RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 FAF1Q9UNN5 650 aaPredicted RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 ATP11BQ9Y2G3 1177 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 CAMSAP1Q5T5Y3 1602 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 ADGRF5Q8IZF2 1346 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 HOXA2O43364 376 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 AP1G1O43747 822 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 ARHGEF15O94989 841 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 KRT75O95678 551 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 SERPINC1P01008 464 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 S100BP04271 92 aaPredicted RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 MYL5Q02045 173 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 MAP3K10Q02779 954 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 RELQ04864 619 aaPredicted RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 AP1B1Q10567 949 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 CCNJQ5T5M9 372 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 RNASEH2BQ5TBB1 312 aaKnown RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 METTL2BQ6P1Q9 378 aaKnown RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 ZC3H18Q86VM9 953 aaKnown RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 SCYL3Q8IZE3 742 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 TTLL11Q8NHH1 800 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 BCL7CQ8WUZ0 217 aaPredicted RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 NELFBQ8WX92 580 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 TMEM87BQ96K49 555 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 AIFM3Q96NN9 605 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 BIRC8Q96P09 236 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 NLRP3Q96P20 1036 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 NUDCD1Q96RS6 583 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 LRMDAQ9H2I8 198 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 EHD1Q9H4M9 534 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 SIRT5Q9NXA8 310 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 MOSPD1Q9UJG1 213 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 ANGPTL3Q9Y5C1 460 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 NDC80O14777 642 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 NCK2O43639 380 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 UFL1O94874 794 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 FGAP02671 866 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 MYL6BP14649 208 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 ETS2P15036 469 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 AK2P54819 239 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 ATP6V0D1P61421 351 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 NAA20P61599 178 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 C19orf57Q0VDD7 668 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 CYP4V2Q6ZWL3 525 aaPredicted RBP9.44□□□□□ -0.9
COMMD3-215ENST00000602574 LRRTM3Q86VH5 581 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 CCDC89Q8N998 374 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 MDM1Q8TC05 714 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 RUFY2Q8WXA3 655 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 DESI2Q9BSY9 194 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 TTPALQ9BTX7 342 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 RUBCNLQ9H714 662 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 PALMDQ9NP74 551 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 ZNF277Q9NRM2 450 aaPredicted RBP9.44□□□□□ -0.9
COMMD3-215ENST00000602574 TXLNGQ9NUQ3 528 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 TNFRSF10DQ9UBN6 386 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 RCOR1Q9UKL0 485 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 AGO2Q9UKV8 859 aaKnown RBP9.44□□□□□ -0.9
COMMD3-215ENST00000602574 APOBEC2Q9Y235 224 aaKnown RBP9.44□□□□□ -0.9
COMMD3-215ENST00000602574 ARHGEF10O15013 1369 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 ARHGEF40Q8TER5 1519 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 ARHGAP10A1A4S6 786 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 CASQ2O14958 399 aaPredicted RBP9.44□□□□□ -0.9
COMMD3-215ENST00000602574 ZW10O43264 779 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 ACSL4O60488 711 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 FGF18O76093 207 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 CDH3P22223 829 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 IL10P22301 178 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 TRIM23P36406 574 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 ECE1P42892 770 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 STAT2P52630 851 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 IGBP1P78318 339 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 PPP2R2BQ00005 443 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 TAGLNQ01995 201 aaKnown RBP9.44□□□□□ -0.9
COMMD3-215ENST00000602574 SMARCB1Q12824 385 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 LEXMQ3ZCV2 418 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 TTC39BQ5VTQ0 682 aaPredicted RBP9.44□□□□□ -0.9
COMMD3-215ENST00000602574 C1orf228Q6PIY5 440 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 TMTC3Q6ZXV5 915 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 METTL3Q86U44 580 aaKnown RBP9.44□□□□□ -0.9
COMMD3-215ENST00000602574 NELFCDQ8IXH7 590 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 LARGE2Q8N3Y3 721 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 LRRC8CQ8TDW0 803 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 GIPC3Q8TF64 312 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 RSAD2Q8WXG1 361 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 PAWRQ96IZ0 340 aaKnown RBP9.44□□□□□ -0.9
COMMD3-215ENST00000602574 CCDC43Q96MW1 224 aaKnown RBP9.44□□□□□ -0.9
COMMD3-215ENST00000602574 ZNF184Q99676 751 aaPredicted RBP9.44□□□□□ -0.9
COMMD3-215ENST00000602574 OLFM1Q99784 485 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 CDH19Q9H159 772 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 PPP1R14DQ9NXH3 145 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 FBXL5Q9UKA1 691 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 DNM3Q9UQ16 869 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 DMTF1Q9Y222 760 aa9.44□□□□□ -0.9
COMMD3-215ENST00000602574 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.44□□□□□ -0.9
COMMD3-215ENST00000602574 HNRNPCL2B2RXH8 293 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 GOLGA8RI6L899 631 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 MCF2LO15068 1137 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 ATMINO43313 823 aaPredicted RBP9.43□□□□□ -0.9
COMMD3-215ENST00000602574 HNRNPCL1O60812 293 aaKnown RBP9.43□□□□□ -0.9
COMMD3-215ENST00000602574 MYZAPP0CAP1 466 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 PCNAP12004 261 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms