RNA–Protein interactions for RNA: ENST00000594693.5

ZNF548-204, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-204ENST00000594693 STK4Q13043 487 aa19.38■□□□□ 0.69
ZNF548-204ENST00000594693 SLC27A1Q6PCB7 646 aa19.38■□□□□ 0.69
ZNF548-204ENST00000594693 MRPL10Q7Z7H8 261 aaKnown RBP19.38■□□□□ 0.69
ZNF548-204ENST00000594693 ZNF598Q86UK7 904 aaKnown RBP19.38■□□□□ 0.69
ZNF548-204ENST00000594693 MAP4K3Q8IVH8 894 aa19.38■□□□□ 0.69
ZNF548-204ENST00000594693 MYOCDQ8IZQ8 938 aa19.38■□□□□ 0.69
ZNF548-204ENST00000594693 GLIS3Q8NEA6 775 aa19.38■□□□□ 0.69
ZNF548-204ENST00000594693 ZNF507Q8TCN5 953 aa19.38■□□□□ 0.69
ZNF548-204ENST00000594693 GPT2Q8TD30 523 aa19.38■□□□□ 0.69
ZNF548-204ENST00000594693 GSDMAQ96QA5 445 aa19.38■□□□□ 0.69
ZNF548-204ENST00000594693 EXOC1Q9NV70 894 aa19.38■□□□□ 0.69
ZNF548-204ENST00000594693 RNF216Q9NWF9 866 aaPredicted RBP19.38■□□□□ 0.69
ZNF548-204ENST00000594693 PCDHB2Q9Y5E7 798 aa19.38■□□□□ 0.69
ZNF548-204ENST00000594693 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.37■□□□□ 0.69
ZNF548-204ENST00000594693 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.37■□□□□ 0.69
ZNF548-204ENST00000594693 ABLIM1O14639 778 aa19.37■□□□□ 0.69
ZNF548-204ENST00000594693 N4BP3O15049 544 aa19.37■□□□□ 0.69
ZNF548-204ENST00000594693 PROZP22891 400 aa19.37■□□□□ 0.69
ZNF548-204ENST00000594693 RAB27AP51159 221 aa19.37■□□□□ 0.69
ZNF548-204ENST00000594693 KCNA1Q09470 495 aa19.37■□□□□ 0.69
ZNF548-204ENST00000594693 L1TD1Q5T7N2 865 aaKnown RBP19.37■□□□□ 0.69
ZNF548-204ENST00000594693 EEF1DP3Q658K8 133 aa19.37■□□□□ 0.69
ZNF548-204ENST00000594693 TMCO2Q7Z6W1 182 aaPredicted RBP19.37■□□□□ 0.69
ZNF548-204ENST00000594693 CDR2LQ86X02 465 aaPredicted RBP19.37■□□□□ 0.69
ZNF548-204ENST00000594693 NPAS4Q8IUM7 802 aa19.37■□□□□ 0.69
ZNF548-204ENST00000594693 HERC6Q8IVU3 1022 aa19.37■□□□□ 0.69
ZNF548-204ENST00000594693 CCDC47Q96A33 483 aaKnown RBP19.37■□□□□ 0.69
ZNF548-204ENST00000594693 ACCSQ96QU6 501 aa19.37■□□□□ 0.69
ZNF548-204ENST00000594693 EIF2AQ9BY44 585 aaKnown RBP19.37■□□□□ 0.69
ZNF548-204ENST00000594693 SLC39A2Q9NP94 309 aa19.37■□□□□ 0.69
ZNF548-204ENST00000594693 TMEM161AQ9NX61 479 aa19.37■□□□□ 0.69
ZNF548-204ENST00000594693 PCDHB7Q9Y5E2 793 aa19.37■□□□□ 0.69
ZNF548-204ENST00000594693 EIF3DO15371 548 aaKnown RBP eCLIP19.36■□□□□ 0.69
ZNF548-204ENST00000594693 TOM1L1O75674 476 aa19.36■□□□□ 0.69
ZNF548-204ENST00000594693 PRPF6O94906 941 aaKnown RBP19.36■□□□□ 0.69
ZNF548-204ENST00000594693 SMC2O95347 1197 aa19.36■□□□□ 0.69
ZNF548-204ENST00000594693 GJB5O95377 273 aa19.36■□□□□ 0.69
ZNF548-204ENST00000594693 STAG3L1P0CL83 205 aa19.36■□□□□ 0.69
ZNF548-204ENST00000594693 ATF7P17544 494 aaPredicted RBP19.36■□□□□ 0.69
ZNF548-204ENST00000594693 HOXD13P35453 343 aa19.36■□□□□ 0.69
ZNF548-204ENST00000594693 TMEM132AQ24JP5 1023 aa19.36■□□□□ 0.69
ZNF548-204ENST00000594693 LRIT3Q3SXY7 679 aa19.36■□□□□ 0.69
ZNF548-204ENST00000594693 FAM109BQ6ICB4 259 aaPredicted RBP19.36■□□□□ 0.69
ZNF548-204ENST00000594693 STXBP4Q6ZWJ1 553 aa19.36■□□□□ 0.69
ZNF548-204ENST00000594693 SMG8Q8ND04 991 aaKnown RBP19.36■□□□□ 0.69
ZNF548-204ENST00000594693 SCFD1Q8WVM8 642 aa19.36■□□□□ 0.69
ZNF548-204ENST00000594693 ERCC4Q92889 916 aaPredicted RBP19.36■□□□□ 0.69
ZNF548-204ENST00000594693 GRXCR1A8MXD5 290 aa19.35■□□□□ 0.69
ZNF548-204ENST00000594693 UPP2O95045 317 aa19.35■□□□□ 0.69
ZNF548-204ENST00000594693 HTRA4P83105 476 aaPredicted RBP19.35■□□□□ 0.69
ZNF548-204ENST00000594693 BMT2Q1RMZ1 405 aa19.35■□□□□ 0.69
ZNF548-204ENST00000594693 KIAA0895Q8NCT3 520 aa19.35■□□□□ 0.69
ZNF548-204ENST00000594693 SMARCE1Q969G3 411 aa19.35■□□□□ 0.69
ZNF548-204ENST00000594693 ZBTB45Q96K62 511 aaPredicted RBP19.35■□□□□ 0.69
ZNF548-204ENST00000594693 CLSTN2Q9H4D0 955 aa19.35■□□□□ 0.69
ZNF548-204ENST00000594693 TMEM206Q9H813 350 aa19.35■□□□□ 0.69
ZNF548-204ENST00000594693 RMND1Q9NWS8 449 aa19.35■□□□□ 0.69
ZNF548-204ENST00000594693 LRFN2Q9ULH4 789 aa19.35■□□□□ 0.69
ZNF548-204ENST00000594693 EXOC7Q9UPT5 735 aa19.35■□□□□ 0.69
ZNF548-204ENST00000594693 IPPQ9Y573 584 aa19.35■□□□□ 0.69
ZNF548-204ENST00000594693 STYXL1Q9Y6J8 313 aa19.35■□□□□ 0.69
ZNF548-204ENST00000594693 TTC3P53804 2025 aa19.35■□□□□ 0.69
ZNF548-204ENST00000594693 MICAL3Q7RTP6 2002 aa19.35■□□□□ 0.69
ZNF548-204ENST00000594693 ANKRD63C9JTQ0 380 aa19.34■□□□□ 0.69
ZNF548-204ENST00000594693 DGKIO75912 1065 aa19.34■□□□□ 0.69
ZNF548-204ENST00000594693 NPTXRO95502 500 aa19.34■□□□□ 0.69
ZNF548-204ENST00000594693 LIG4P49917 911 aa19.34■□□□□ 0.69
ZNF548-204ENST00000594693 MCL1Q07820 350 aa19.34■□□□□ 0.69
ZNF548-204ENST00000594693 CAMK4Q16566 473 aa19.34■□□□□ 0.69
ZNF548-204ENST00000594693 SLC39A4Q6P5W5 647 aa19.34■□□□□ 0.69
ZNF548-204ENST00000594693 MPZL3Q6UWV2 235 aa19.34■□□□□ 0.69
ZNF548-204ENST00000594693 ZNF689Q96CS4 500 aaPredicted RBP19.34■□□□□ 0.69
ZNF548-204ENST00000594693 BICD1Q96G01 975 aa19.34■□□□□ 0.69
ZNF548-204ENST00000594693 RAD9AQ99638 391 aa19.34■□□□□ 0.69
ZNF548-204ENST00000594693 ADPGKQ9BRR6 497 aa19.34■□□□□ 0.69
ZNF548-204ENST00000594693 TCHPQ9BT92 498 aa19.34■□□□□ 0.69
ZNF548-204ENST00000594693 HAPLN2Q9GZV7 340 aa19.34■□□□□ 0.69
ZNF548-204ENST00000594693 IKZF4Q9H2S9 585 aa19.34■□□□□ 0.69
ZNF548-204ENST00000594693 RNF19AQ9NV58 838 aa19.34■□□□□ 0.69
ZNF548-204ENST00000594693 HNRNPDLO14979 420 aaKnown RBP19.33■□□□□ 0.68
ZNF548-204ENST00000594693 CLDN3O15551 220 aa19.33■□□□□ 0.68
ZNF548-204ENST00000594693 MBD3O95983 291 aa19.33■□□□□ 0.68
ZNF548-204ENST00000594693 MCF2P10911 925 aa19.33■□□□□ 0.68
ZNF548-204ENST00000594693 RABGGTBP53611 331 aa19.33■□□□□ 0.68
ZNF548-204ENST00000594693 DCAF4L1Q3SXM0 396 aa19.33■□□□□ 0.68
ZNF548-204ENST00000594693 FAM117BQ6P1L5 589 aa19.33■□□□□ 0.68
ZNF548-204ENST00000594693 AGMOQ6ZNB7 445 aa19.33■□□□□ 0.68
ZNF548-204ENST00000594693 APBB1IPQ7Z5R6 666 aaPredicted RBP19.33■□□□□ 0.68
ZNF548-204ENST00000594693 PGBD4Q96DM1 585 aa19.33■□□□□ 0.68
ZNF548-204ENST00000594693 TRIM6Q9C030 488 aaPredicted RBP19.33■□□□□ 0.68
ZNF548-204ENST00000594693 CDT1Q9H211 546 aa19.33■□□□□ 0.68
ZNF548-204ENST00000594693 RNF39Q9H2S5 420 aa19.33■□□□□ 0.68
ZNF548-204ENST00000594693 RC3H2Q9HBD1 1191 aaKnown RBP19.33■□□□□ 0.68
ZNF548-204ENST00000594693 KIAA1468Q9P260 1216 aa19.33■□□□□ 0.68
ZNF548-204ENST00000594693 HES2Q9Y543 173 aa19.33■□□□□ 0.68
ZNF548-204ENST00000594693 INSL6Q9Y581 213 aa19.33■□□□□ 0.68
ZNF548-204ENST00000594693 LAMA2P24043 3122 aaKnown RBP19.33■□□□□ 0.68
ZNF548-204ENST00000594693 UBE4BO95155 1302 aa19.32■□□□□ 0.68
ZNF548-204ENST00000594693 A0A0B4J269 797 aa19.32■□□□□ 0.68
ZNF548-204ENST00000594693 MEIS3P2A8K0S8 358 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms