RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 SLC26A7Q8TE54 656 aa21.74■■□□□ 1.07
UPF1-207ENST00000599848 SLITRK1Q96PX8 696 aa21.74■■□□□ 1.07
UPF1-207ENST00000599848 ADORA2BP29275 332 aa21.74■■□□□ 1.07
UPF1-207ENST00000599848 EIF4A3P38919 411 aaKnown RBP21.74■■□□□ 1.07
UPF1-207ENST00000599848 KIF19Q2TAC6 998 aa21.74■■□□□ 1.07
UPF1-207ENST00000599848 SAMD3Q8N6K7 520 aa21.74■■□□□ 1.07
UPF1-207ENST00000599848 USP13Q92995 863 aaPredicted RBP21.74■■□□□ 1.07
UPF1-207ENST00000599848 PRMT7Q9NVM4 692 aaPredicted RBP21.74■■□□□ 1.07
UPF1-207ENST00000599848 ERAP1Q9NZ08 941 aa21.74■■□□□ 1.07
UPF1-207ENST00000599848 MOCS2O96007 188 aaPredicted RBP21.73■■□□□ 1.07
UPF1-207ENST00000599848 CRLF3Q8IUI8 442 aa21.73■■□□□ 1.07
UPF1-207ENST00000599848 TDRD7Q8NHU6 1098 aaKnown RBP21.73■■□□□ 1.07
UPF1-207ENST00000599848 NR2E3Q9Y5X4 410 aa21.73■■□□□ 1.07
UPF1-207ENST00000599848 BCAR1P56945 870 aa21.73■■□□□ 1.07
UPF1-207ENST00000599848 SNRPFP62306 86 aaKnown RBP21.73■■□□□ 1.07
UPF1-207ENST00000599848 ADCY2Q08462 1091 aa21.73■■□□□ 1.07
UPF1-207ENST00000599848 LBRQ14739 615 aaKnown RBP21.73■■□□□ 1.07
UPF1-207ENST00000599848 ADGRF4Q8IZF3 695 aa21.73■■□□□ 1.07
UPF1-207ENST00000599848 CLCA2Q9UQC9 943 aa21.73■■□□□ 1.07
UPF1-207ENST00000599848 STK38LQ9Y2H1 464 aa21.73■■□□□ 1.07
UPF1-207ENST00000599848 TGFB2P61812 414 aa21.73■■□□□ 1.07
UPF1-207ENST00000599848 ADCY1Q08828 1119 aa21.73■■□□□ 1.07
UPF1-207ENST00000599848 MFN1Q8IWA4 741 aa21.73■■□□□ 1.07
UPF1-207ENST00000599848 BAIAP2L1Q9UHR4 511 aa21.73■■□□□ 1.07
UPF1-207ENST00000599848 TRIM33Q9UPN9 1127 aa21.73■■□□□ 1.07
UPF1-207ENST00000599848 SPECC1L-ADORA2AF8WAN1 911 aa21.73■■□□□ 1.07
UPF1-207ENST00000599848 EYA4O95677 639 aa21.73■■□□□ 1.07
UPF1-207ENST00000599848 OAS2P29728 719 aaKnown RBP21.73■■□□□ 1.07
UPF1-207ENST00000599848 CHRNA5P30532 468 aa21.73■■□□□ 1.07
UPF1-207ENST00000599848 SLC8A1P32418 973 aa21.73■■□□□ 1.07
UPF1-207ENST00000599848 ZNF512Q96ME7 567 aaPredicted RBP21.73■■□□□ 1.07
UPF1-207ENST00000599848 GMPSP49915 693 aaPredicted RBP21.72■■□□□ 1.07
UPF1-207ENST00000599848 COG4Q9H9E3 785 aa21.72■■□□□ 1.07
UPF1-207ENST00000599848 ADARB2Q9NS39 739 aaKnown RBP21.72■■□□□ 1.07
UPF1-207ENST00000599848 ALDH7A1P49419 539 aaKnown RBP21.72■■□□□ 1.07
UPF1-207ENST00000599848 PTPROQ16827 1216 aa21.72■■□□□ 1.07
UPF1-207ENST00000599848 CYP4A22Q5TCH4 519 aa21.72■■□□□ 1.07
UPF1-207ENST00000599848 USP17L6PQ6QN14 398 aa21.72■■□□□ 1.07
UPF1-207ENST00000599848 RRM2BQ7LG56 351 aa21.72■■□□□ 1.07
UPF1-207ENST00000599848 NDEL1Q9GZM8 345 aa21.72■■□□□ 1.07
UPF1-207ENST00000599848 KIF1BO60333 1816 aa21.72■■□□□ 1.07
UPF1-207ENST00000599848 LUC7L3O95232 432 aaKnown RBP21.72■■□□□ 1.07
UPF1-207ENST00000599848 SEC24BO95487 1268 aa21.72■■□□□ 1.07
UPF1-207ENST00000599848 PSMA3P25788 255 aa21.72■■□□□ 1.07
UPF1-207ENST00000599848 SLC15A2Q16348 729 aa21.72■■□□□ 1.07
UPF1-207ENST00000599848 C6orf118Q5T5N4 469 aa21.72■■□□□ 1.07
UPF1-207ENST00000599848 PDXDC1Q6P996 788 aa21.72■■□□□ 1.07
UPF1-207ENST00000599848 PLEKHA8P1O95397 391 aa21.72■■□□□ 1.07
UPF1-207ENST00000599848 KRT35Q92764 455 aa21.72■■□□□ 1.07
UPF1-207ENST00000599848 EXT2Q93063 718 aa21.72■■□□□ 1.07
UPF1-207ENST00000599848 PLA2G12BQ9BX93 195 aa21.72■■□□□ 1.07
UPF1-207ENST00000599848 L3MBTL1Q9Y468 752 aa21.72■■□□□ 1.07
UPF1-207ENST00000599848 TSPOAP1O95153 1857 aa21.72■■□□□ 1.07
UPF1-207ENST00000599848 ARHGAP10A1A4S6 786 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 GNASQ5JWF2 1037 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 PANX2Q96RD6 677 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 MTFR1LQ9H019 292 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 NHEJ1Q9H9Q4 299 aaPredicted RBP21.71■■□□□ 1.07
UPF1-207ENST00000599848 FIS1Q9Y3D6 152 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 LRRIQ3A6PVS8 624 aaPredicted RBP21.71■■□□□ 1.07
UPF1-207ENST00000599848 OPHN1O60890 802 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 CYP2C9P11712 490 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 COPS2P61201 443 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 RCN2Q14257 317 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 UHMK1Q8TAS1 419 aaKnown RBP21.71■■□□□ 1.07
UPF1-207ENST00000599848 NCLNQ969V3 563 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 VCPKMTQ9H867 229 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 PCDHA13Q9Y5I0 950 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 PREPLQ4J6C6 727 aaPredicted RBP21.71■■□□□ 1.07
UPF1-207ENST00000599848 TXLNGQ9NUQ3 528 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 CPSF2Q9P2I0 782 aaKnown RBP21.71■■□□□ 1.07
UPF1-207ENST00000599848 PPP1R9AQ9ULJ8 1098 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 COPEO14579 308 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 TMEM132DQ14C87 1099 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 ZNF394Q53GI3 561 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 EVA1BQ9NVM1 165 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 SENP1Q9P0U3 644 aa21.71■■□□□ 1.07
UPF1-207ENST00000599848 MBD5Q9P267 1494 aa21.7■■□□□ 1.06
UPF1-207ENST00000599848 ATP8B1O43520 1251 aa21.7■■□□□ 1.06
UPF1-207ENST00000599848 CLNS1AP54105 237 aaKnown RBP21.7■■□□□ 1.06
UPF1-207ENST00000599848 MED21Q13503 144 aa21.7■■□□□ 1.06
UPF1-207ENST00000599848 LRRC8AQ8IWT6 810 aa21.7■■□□□ 1.06
UPF1-207ENST00000599848 SEPT8Q92599 483 aa21.7■■□□□ 1.06
UPF1-207ENST00000599848 GPR182O15218 404 aa21.7■■□□□ 1.06
UPF1-207ENST00000599848 KHDRBS2Q5VWX1 349 aaKnown RBP21.7■■□□□ 1.06
UPF1-207ENST00000599848 E4F1Q66K89 784 aaPredicted RBP21.7■■□□□ 1.06
UPF1-207ENST00000599848 MYOZ2Q9NPC6 264 aa21.7■■□□□ 1.06
UPF1-207ENST00000599848 PCDHB6Q9Y5E3 794 aa21.7■■□□□ 1.06
UPF1-207ENST00000599848 RNASEH1O60930 286 aaKnown RBP21.7■■□□□ 1.06
UPF1-207ENST00000599848 GCLMP48507 274 aa21.7■■□□□ 1.06
UPF1-207ENST00000599848 TPI1P60174 286 aa21.7■■□□□ 1.06
UPF1-207ENST00000599848 TRADDQ15628 312 aa21.7■■□□□ 1.06
UPF1-207ENST00000599848 FOXP2O15409 715 aa21.7■■□□□ 1.06
UPF1-207ENST00000599848 VEGFAP15692 232 aaPredicted RBP21.7■■□□□ 1.06
UPF1-207ENST00000599848 RBL2Q08999 1139 aa21.7■■□□□ 1.06
UPF1-207ENST00000599848 PRR5LQ6MZQ0 368 aa21.7■■□□□ 1.06
UPF1-207ENST00000599848 SKA1Q96BD8 255 aa21.7■■□□□ 1.06
UPF1-207ENST00000599848 CYP2D6P10635 497 aa21.69■■□□□ 1.06
UPF1-207ENST00000599848 PTPAQ15257 358 aa21.69■■□□□ 1.06
UPF1-207ENST00000599848 FAM102AQ5T9C2 384 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms