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 ASIC1P78348 528 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 CCDC85BQ15834 202 aaPredicted RBP15.69■□□□□ 0.1
CTSA-211ENST00000606066 HERC4Q5GLZ8 1057 aaPredicted RBP15.69■□□□□ 0.1
CTSA-211ENST00000606066 KANK3Q6NY19 840 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 HAUS6Q7Z4H7 955 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 APBB1IPQ7Z5R6 666 aaPredicted RBP15.69■□□□□ 0.1
CTSA-211ENST00000606066 TMCO2Q7Z6W1 182 aaPredicted RBP15.69■□□□□ 0.1
CTSA-211ENST00000606066 ECHDC2Q86YB7 292 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 HACE1Q8IYU2 909 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 KCNN1Q92952 543 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 PGBD4Q96DM1 585 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 PAGE5Q96GU1 130 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 UHRF1Q96T88 793 aaPredicted RBP15.69■□□□□ 0.1
CTSA-211ENST00000606066 MRPL4Q9BYD3 311 aaKnown RBP15.69■□□□□ 0.1
CTSA-211ENST00000606066 TRIM6Q9C030 488 aaPredicted RBP15.69■□□□□ 0.1
CTSA-211ENST00000606066 FAM105AQ9NUU6 356 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 PANK4Q9NVE7 773 aa15.69■□□□□ 0.1
CTSA-211ENST00000606066 SIP14410 1827 aa15.68■□□□□ 0.1
CTSA-211ENST00000606066 TET1Q8NFU7 2136 aa15.68■□□□□ 0.1
CTSA-211ENST00000606066 FRMD3A2A2Y4 597 aa15.68■□□□□ 0.1
CTSA-211ENST00000606066 N4BP3O15049 544 aa15.68■□□□□ 0.1
CTSA-211ENST00000606066 B4GALT5O43286 388 aa15.68■□□□□ 0.1
CTSA-211ENST00000606066 ZNF623O75123 536 aa15.68■□□□□ 0.1
CTSA-211ENST00000606066 HTRA4P83105 476 aaPredicted RBP15.68■□□□□ 0.1
CTSA-211ENST00000606066 SLC27A1Q6PCB7 646 aa15.68■□□□□ 0.1
CTSA-211ENST00000606066 CLEC17AQ6ZS10 378 aa15.68■□□□□ 0.1
CTSA-211ENST00000606066 CRIPAKQ8N1N5 446 aa15.68■□□□□ 0.1
CTSA-211ENST00000606066 RSPH1Q8WYR4 309 aa15.68■□□□□ 0.1
CTSA-211ENST00000606066 CPB2Q96IY4 423 aa15.68■□□□□ 0.1
CTSA-211ENST00000606066 GBP4Q96PP9 640 aa15.68■□□□□ 0.1
CTSA-211ENST00000606066 ADPGKQ9BRR6 497 aa15.68■□□□□ 0.1
CTSA-211ENST00000606066 GOLPH3LQ9H4A5 285 aa15.68■□□□□ 0.1
CTSA-211ENST00000606066 ST6GALNAC4Q9H4F1 302 aa15.68■□□□□ 0.1
CTSA-211ENST00000606066 MRPL44Q9H9J2 332 aaKnown RBP15.68■□□□□ 0.1
CTSA-211ENST00000606066 OLFML3Q9NRN5 406 aa15.68■□□□□ 0.1
CTSA-211ENST00000606066 PCDHB2Q9Y5E7 798 aa15.68■□□□□ 0.1
CTSA-211ENST00000606066 PVALEFA0A1B0GWK0 134 aa15.67■□□□□ 0.1
CTSA-211ENST00000606066 DGKIO75912 1065 aa15.67■□□□□ 0.1
CTSA-211ENST00000606066 UBE2HP62256 183 aa15.67■□□□□ 0.1
CTSA-211ENST00000606066 FAM160A1Q05DH4 1040 aa15.67■□□□□ 0.1
CTSA-211ENST00000606066 ATF7IP2Q5U623 682 aa15.67■□□□□ 0.1
CTSA-211ENST00000606066 KRBA2Q6ZNG9 492 aa15.67■□□□□ 0.1
CTSA-211ENST00000606066 STXBP4Q6ZWJ1 553 aa15.67■□□□□ 0.1
CTSA-211ENST00000606066 UNC13DQ70J99 1090 aa15.67■□□□□ 0.1
CTSA-211ENST00000606066 ZNF720Q7Z2F6 126 aa15.67■□□□□ 0.1
CTSA-211ENST00000606066 SFR1Q86XK3 245 aa15.67■□□□□ 0.1
CTSA-211ENST00000606066 ABI1Q8IZP0 508 aa15.67■□□□□ 0.1
CTSA-211ENST00000606066 FMR1NBQ8N0W7 255 aaPredicted RBP15.67■□□□□ 0.1
CTSA-211ENST00000606066 RNF169Q8NCN4 708 aa15.67■□□□□ 0.1
CTSA-211ENST00000606066 HVCN1Q96D96 273 aa15.67■□□□□ 0.1
CTSA-211ENST00000606066 UBN1Q9NPG3 1134 aa15.67■□□□□ 0.1
CTSA-211ENST00000606066 TBX20Q9UMR3 447 aa15.67■□□□□ 0.1
CTSA-211ENST00000606066 PCDHB13Q9Y5F0 798 aa15.67■□□□□ 0.1
CTSA-211ENST00000606066 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.66■□□□□ 0.1
CTSA-211ENST00000606066 GTPBP6O43824 516 aaPredicted RBP15.66■□□□□ 0.1
CTSA-211ENST00000606066 NMT1P30419 496 aaKnown RBP15.66■□□□□ 0.1
CTSA-211ENST00000606066 GTF2BQ00403 316 aa15.66■□□□□ 0.1
CTSA-211ENST00000606066 CUL4BQ13620 913 aa15.66■□□□□ 0.1
CTSA-211ENST00000606066 ALCAMQ13740 583 aa15.66■□□□□ 0.1
CTSA-211ENST00000606066 AAK1Q2M2I8 961 aa15.66■□□□□ 0.1
CTSA-211ENST00000606066 UBXN11Q5T124 520 aa15.66■□□□□ 0.1
CTSA-211ENST00000606066 NT5DC1Q5TFE4 455 aa15.66■□□□□ 0.1
CTSA-211ENST00000606066 PPP2R2DQ66LE6 453 aa15.66■□□□□ 0.1
CTSA-211ENST00000606066 ZPBP2Q6X784 338 aa15.66■□□□□ 0.1
CTSA-211ENST00000606066 MRPL10Q7Z7H8 261 aaKnown RBP15.66■□□□□ 0.1
CTSA-211ENST00000606066 ZNF598Q86UK7 904 aaKnown RBP15.66■□□□□ 0.1
CTSA-211ENST00000606066 CCDC47Q96A33 483 aaKnown RBP15.66■□□□□ 0.1
CTSA-211ENST00000606066 FIZ1Q96SL8 496 aa15.66■□□□□ 0.1
CTSA-211ENST00000606066 TCHPQ9BT92 498 aa15.66■□□□□ 0.1
CTSA-211ENST00000606066 BLZF1Q9H2G9 400 aa15.66■□□□□ 0.1
CTSA-211ENST00000606066 HOOK1Q9UJC3 728 aaKnown RBP15.66■□□□□ 0.1
CTSA-211ENST00000606066 TNFSF13BQ9Y275 285 aa15.66■□□□□ 0.1
CTSA-211ENST00000606066 PRPF40AO75400 957 aaKnown RBP15.65■□□□□ 0.1
CTSA-211ENST00000606066 GCNT3O95395 438 aa15.65■□□□□ 0.1
CTSA-211ENST00000606066 CA3P07451 260 aa15.65■□□□□ 0.1
CTSA-211ENST00000606066 MYOGP15173 224 aa15.65■□□□□ 0.1
CTSA-211ENST00000606066 COASYQ13057 564 aa15.65■□□□□ 0.1
CTSA-211ENST00000606066 SNW1Q13573 536 aaKnown RBP15.65■□□□□ 0.1
CTSA-211ENST00000606066 BTG3Q14201 252 aaPredicted RBP15.65■□□□□ 0.1
CTSA-211ENST00000606066 DCAF4L1Q3SXM0 396 aa15.65■□□□□ 0.1
CTSA-211ENST00000606066 TAS1R3Q7RTX0 852 aa15.65■□□□□ 0.1
CTSA-211ENST00000606066 GRAMD1CQ8IYS0 662 aa15.65■□□□□ 0.1
CTSA-211ENST00000606066 CMTR2Q8IYT2 770 aaKnown RBP15.65■□□□□ 0.1
CTSA-211ENST00000606066 ENGASEQ8NFI3 743 aa15.65■□□□□ 0.1
CTSA-211ENST00000606066 SP7Q8TDD2 431 aaPredicted RBP15.65■□□□□ 0.1
CTSA-211ENST00000606066 ZNF689Q96CS4 500 aaPredicted RBP15.65■□□□□ 0.1
CTSA-211ENST00000606066 BICD1Q96G01 975 aa15.65■□□□□ 0.1
CTSA-211ENST00000606066 TIGD1Q96MW7 591 aa15.65■□□□□ 0.1
CTSA-211ENST00000606066 ACO2Q99798 780 aaKnown RBP15.65■□□□□ 0.1
CTSA-211ENST00000606066 TARS2Q9BW92 718 aaKnown RBP15.65■□□□□ 0.1
CTSA-211ENST00000606066 EIF2AQ9BY44 585 aaKnown RBP15.65■□□□□ 0.1
CTSA-211ENST00000606066 TMEM117Q9H0C3 514 aa15.65■□□□□ 0.1
CTSA-211ENST00000606066 PDZD7Q9H5P4 517 aa15.65■□□□□ 0.1
CTSA-211ENST00000606066 TBC1D7Q9P0N9 293 aa15.65■□□□□ 0.1
CTSA-211ENST00000606066 EXOC7Q9UPT5 735 aa15.65■□□□□ 0.1
CTSA-211ENST00000606066 IPPQ9Y573 584 aa15.65■□□□□ 0.1
CTSA-211ENST00000606066 TRANK1O15050 2925 aa15.65■□□□□ 0.1
CTSA-211ENST00000606066 TTLL13PA6NNM8 815 aa15.64■□□□□ 0.09
CTSA-211ENST00000606066 GOLGA6L22H0YM25 854 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms