RNA–Protein interactions for RNA: ENST00000596957.1

ARHGEF1-214, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-214ENST00000596957 PDZD7Q9H5P4 517 aa16.39■□□□□ 0.21
ARHGEF1-214ENST00000596957 C1orf112Q9NSG2 853 aa16.39■□□□□ 0.21
ARHGEF1-214ENST00000596957 LRFN2Q9ULH4 789 aa16.39■□□□□ 0.21
ARHGEF1-214ENST00000596957 TNFSF13BQ9Y275 285 aa16.39■□□□□ 0.21
ARHGEF1-214ENST00000596957 A0A1B0GUA9 196 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 TTLL13PA6NNM8 815 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 TULP1O00294 542 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 CLDN3O15551 220 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 MGEA5O60502 916 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 TOM1L1O75674 476 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 AMHP03971 560 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 EDN1P05305 212 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 SKIP12755 728 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 HOXA11P31270 313 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 RAB27AP51159 221 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 KCNA1Q09470 495 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 MORC3Q14149 939 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 TCTN1Q2MV58 587 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 TMEM240Q5SV17 173 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 MPZL3Q6UWV2 235 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 SLC24A5Q71RS6 500 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 C16orf59Q7L2K0 433 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 HACE1Q8IYU2 909 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 ZNF507Q8TCN5 953 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 NOC3LQ8WTT2 800 aaKnown RBP16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 STRA6Q9BX79 667 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 GBP3Q9H0R5 595 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 RGS18Q9NS28 235 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 RNF216Q9NWF9 866 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 EVPLQ92817 2033 aa16.38■□□□□ 0.21
ARHGEF1-214ENST00000596957 TANC1Q9C0D5 1861 aa16.37■□□□□ 0.21
ARHGEF1-214ENST00000596957 ENPP3O14638 875 aa16.37■□□□□ 0.21
ARHGEF1-214ENST00000596957 LETM1O95202 739 aaPredicted RBP16.37■□□□□ 0.21
ARHGEF1-214ENST00000596957 PPP1R2P41236 205 aa16.37■□□□□ 0.21
ARHGEF1-214ENST00000596957 DSC3Q14574 896 aa16.37■□□□□ 0.21
ARHGEF1-214ENST00000596957 KNOP1Q1ED39 458 aaKnown RBP16.37■□□□□ 0.21
ARHGEF1-214ENST00000596957 DCAF4L1Q3SXM0 396 aa16.37■□□□□ 0.21
ARHGEF1-214ENST00000596957 SLFN12LQ6IEE8 588 aa16.37■□□□□ 0.21
ARHGEF1-214ENST00000596957 ARMCX5Q6P1M9 558 aa16.37■□□□□ 0.21
ARHGEF1-214ENST00000596957 GUF1Q8N442 669 aaKnown RBP16.37■□□□□ 0.21
ARHGEF1-214ENST00000596957 POMGNT1Q8WZA1 660 aa16.37■□□□□ 0.21
ARHGEF1-214ENST00000596957 KCNN1Q92952 543 aa16.37■□□□□ 0.21
ARHGEF1-214ENST00000596957 RNPC3Q96LT9 517 aaKnown RBP16.37■□□□□ 0.21
ARHGEF1-214ENST00000596957 MSTO1Q9BUK6 570 aa16.37■□□□□ 0.21
ARHGEF1-214ENST00000596957 APOL6Q9BWW8 343 aa16.37■□□□□ 0.21
ARHGEF1-214ENST00000596957 TSPYL2Q9H2G4 693 aaPredicted RBP16.37■□□□□ 0.21
ARHGEF1-214ENST00000596957 SLC4A7Q9Y6M7 1214 aa16.37■□□□□ 0.21
ARHGEF1-214ENST00000596957 PSMA7O14818 248 aa16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 UPP2O95045 317 aa16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 PIGRP01833 764 aa16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 PRCPP42785 496 aa16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 WDR5P61964 334 aaKnown RBP16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 NOLC1Q14978 699 aaKnown RBP eCLIP16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 BMT2Q1RMZ1 405 aa16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 EEF1DP3Q658K8 133 aa16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 KLHL10Q6JEL2 608 aa16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 GOLGA5Q8TBA6 731 aa16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 LINC01599Q8WXQ3 324 aa16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 HERVK_113Q902F9 699 aa16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 PGBD4Q96DM1 585 aa16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 VWCEQ96DN2 955 aa16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 ZBTB45Q96K62 511 aaPredicted RBP16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 TSG101Q99816 390 aa16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 EIF2AQ9BY44 585 aaKnown RBP16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 IKZF4Q9H2S9 585 aa16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 FAM105AQ9NUU6 356 aa16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 DACH1Q9UI36 760 aa16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 PCDHB7Q9Y5E2 793 aa16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 PCDHB2Q9Y5E7 798 aa16.36■□□□□ 0.21
ARHGEF1-214ENST00000596957 A0A0U1RQF3 1178 aa16.35■□□□□ 0.21
ARHGEF1-214ENST00000596957 TISP43B9A030 160 aa16.35■□□□□ 0.21
ARHGEF1-214ENST00000596957 ANKRD63C9JTQ0 380 aa16.35■□□□□ 0.21
ARHGEF1-214ENST00000596957 CALUO43852 315 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF1-214ENST00000596957 STAG3L1P0CL83 205 aa16.35■□□□□ 0.21
ARHGEF1-214ENST00000596957 MCF2P10911 925 aa16.35■□□□□ 0.21
ARHGEF1-214ENST00000596957 NLRP12P59046 1061 aa16.35■□□□□ 0.21
ARHGEF1-214ENST00000596957 OSTNP61366 133 aa16.35■□□□□ 0.21
ARHGEF1-214ENST00000596957 UBXN11Q5T124 520 aa16.35■□□□□ 0.21
ARHGEF1-214ENST00000596957 CHRDL2Q6WN34 429 aa16.35■□□□□ 0.21
ARHGEF1-214ENST00000596957 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.35■□□□□ 0.21
ARHGEF1-214ENST00000596957 RTN4RL1Q86UN2 441 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF1-214ENST00000596957 THNSL1Q8IYQ7 743 aa16.35■□□□□ 0.21
ARHGEF1-214ENST00000596957 GDF15Q99988 308 aa16.35■□□□□ 0.21
ARHGEF1-214ENST00000596957 ZBED2Q9BTP6 218 aa16.35■□□□□ 0.21
ARHGEF1-214ENST00000596957 CDT1Q9H211 546 aa16.35■□□□□ 0.21
ARHGEF1-214ENST00000596957 TYW1Q9NV66 732 aaKnown RBP16.35■□□□□ 0.21
ARHGEF1-214ENST00000596957 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.34■□□□□ 0.21
ARHGEF1-214ENST00000596957 C9IYK1 514 aa16.34■□□□□ 0.21
ARHGEF1-214ENST00000596957 CLIC2O15247 247 aa16.34■□□□□ 0.21
ARHGEF1-214ENST00000596957 ITGA4P13612 1032 aa16.34■□□□□ 0.21
ARHGEF1-214ENST00000596957 CYP2J2P51589 502 aa16.34■□□□□ 0.21
ARHGEF1-214ENST00000596957 YARSP54577 528 aaKnown RBP16.34■□□□□ 0.21
ARHGEF1-214ENST00000596957 MCL1Q07820 350 aa16.34■□□□□ 0.21
ARHGEF1-214ENST00000596957 SHHQ15465 462 aa16.34■□□□□ 0.21
ARHGEF1-214ENST00000596957 STX1AQ16623 288 aa16.34■□□□□ 0.21
ARHGEF1-214ENST00000596957 C9orf50Q5SZB4 431 aa16.34■□□□□ 0.21
ARHGEF1-214ENST00000596957 FAM117BQ6P1L5 589 aa16.34■□□□□ 0.21
ARHGEF1-214ENST00000596957 RBM43Q6ZSC3 357 aaKnown RBP16.34■□□□□ 0.21
ARHGEF1-214ENST00000596957 ECHDC2Q86YB7 292 aa16.34■□□□□ 0.21
ARHGEF1-214ENST00000596957 ABI1Q8IZP0 508 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms