RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 EHHADHQ08426 723 aa22.34■■□□□ 1.17
PNKP-211ENST00000598020 COASYQ13057 564 aa22.34■■□□□ 1.17
PNKP-211ENST00000598020 CUL4BQ13620 913 aa22.34■■□□□ 1.17
PNKP-211ENST00000598020 FAM117BQ6P1L5 589 aa22.34■■□□□ 1.17
PNKP-211ENST00000598020 ZPBP2Q6X784 338 aa22.34■■□□□ 1.17
PNKP-211ENST00000598020 RSPH1Q8WYR4 309 aa22.34■■□□□ 1.17
PNKP-211ENST00000598020 HVCN1Q96D96 273 aa22.34■■□□□ 1.17
PNKP-211ENST00000598020 CCDC34Q96HJ3 373 aa22.34■■□□□ 1.17
PNKP-211ENST00000598020 ACO2Q99798 780 aaKnown RBP22.34■■□□□ 1.17
PNKP-211ENST00000598020 PDZD7Q9H5P4 517 aa22.34■■□□□ 1.17
PNKP-211ENST00000598020 PTPRHQ9HD43 1115 aa22.34■■□□□ 1.17
PNKP-211ENST00000598020 TBX20Q9UMR3 447 aa22.34■■□□□ 1.17
PNKP-211ENST00000598020 TNFSF13BQ9Y275 285 aa22.34■■□□□ 1.17
PNKP-211ENST00000598020 HOXA2O43364 376 aa22.33■■□□□ 1.17
PNKP-211ENST00000598020 FXR1P51114 621 aaKnown RBP eCLIP22.33■■□□□ 1.17
PNKP-211ENST00000598020 ALCAMQ13740 583 aa22.33■■□□□ 1.17
PNKP-211ENST00000598020 ATF7IP2Q5U623 682 aa22.33■■□□□ 1.17
PNKP-211ENST00000598020 GRAMD1CQ8IYS0 662 aa22.33■■□□□ 1.17
PNKP-211ENST00000598020 PGBD4Q96DM1 585 aa22.33■■□□□ 1.17
PNKP-211ENST00000598020 YME1L1Q96TA2 773 aa22.33■■□□□ 1.17
PNKP-211ENST00000598020 EIF2AQ9BY44 585 aaKnown RBP22.33■■□□□ 1.17
PNKP-211ENST00000598020 BLZF1Q9H2G9 400 aa22.33■■□□□ 1.17
PNKP-211ENST00000598020 MRPL44Q9H9J2 332 aaKnown RBP22.33■■□□□ 1.17
PNKP-211ENST00000598020 PIGRP01833 764 aa22.32■■□□□ 1.16
PNKP-211ENST00000598020 MYOGP15173 224 aa22.32■■□□□ 1.16
PNKP-211ENST00000598020 PROZP22891 400 aa22.32■■□□□ 1.16
PNKP-211ENST00000598020 CASP1P29466 404 aa22.32■■□□□ 1.16
PNKP-211ENST00000598020 MAP4K3Q8IVH8 894 aa22.32■■□□□ 1.16
PNKP-211ENST00000598020 ELOA2Q8IYF1 753 aaPredicted RBP22.32■■□□□ 1.16
PNKP-211ENST00000598020 SMG8Q8ND04 991 aaKnown RBP22.32■■□□□ 1.16
PNKP-211ENST00000598020 TIFAQ96CG3 184 aa22.32■■□□□ 1.16
PNKP-211ENST00000598020 LRCH3Q96II8 777 aa22.32■■□□□ 1.16
PNKP-211ENST00000598020 GBP4Q96PP9 640 aa22.32■■□□□ 1.16
PNKP-211ENST00000598020 RNF19AQ9NV58 838 aa22.32■■□□□ 1.16
PNKP-211ENST00000598020 USP20Q9Y2K6 914 aa22.32■■□□□ 1.16
PNKP-211ENST00000598020 FNDC1Q4ZHG4 1894 aaPredicted RBP22.32■■□□□ 1.16
PNKP-211ENST00000598020 KLRC4O43908 158 aa22.31■■□□□ 1.16
PNKP-211ENST00000598020 PRPF40AO75400 957 aaKnown RBP22.31■■□□□ 1.16
PNKP-211ENST00000598020 TMEM132AQ24JP5 1023 aa22.31■■□□□ 1.16
PNKP-211ENST00000598020 DCAF4L1Q3SXM0 396 aa22.31■■□□□ 1.16
PNKP-211ENST00000598020 EEF1DP3Q658K8 133 aa22.31■■□□□ 1.16
PNKP-211ENST00000598020 APBB1IPQ7Z5R6 666 aaPredicted RBP22.31■■□□□ 1.16
PNKP-211ENST00000598020 CDR2LQ86X02 465 aaPredicted RBP22.31■■□□□ 1.16
PNKP-211ENST00000598020 CMTR2Q8IYT2 770 aaKnown RBP22.31■■□□□ 1.16
PNKP-211ENST00000598020 ADPGKQ9BRR6 497 aa22.31■■□□□ 1.16
PNKP-211ENST00000598020 TARS2Q9BW92 718 aaKnown RBP22.31■■□□□ 1.16
PNKP-211ENST00000598020 IPPQ9Y573 584 aa22.31■■□□□ 1.16
PNKP-211ENST00000598020 PCDHB13Q9Y5F0 798 aa22.31■■□□□ 1.16
PNKP-211ENST00000598020 ABLIM1O14639 778 aa22.3■■□□□ 1.16
PNKP-211ENST00000598020 TOM1L1O75674 476 aa22.3■■□□□ 1.16
PNKP-211ENST00000598020 NPTXRO95502 500 aa22.3■■□□□ 1.16
PNKP-211ENST00000598020 CA3P07451 260 aa22.3■■□□□ 1.16
PNKP-211ENST00000598020 DPYDQ12882 1025 aa22.3■■□□□ 1.16
PNKP-211ENST00000598020 ZC2HC1CQ53FD0 456 aaPredicted RBP22.3■■□□□ 1.16
PNKP-211ENST00000598020 TRIM6Q9C030 488 aaPredicted RBP22.3■■□□□ 1.16
PNKP-211ENST00000598020 TMEM117Q9H0C3 514 aa22.3■■□□□ 1.16
PNKP-211ENST00000598020 NKX2-4Q9H2Z4 354 aa22.3■■□□□ 1.16
PNKP-211ENST00000598020 UBN1Q9NPG3 1134 aa22.3■■□□□ 1.16
PNKP-211ENST00000598020 TBC1D7Q9P0N9 293 aa22.3■■□□□ 1.16
PNKP-211ENST00000598020 ZMYM2Q9UBW7 1377 aa22.29■■□□□ 1.16
PNKP-211ENST00000598020 LCHNA4D1U4 455 aa22.29■■□□□ 1.16
PNKP-211ENST00000598020 NR1I2O75469 434 aa22.29■■□□□ 1.16
PNKP-211ENST00000598020 FGFR1P11362 822 aa22.29■■□□□ 1.16
PNKP-211ENST00000598020 CLLU1OSQ5K130 101 aa22.29■■□□□ 1.16
PNKP-211ENST00000598020 FAM26FQ5R3K3 315 aa22.29■■□□□ 1.16
PNKP-211ENST00000598020 L1TD1Q5T7N2 865 aaKnown RBP22.29■■□□□ 1.16
PNKP-211ENST00000598020 MPZL3Q6UWV2 235 aa22.29■■□□□ 1.16
PNKP-211ENST00000598020 AGMOQ6ZNB7 445 aa22.29■■□□□ 1.16
PNKP-211ENST00000598020 HACE1Q8IYU2 909 aa22.29■■□□□ 1.16
PNKP-211ENST00000598020 CASD1Q96PB1 797 aa22.29■■□□□ 1.16
PNKP-211ENST00000598020 SLC28A3Q9HAS3 691 aa22.29■■□□□ 1.16
PNKP-211ENST00000598020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.28■■□□□ 1.16
PNKP-211ENST00000598020 LINC01553A4QN01 128 aa22.28■■□□□ 1.16
PNKP-211ENST00000598020 INPPL1O15357 1258 aa22.28■■□□□ 1.16
PNKP-211ENST00000598020 GCNT3O95395 438 aa22.28■■□□□ 1.16
PNKP-211ENST00000598020 PRR29P0C7W0 189 aa22.28■■□□□ 1.16
PNKP-211ENST00000598020 MCF2P10911 925 aa22.28■■□□□ 1.16
PNKP-211ENST00000598020 ITGA4P13612 1032 aa22.28■■□□□ 1.16
PNKP-211ENST00000598020 IBSPP21815 317 aaPredicted RBP22.28■■□□□ 1.16
PNKP-211ENST00000598020 CASP5P51878 434 aa22.28■■□□□ 1.16
PNKP-211ENST00000598020 TAP1Q03518 808 aa22.28■■□□□ 1.16
PNKP-211ENST00000598020 PSMD2Q13200 908 aa22.28■■□□□ 1.16
PNKP-211ENST00000598020 BTG3Q14201 252 aaPredicted RBP22.28■■□□□ 1.16
PNKP-211ENST00000598020 POSTNQ15063 836 aa22.28■■□□□ 1.16
PNKP-211ENST00000598020 STXBP4Q6ZWJ1 553 aa22.28■■□□□ 1.16
PNKP-211ENST00000598020 EPM2AIP1Q7L775 607 aaPredicted RBP22.28■■□□□ 1.16
PNKP-211ENST00000598020 RNF169Q8NCN4 708 aa22.28■■□□□ 1.16
PNKP-211ENST00000598020 LPPQ93052 612 aa22.28■■□□□ 1.16
PNKP-211ENST00000598020 ACCSQ96QU6 501 aa22.28■■□□□ 1.16
PNKP-211ENST00000598020 FGFBP2Q9BYJ0 223 aa22.28■■□□□ 1.16
PNKP-211ENST00000598020 CDT1Q9H211 546 aa22.28■■□□□ 1.16
PNKP-211ENST00000598020 MEIS3P2A8K0S8 358 aa22.27■■□□□ 1.16
PNKP-211ENST00000598020 EIF3DO15371 548 aaKnown RBP eCLIP22.27■■□□□ 1.16
PNKP-211ENST00000598020 OFD1O75665 1012 aa22.27■■□□□ 1.16
PNKP-211ENST00000598020 ARHGEF15O94989 841 aa22.27■■□□□ 1.16
PNKP-211ENST00000598020 RPN1P04843 607 aaKnown RBP22.27■■□□□ 1.16
PNKP-211ENST00000598020 MYBP10242 640 aa22.27■■□□□ 1.16
PNKP-211ENST00000598020 GATMP50440 423 aa22.27■■□□□ 1.16
PNKP-211ENST00000598020 MCL1Q07820 350 aa22.27■■□□□ 1.16
PNKP-211ENST00000598020 KMT5BQ4FZB7 885 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms