RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 KMT2EQ8IZD2 1858 aa16.25■□□□□ 0.19
EBI3-202ENST00000599339 FAM205CA6NFA0 338 aa16.25■□□□□ 0.19
EBI3-202ENST00000599339 NRP1O14786 923 aa16.25■□□□□ 0.19
EBI3-202ENST00000599339 ZBTB39O15060 712 aa16.25■□□□□ 0.19
EBI3-202ENST00000599339 B4GALT3O60512 393 aa16.25■□□□□ 0.19
EBI3-202ENST00000599339 TSPAN1O60635 241 aa16.25■□□□□ 0.19
EBI3-202ENST00000599339 SOD2P04179 222 aa16.25■□□□□ 0.19
EBI3-202ENST00000599339 AVPR2P30518 371 aa16.25■□□□□ 0.19
EBI3-202ENST00000599339 VCPP55072 806 aaKnown RBP16.25■□□□□ 0.19
EBI3-202ENST00000599339 TMC5Q6UXY8 1006 aa16.25■□□□□ 0.19
EBI3-202ENST00000599339 CCDC149Q6ZUS6 474 aa16.25■□□□□ 0.19
EBI3-202ENST00000599339 GPR149Q86SP6 731 aa16.25■□□□□ 0.19
EBI3-202ENST00000599339 SMG8Q8ND04 991 aaKnown RBP16.25■□□□□ 0.19
EBI3-202ENST00000599339 TNFRSF25Q93038 417 aa16.25■□□□□ 0.19
EBI3-202ENST00000599339 KLHL5Q96PQ7 755 aa16.25■□□□□ 0.19
EBI3-202ENST00000599339 HSD17B14Q9BPX1 270 aa16.25■□□□□ 0.19
EBI3-202ENST00000599339 VN1R3Q9BXE9 311 aa16.25■□□□□ 0.19
EBI3-202ENST00000599339 CSRNP2Q9H175 543 aa16.25■□□□□ 0.19
EBI3-202ENST00000599339 TTC12Q9H892 705 aaPredicted RBP16.25■□□□□ 0.19
EBI3-202ENST00000599339 XPNPEP1Q9NQW7 623 aa16.25■□□□□ 0.19
EBI3-202ENST00000599339 ARL5CA6NH57 179 aa16.24■□□□□ 0.19
EBI3-202ENST00000599339 INPPL1O15357 1258 aa16.24■□□□□ 0.19
EBI3-202ENST00000599339 NEMFO60524 1076 aa16.24■□□□□ 0.19
EBI3-202ENST00000599339 DTNBO60941 627 aa16.24■□□□□ 0.19
EBI3-202ENST00000599339 ADH1AP07327 375 aa16.24■□□□□ 0.19
EBI3-202ENST00000599339 CNPP09543 421 aaKnown RBP16.24■□□□□ 0.19
EBI3-202ENST00000599339 FDPSP14324 419 aaKnown RBP16.24■□□□□ 0.19
EBI3-202ENST00000599339 TXKP42681 527 aa16.24■□□□□ 0.19
EBI3-202ENST00000599339 OR1G1P47890 313 aa16.24■□□□□ 0.19
EBI3-202ENST00000599339 CLCN4P51793 760 aa16.24■□□□□ 0.19
EBI3-202ENST00000599339 AFF1P51825 1210 aaKnown RBP16.24■□□□□ 0.19
EBI3-202ENST00000599339 OTOP3Q7RTS5 596 aa16.24■□□□□ 0.19
EBI3-202ENST00000599339 DIS3L2Q8IYB7 885 aaKnown RBP16.24■□□□□ 0.19
EBI3-202ENST00000599339 NECAB1Q8N987 351 aa16.24■□□□□ 0.19
EBI3-202ENST00000599339 GAD1Q99259 594 aa16.24■□□□□ 0.19
EBI3-202ENST00000599339 HERC2P3Q9BVR0 1158 aa16.24■□□□□ 0.19
EBI3-202ENST00000599339 EIF2AQ9BY44 585 aaKnown RBP16.24■□□□□ 0.19
EBI3-202ENST00000599339 PRG3Q9Y2Y8 225 aaPredicted RBP16.24■□□□□ 0.19
EBI3-202ENST00000599339 MYO10Q9HD67 2058 aa16.23■□□□□ 0.19
EBI3-202ENST00000599339 BTBD18B2RXH4 712 aa16.23■□□□□ 0.19
EBI3-202ENST00000599339 BRD1O95696 1058 aa16.23■□□□□ 0.19
EBI3-202ENST00000599339 XRCC6P12956 609 aaKnown RBP eCLIP16.23■□□□□ 0.19
EBI3-202ENST00000599339 MLH1P40692 756 aa16.23■□□□□ 0.19
EBI3-202ENST00000599339 RARRES1P49788 294 aa16.23■□□□□ 0.19
EBI3-202ENST00000599339 MBTD1Q05BQ5 628 aa16.23■□□□□ 0.19
EBI3-202ENST00000599339 TCF15Q12870 199 aa16.23■□□□□ 0.19
EBI3-202ENST00000599339 CAPSQ13938 189 aa16.23■□□□□ 0.19
EBI3-202ENST00000599339 ME3Q16798 604 aa16.23■□□□□ 0.19
EBI3-202ENST00000599339 KANK3Q6NY19 840 aa16.23■□□□□ 0.19
EBI3-202ENST00000599339 C15orf39Q6ZRI6 1047 aa16.23■□□□□ 0.19
EBI3-202ENST00000599339 COLGALT2Q8IYK4 626 aa16.23■□□□□ 0.19
EBI3-202ENST00000599339 NSUN7Q8NE18 718 aaKnown RBP16.23■□□□□ 0.19
EBI3-202ENST00000599339 CPB2Q96IY4 423 aa16.23■□□□□ 0.19
EBI3-202ENST00000599339 RPS6KC1Q96S38 1066 aa16.23■□□□□ 0.19
EBI3-202ENST00000599339 NFKBIZQ9BYH8 718 aa16.23■□□□□ 0.19
EBI3-202ENST00000599339 LIMD1Q9UGP4 676 aa16.23■□□□□ 0.19
EBI3-202ENST00000599339 GIT1Q9Y2X7 761 aa16.23■□□□□ 0.19
EBI3-202ENST00000599339 CACNA1HO95180 2353 aa16.22■□□□□ 0.19
EBI3-202ENST00000599339 C2CD2LO14523 706 aa16.22■□□□□ 0.19
EBI3-202ENST00000599339 LILRB3O75022 631 aa16.22■□□□□ 0.19
EBI3-202ENST00000599339 ASGR2P07307 311 aa16.22■□□□□ 0.19
EBI3-202ENST00000599339 ARF4P18085 180 aaPredicted RBP16.22■□□□□ 0.19
EBI3-202ENST00000599339 ARL2P36404 184 aa16.22■□□□□ 0.19
EBI3-202ENST00000599339 GLUD2P49448 558 aa16.22■□□□□ 0.19
EBI3-202ENST00000599339 SCNN1GP51170 649 aa16.22■□□□□ 0.19
EBI3-202ENST00000599339 SAFBQ15424 915 aaKnown RBP eCLIP16.22■□□□□ 0.19
EBI3-202ENST00000599339 CYP26C1Q6V0L0 522 aa16.22■□□□□ 0.19
EBI3-202ENST00000599339 ASAP3Q8TDY4 903 aa16.22■□□□□ 0.19
EBI3-202ENST00000599339 COLEC11Q9BWP8 271 aa16.22■□□□□ 0.19
EBI3-202ENST00000599339 APOL6Q9BWW8 343 aa16.22■□□□□ 0.19
EBI3-202ENST00000599339 MARCH5Q9NX47 278 aa16.22■□□□□ 0.19
EBI3-202ENST00000599339 USO1O60763 962 aaKnown RBP16.21■□□□□ 0.19
EBI3-202ENST00000599339 GLUD1P00367 558 aa16.21■□□□□ 0.19
EBI3-202ENST00000599339 PDGFBP01127 241 aaPredicted RBP16.21■□□□□ 0.19
EBI3-202ENST00000599339 GLRA2P23416 452 aa16.21■□□□□ 0.19
EBI3-202ENST00000599339 NEK4P51957 841 aa16.21■□□□□ 0.19
EBI3-202ENST00000599339 DSC1Q08554 894 aa16.21■□□□□ 0.19
EBI3-202ENST00000599339 AMHR2Q16671 573 aa16.21■□□□□ 0.19
EBI3-202ENST00000599339 SLC27A1Q6PCB7 646 aa16.21■□□□□ 0.19
EBI3-202ENST00000599339 MCPH1Q8NEM0 835 aa16.21■□□□□ 0.19
EBI3-202ENST00000599339 CMASQ8NFW8 434 aaPredicted RBP16.21■□□□□ 0.19
EBI3-202ENST00000599339 POLR3FQ9H1D9 316 aaPredicted RBP16.21■□□□□ 0.19
EBI3-202ENST00000599339 RNF39Q9H2S5 420 aa16.21■□□□□ 0.19
EBI3-202ENST00000599339 MFSD1Q9H3U5 465 aa16.21■□□□□ 0.19
EBI3-202ENST00000599339 NXF3Q9H4D5 531 aaKnown RBP16.21■□□□□ 0.19
EBI3-202ENST00000599339 HES2Q9Y543 173 aa16.21■□□□□ 0.19
EBI3-202ENST00000599339 ZMYM2Q9UBW7 1377 aa16.21■□□□□ 0.19
EBI3-202ENST00000599339 DENND4AQ7Z401 1863 aa16.2■□□□□ 0.18
EBI3-202ENST00000599339 TDRD15B5MCY1 1934 aaKnown RBP16.2■□□□□ 0.18
EBI3-202ENST00000599339 LRRIQ4A6NIV6 560 aa16.2■□□□□ 0.18
EBI3-202ENST00000599339 LARGE1O95461 756 aa16.2■□□□□ 0.18
EBI3-202ENST00000599339 FOSBP53539 338 aa16.2■□□□□ 0.18
EBI3-202ENST00000599339 DSG1Q02413 1049 aa16.2■□□□□ 0.18
EBI3-202ENST00000599339 GRIK3Q13003 919 aa16.2■□□□□ 0.18
EBI3-202ENST00000599339 ZBTB8OSQ8IWT0 167 aa16.2■□□□□ 0.18
EBI3-202ENST00000599339 PIGOQ8TEQ8 1089 aa16.2■□□□□ 0.18
EBI3-202ENST00000599339 STAMQ92783 540 aa16.2■□□□□ 0.18
EBI3-202ENST00000599339 ATOH1Q92858 354 aaPredicted RBP16.2■□□□□ 0.18
EBI3-202ENST00000599339 PRIMPOLQ96LW4 560 aa16.2■□□□□ 0.18
EBI3-202ENST00000599339 ZFP42Q96MM3 310 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms