RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 GBP7Q8N8V2 638 aaPredicted RBP5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 ZBTB34Q8NCN2 500 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 CENPIQ92674 756 aaPredicted RBP5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 CITED4Q96RK1 184 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 GORASP1Q9BQQ3 440 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 TTLL2Q9BWV7 592 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 TNMDQ9H2S6 317 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 ZNF358Q9NW07 568 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 TUBA8Q9NY65 449 aaPredicted RBP5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 SEPT10Q9P0V9 454 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 DACH1Q9UI36 760 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 CHIC2Q9UKJ5 165 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 ERICH2A1L162 156 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 ENO4A6NNW6 628 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 STMND1H3BQB6 276 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 WNT7AO00755 349 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 NMT2O60551 498 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 CYP2E1P05181 493 aaPredicted RBP5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 HSD3B1P14060 373 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 VEGFAP15692 232 aaPredicted RBP5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 ATP4AP20648 1035 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 CCND1P24385 295 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 PHKA2P46019 1235 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 GSK3AP49840 483 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 ATXN1P54253 815 aaKnown RBP5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 GDF10P55107 478 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 SLC9A5Q14940 896 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 TEAD4Q15561 434 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 CAVIN4Q5BKX8 364 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 FAM209AQ5JX71 171 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 FOXR1Q6PIV2 292 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 PPP1R42Q7Z4L9 355 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 TRIM50Q86XT4 487 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 RPAP2Q8IXW5 612 aaPredicted RBP5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 GJD3Q8N144 294 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 ZBTB8BQ8NAP8 495 aaPredicted RBP5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 MOSPD2Q8NHP6 518 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 XAGE2Q96GT9 111 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 TAAR9Q96RI9 348 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 SH3GL1Q99961 368 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 SORBS1Q9BX66 1292 aaKnown RBP5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 CRLF2Q9HC73 371 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 TCF7L2Q9NQB0 619 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 ADAMTS8Q9UP79 889 aa5.44□□□□□ -1.54
SPTBN1-206ENST00000602898 RPAP1Q9BWH6 1393 aaPredicted RBP5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 A0A1W2PRU2 124 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 GOLGA6L9A6NEM1 432 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 LIN7AO14910 233 aaPredicted RBP5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 EZRP15311 586 aaKnown RBP5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 SMPD1P17405 629 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 PPM1AP35813 382 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 SULT1E1P49888 294 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 PSMD7P51665 324 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 NEK4P51957 841 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 DRG2P55039 364 aaKnown RBP5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 CCNA1P78396 465 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 EFR3AQ14156 821 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 CCDC57Q2TAC2 916 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 TMC6Q7Z403 805 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 GALNT7Q86SF2 657 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 ZNF598Q86UK7 904 aaKnown RBP5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 CCDC50Q8IVM0 306 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 GOLM1Q8NBJ4 401 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 ZSWIM2Q8NEG5 633 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 CCDC148Q8NFR7 591 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 KCNG4Q8TDN1 519 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 PANK1Q8TE04 598 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 RNF139Q8WU17 664 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 DHTKD1Q96HY7 919 aaPredicted RBP5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 TMX3Q96JJ7 454 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 FNBP1Q96RU3 617 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 LGR4Q9BXB1 951 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 TRPV4Q9HBA0 871 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 PTBP2Q9UKA9 531 aaKnown RBP5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 HPCAL4Q9UM19 191 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 AK9Q5TCS8 1911 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 ABCC5O15440 1437 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 ABCA3Q99758 1704 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 TBKBP1A7MCY6 615 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 ZEB2O60315 1214 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 AOC2O75106 756 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 ZNF254O75437 659 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 IL2RAP01589 272 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 ZFXP17010 805 aaPredicted RBP5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 RPS6KB1P23443 525 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 CEBPAP49715 358 aaPredicted RBP5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 ERVK-9P63128 1117 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 CUL4BQ13620 913 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 SCARB2Q14108 478 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 IKBKEQ14164 716 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 PPP1R7Q15435 360 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 ZNF674Q2M3X9 581 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 MAP3K21Q5TCX8 1036 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 RNF219Q5W0B1 726 aaPredicted RBP5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 CAPRIN2Q6IMN6 1127 aaKnown RBP5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 CEP112Q8N8E3 955 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 CNKSR1Q969H4 720 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 CFAP36Q96G28 342 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 FUBP3Q96I24 572 aaKnown RBP eCLIP5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 HIC2Q96JB3 615 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms