RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 A0A1W2PQ64 194 aa21.56■■□□□ 1.04
LSM4-203ENST00000593829 A0A1W2PQD8 194 aa21.56■■□□□ 1.04
LSM4-203ENST00000593829 ACKR2O00590 384 aa21.56■■□□□ 1.04
LSM4-203ENST00000593829 SLC16A4O15374 487 aa21.56■■□□□ 1.04
LSM4-203ENST00000593829 B4GALT5O43286 388 aa21.56■■□□□ 1.04
LSM4-203ENST00000593829 EOMESO95936 686 aa21.56■■□□□ 1.04
LSM4-203ENST00000593829 SP7Q8TDD2 431 aaPredicted RBP21.56■■□□□ 1.04
LSM4-203ENST00000593829 ZNF576Q9H609 170 aa21.56■■□□□ 1.04
LSM4-203ENST00000593829 TMEM134Q9H6X4 195 aa21.56■■□□□ 1.04
LSM4-203ENST00000593829 MAGEF1Q9HAY2 307 aa21.56■■□□□ 1.04
LSM4-203ENST00000593829 KBTBD4Q9NVX7 518 aa21.56■■□□□ 1.04
LSM4-203ENST00000593829 CNTNAP2Q9UHC6 1331 aa21.56■■□□□ 1.04
LSM4-203ENST00000593829 PFKFB1P16118 471 aa21.55■■□□□ 1.04
LSM4-203ENST00000593829 AMPD3Q01432 767 aa21.55■■□□□ 1.04
LSM4-203ENST00000593829 PRPF4BQ13523 1007 aaKnown RBP21.55■■□□□ 1.04
LSM4-203ENST00000593829 KIAA1524Q8TCG1 905 aa21.55■■□□□ 1.04
LSM4-203ENST00000593829 ZNF689Q96CS4 500 aaPredicted RBP21.55■■□□□ 1.04
LSM4-203ENST00000593829 RC3H2Q9HBD1 1191 aaKnown RBP21.55■■□□□ 1.04
LSM4-203ENST00000593829 A0A1B0GUA9 196 aa21.55■■□□□ 1.04
LSM4-203ENST00000593829 H0YCG3 227 aa21.55■■□□□ 1.04
LSM4-203ENST00000593829 ZNF623O75123 536 aa21.55■■□□□ 1.04
LSM4-203ENST00000593829 ZNF598Q86UK7 904 aaKnown RBP21.55■■□□□ 1.04
LSM4-203ENST00000593829 RNF169Q8NCN4 708 aa21.55■■□□□ 1.04
LSM4-203ENST00000593829 DNAJC19Q96DA6 116 aa21.55■■□□□ 1.04
LSM4-203ENST00000593829 TTYH1Q9H313 450 aaPredicted RBP21.55■■□□□ 1.04
LSM4-203ENST00000593829 SEMA6BQ9H3T3 888 aa21.55■■□□□ 1.04
LSM4-203ENST00000593829 HPSEQ9Y251 543 aa21.55■■□□□ 1.04
LSM4-203ENST00000593829 PCDHB2Q9Y5E7 798 aa21.55■■□□□ 1.04
LSM4-203ENST00000593829 GOLGA6L6A8MZA4 724 aa21.54■■□□□ 1.04
LSM4-203ENST00000593829 HOXA2O43364 376 aa21.54■■□□□ 1.04
LSM4-203ENST00000593829 TAP1Q03518 808 aa21.54■■□□□ 1.04
LSM4-203ENST00000593829 TMEM132AQ24JP5 1023 aa21.54■■□□□ 1.04
LSM4-203ENST00000593829 TPRNQ4KMQ1 711 aa21.54■■□□□ 1.04
LSM4-203ENST00000593829 UBXN11Q5T124 520 aa21.54■■□□□ 1.04
LSM4-203ENST00000593829 DEFB123Q8N688 67 aa21.54■■□□□ 1.04
LSM4-203ENST00000593829 TMEM161BQ8NDZ6 487 aa21.54■■□□□ 1.04
LSM4-203ENST00000593829 STAMQ92783 540 aa21.54■■□□□ 1.04
LSM4-203ENST00000593829 FAM237AA0A1B0GTK4 181 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 LINC01553A4QN01 128 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 GOLGA6L4A6NEF3 574 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 NCKAP1LP55160 1127 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 BTG3Q14201 252 aaPredicted RBP21.53■■□□□ 1.04
LSM4-203ENST00000593829 SLC27A1Q6PCB7 646 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 Q7L0L9 218 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 CEP57L1Q8IYX8 460 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 FSIP1Q8NA03 581 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 MRPS27Q92552 414 aaKnown RBP21.53■■□□□ 1.04
LSM4-203ENST00000593829 MYH11P35749 1972 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 TTLL13PA6NNM8 815 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 N4BP3O15049 544 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 ARHGEF15O94989 841 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 CCDC192P0DO97 292 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 MAPTP10636 758 aaKnown RBP21.53■■□□□ 1.04
LSM4-203ENST00000593829 FGFR1P11362 822 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 ATF7P17544 494 aaPredicted RBP21.53■■□□□ 1.04
LSM4-203ENST00000593829 SCP2P22307 547 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 FAM178BQ8IXR5 827 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 CMTR2Q8IYT2 770 aaKnown RBP21.53■■□□□ 1.04
LSM4-203ENST00000593829 FIBCD1Q8N539 461 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 CNNM3Q8NE01 707 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 PGBD4Q96DM1 585 aa21.53■■□□□ 1.04
LSM4-203ENST00000593829 ZNF830Q96NB3 372 aaPredicted RBP21.53■■□□□ 1.04
LSM4-203ENST00000593829 SZT2Q5T011 3432 aa21.52■■□□□ 1.04
LSM4-203ENST00000593829 SLFN14P0C7P3 912 aa21.52■■□□□ 1.04
LSM4-203ENST00000593829 IDEP14735 1019 aa21.52■■□□□ 1.04
LSM4-203ENST00000593829 GAP43P17677 238 aa21.52■■□□□ 1.04
LSM4-203ENST00000593829 GATMP50440 423 aa21.52■■□□□ 1.04
LSM4-203ENST00000593829 STRN3Q13033 797 aa21.52■■□□□ 1.04
LSM4-203ENST00000593829 TAS1R3Q7RTX0 852 aa21.52■■□□□ 1.04
LSM4-203ENST00000593829 HAUS6Q7Z4H7 955 aa21.52■■□□□ 1.04
LSM4-203ENST00000593829 MRPL10Q7Z7H8 261 aaKnown RBP21.52■■□□□ 1.04
LSM4-203ENST00000593829 CDR2LQ86X02 465 aaPredicted RBP21.52■■□□□ 1.04
LSM4-203ENST00000593829 SLC17A8Q8NDX2 589 aa21.52■■□□□ 1.04
LSM4-203ENST00000593829 FAM161BQ96MY7 647 aa21.52■■□□□ 1.04
LSM4-203ENST00000593829 EIF2AQ9BY44 585 aaKnown RBP21.52■■□□□ 1.04
LSM4-203ENST00000593829 MRPL4Q9BYD3 311 aaKnown RBP21.52■■□□□ 1.04
LSM4-203ENST00000593829 TRIM6Q9C030 488 aaPredicted RBP21.52■■□□□ 1.04
LSM4-203ENST00000593829 COL4A6Q14031 1691 aa21.52■■□□□ 1.04
LSM4-203ENST00000593829 EDN1P05305 212 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 SYKP43405 635 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 NDUFA8P51970 172 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 NT5DC1Q5TFE4 455 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 ABI1Q8IZP0 508 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 KCNN1Q92952 543 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 TRIM9Q9C026 710 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 TMEM117Q9H0C3 514 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 PDZD7Q9H5P4 517 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 RNF19AQ9NV58 838 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 SEL1LQ9UBV2 794 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 SERTAD1Q9UHV2 236 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 USP20Q9Y2K6 914 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 TBKBP1A7MCY6 615 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 K7ENM7 598 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 PAN2Q504Q3 1202 aaKnown RBP21.51■■□□□ 1.03
LSM4-203ENST00000593829 ATF7IP2Q5U623 682 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 SFR1Q86XK3 245 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 LPPQ93052 612 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 TGS1Q96RS0 853 aaKnown RBP21.51■■□□□ 1.03
LSM4-203ENST00000593829 C7orf25Q9BPX7 421 aa21.51■■□□□ 1.03
LSM4-203ENST00000593829 ADPGKQ9BRR6 497 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms