RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 ZNF662Q6ZS27 426 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 RIOX2Q8IUF8 465 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 CD302Q8IX05 232 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 ANKRD35Q8N283 1001 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 EHBP1Q8NDI1 1231 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 JAKMIP2Q96AA8 810 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 OPTNQ96CV9 577 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 STAMBPL1Q96FJ0 436 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 CCDC42Q96M95 316 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 ZIM3Q96PE6 472 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 SPATC1LQ9H0A9 340 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 ASCC2Q9H1I8 757 aaPredicted RBP16.62■□□□□ 0.25
PNKP-204ENST00000594661 DBR1Q9UK59 544 aaKnown RBP16.62■□□□□ 0.25
PNKP-204ENST00000594661 PDXKO00764 312 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 ENC1O14682 589 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 SRGAP2O75044 1071 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 PLEKP08567 350 aaPredicted RBP16.61■□□□□ 0.25
PNKP-204ENST00000594661 HNRNPH3P31942 346 aaKnown RBP16.61■□□□□ 0.25
PNKP-204ENST00000594661 YWHABP31946 246 aaKnown RBP16.61■□□□□ 0.25
PNKP-204ENST00000594661 SFNP31947 248 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 MYO1EQ12965 1108 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 MKRN4PQ13434 485 aaPredicted RBP16.61■□□□□ 0.25
PNKP-204ENST00000594661 MOGSQ13724 837 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 SLC30A9Q6PML9 568 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 RRAGAQ7L523 313 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 MAEAQ7L5Y9 396 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 TRMT1LQ7Z2T5 733 aaKnown RBP16.61■□□□□ 0.25
PNKP-204ENST00000594661 KSR1Q8IVT5 923 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 TRIM59Q8IWR1 403 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 MAF1Q9H063 256 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 R3HDMLQ9H3Y0 253 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 TYW1Q9NV66 732 aaKnown RBP16.61■□□□□ 0.25
PNKP-204ENST00000594661 TCEAL9Q9UHQ7 104 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 PCDHGC5Q9Y5F6 944 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.61■□□□□ 0.25
PNKP-204ENST00000594661 MYH11P35749 1972 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 LRRC53A6NM62 1247 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 PDE2AO00408 941 aaPredicted RBP16.61■□□□□ 0.25
PNKP-204ENST00000594661 CETN3O15182 167 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 EIF3DO15371 548 aaKnown RBP eCLIP16.61■□□□□ 0.25
PNKP-204ENST00000594661 MAFGO15525 162 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 KRT86O43790 486 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 CNMDO75829 334 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 POTEJP0CG39 1038 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 CYP27A1Q02318 531 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 KCNMA1Q12791 1236 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 GLE1Q53GS7 698 aaKnown RBP16.61■□□□□ 0.25
PNKP-204ENST00000594661 ODR4Q5SWX8 454 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 ZNF746Q6NUN9 644 aaPredicted RBP16.61■□□□□ 0.25
PNKP-204ENST00000594661 CACNA2D4Q7Z3S7 1137 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 FAM178BQ8IXR5 827 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 C4orf19Q8IY42 314 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 MOV10L1Q9BXT6 1211 aaKnown RBP16.61■□□□□ 0.25
PNKP-204ENST00000594661 SEL1LQ9UBV2 794 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 AGTPBP1Q9UPW5 1226 aa16.61■□□□□ 0.25
PNKP-204ENST00000594661 ANO9A1A5B4 782 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 A6NHS1 94 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 BACH1O14867 736 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 TGFB1I1O43294 461 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 CALUO43852 315 aaPredicted RBP16.6■□□□□ 0.25
PNKP-204ENST00000594661 PSMC5P62195 406 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 SPA17Q15506 151 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 ZNF720Q7Z2F6 126 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 TRIM74Q86UV6 250 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 TRIM73Q86UV7 250 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 NCAPG2Q86XI2 1143 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 IQCKQ8N0W5 287 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 CAPZA3Q96KX2 299 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 SENP7Q9BQF6 1050 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 ARHGAP20Q9P2F6 1191 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 IQCA1LA6NCM1 817 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 C5orf60A6NFR6 353 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 E7EVH7 732 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 SORBS3O60504 671 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 USO1O60763 962 aaKnown RBP16.6■□□□□ 0.25
PNKP-204ENST00000594661 NR3C1P04150 777 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 FERP16591 822 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 GJA5P36382 358 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 BLMHQ13867 455 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 CCDC181Q5TID7 509 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 PLA2G4FQ68DD2 849 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 KCTD16Q68DU8 428 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 ARMC9Q7Z3E5 817 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 GPIHBP1Q8IV16 184 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 ZNF513Q8N8E2 541 aaPredicted RBP16.6■□□□□ 0.25
PNKP-204ENST00000594661 BAP1Q92560 729 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 LACRTQ9GZZ8 138 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 PCDHA10Q9Y5I2 948 aa16.6■□□□□ 0.25
PNKP-204ENST00000594661 PFASO15067 1338 aa16.59■□□□□ 0.25
PNKP-204ENST00000594661 RCCD1A6NED2 376 aa16.59■□□□□ 0.25
PNKP-204ENST00000594661 SPATA31C2B4DYI2 1134 aa16.59■□□□□ 0.25
PNKP-204ENST00000594661 CLIC2O15247 247 aa16.59■□□□□ 0.25
PNKP-204ENST00000594661 STAM2O75886 525 aa16.59■□□□□ 0.25
PNKP-204ENST00000594661 SP4Q02446 784 aa16.59■□□□□ 0.25
PNKP-204ENST00000594661 C2orf54Q08AI8 447 aa16.59■□□□□ 0.25
PNKP-204ENST00000594661 MTA1Q13330 715 aa16.59■□□□□ 0.25
PNKP-204ENST00000594661 DNERQ8NFT8 737 aa16.59■□□□□ 0.25
PNKP-204ENST00000594661 RDM1Q8NG50 284 aa16.59■□□□□ 0.25
PNKP-204ENST00000594661 CAGE1Q8TC20 777 aa16.59■□□□□ 0.25
PNKP-204ENST00000594661 IWS1Q96ST2 819 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms